Enrichment of novel Verrucomicrobia, Bacteroidetes, and Krumholzibacteria in an oxygen‐limited methane‐ and iron‐fed bioreactor inoculated with Bothnian Sea sediments

Bibliographic Details
Title: Enrichment of novel Verrucomicrobia, Bacteroidetes, and Krumholzibacteria in an oxygen‐limited methane‐ and iron‐fed bioreactor inoculated with Bothnian Sea sediments
Authors: Paula Dalcin Martins, Anniek deJong, Wytze K. Lenstra, Niels A. G. M. vanHelmond, Caroline P. Slomp, Mike S. M. Jetten, Cornelia U. Welte, Olivia Rasigraf
Source: MicrobiologyOpen, Vol 10, Iss 1, Pp n/a-n/a (2021)
Publisher Information: Wiley, 2021.
Publication Year: 2021
Collection: LCC:Microbiology
Subject Terms: Bothnian Sea, coastal sediments, iron cycling, low oxygen, methane oxidation, methanotrophs, Microbiology, QR1-502
More Details: Abstract Microbial methane oxidation is a major biofilter preventing larger emissions of this powerful greenhouse gas from marine coastal areas into the atmosphere. In these zones, various electron acceptors such as sulfate, metal oxides, nitrate, or oxygen can be used. However, the key microbial players and mechanisms of methane oxidation are poorly understood. In this study, we inoculated a bioreactor with methane‐ and iron‐rich sediments from the Bothnian Sea to investigate microbial methane and iron cycling under low oxygen concentrations. Using metagenomics, we investigated shifts in microbial community composition after approximately 2.5 years of bioreactor operation. Marker genes for methane and iron cycling, as well as respiratory and fermentative metabolism, were identified and used to infer putative microbial metabolism. Metagenome‐assembled genomes representing novel Verrucomicrobia, Bacteroidetes, and Krumholzibacteria were recovered and revealed a potential for methane oxidation, organic matter degradation, and iron cycling, respectively. This work brings new hypotheses on the identity and metabolic versatility of microorganisms that may be members of such functional guilds in coastal marine sediments and highlights that microorganisms potentially composing the methane biofilter in these sediments may be more diverse than previously appreciated.
Document Type: article
File Description: electronic resource
Language: English
ISSN: 2045-8827
Relation: https://doaj.org/toc/2045-8827
DOI: 10.1002/mbo3.1175
Access URL: https://doaj.org/article/afa942d1036a40148b0ef10622ae65a0
Accession Number: edsdoj.fa942d1036a40148b0ef10622ae65a0
Database: Directory of Open Access Journals
More Details
ISSN:20458827
DOI:10.1002/mbo3.1175
Published in:MicrobiologyOpen
Language:English