Comparative Transcriptomic Analysis of Gene Expression Inheritance Patterns Associated with Cabbage Head Heterosis

Bibliographic Details
Title: Comparative Transcriptomic Analysis of Gene Expression Inheritance Patterns Associated with Cabbage Head Heterosis
Authors: Shengjuan Li, Charitha P. A. Jayasinghege, Jia Guo, Enhui Zhang, Xingli Wang, Zhongmin Xu
Source: Plants, Vol 10, Iss 2, p 275 (2021)
Publisher Information: MDPI AG, 2021.
Publication Year: 2021
Collection: LCC:Botany
Subject Terms: Brassica oleracea L. var. capitata, heterosis, transcriptomics, allele-specific expression, cis-and trans-regulation, Botany, QK1-989
More Details: The molecular mechanism of heterosis or hybrid vigor, where F1 hybrids of genetically diverse parents show superior traits compared to their parents, is not well understood. Here, we studied the molecular regulation of heterosis in four F1 cabbage hybrids that showed heterosis for several horticultural traits, including head size and weight. To examine the molecular mechanisms, we performed a global transcriptome profiling in the hybrids and their parents by RNA sequencing. The proportion of genetic variations detected as single nucleotide polymorphisms and small insertion–deletions as well as the numbers of differentially expressed genes indicated a larger role of the female parent than the male parent in the genetic divergence of the hybrids. More than 86% of hybrid gene expressions were non-additive. More than 81% of the genes showing divergent expressions showed dominant inheritance, and more than 56% of these exhibited maternal expression dominance. Gene expression regulation by cis-regulatory mechanisms appears to mediate most of the gene expression divergence in the hybrids; however, trans-regulatory factors appear to have a higher effect compared to cis-regulatory factors on parental expression divergence. These observations bring new insights into the molecular mechanisms of heterosis during the cabbage head development.
Document Type: article
File Description: electronic resource
Language: English
ISSN: 2223-7747
Relation: https://www.mdpi.com/2223-7747/10/2/275; https://doaj.org/toc/2223-7747
DOI: 10.3390/plants10020275
Access URL: https://doaj.org/article/9b7dc20253c84c9492759e0e6cbc6f9a
Accession Number: edsdoj.9b7dc20253c84c9492759e0e6cbc6f9a
Database: Directory of Open Access Journals
More Details
ISSN:22237747
DOI:10.3390/plants10020275
Published in:Plants
Language:English