Atomically resolved imaging of the conformations and adsorption geometries of individual β-cyclodextrins with non-contact AFM

Bibliographic Details
Title: Atomically resolved imaging of the conformations and adsorption geometries of individual β-cyclodextrins with non-contact AFM
Authors: Márkó Grabarics, Benjamín Mallada, Shayan Edalatmanesh, Alejandro Jiménez-Martín, Martin Pykal, Martin Ondráček, Petra Kührová, Weston B. Struwe, Pavel Banáš, Stephan Rauschenbach, Pavel Jelínek, Bruno de la Torre
Source: Nature Communications, Vol 15, Iss 1, Pp 1-7 (2024)
Publisher Information: Nature Portfolio, 2024.
Publication Year: 2024
Collection: LCC:Science
Subject Terms: Science
More Details: Abstract Glycans, consisting of covalently linked sugar units, are a major class of biopolymers essential to all known living organisms. To better understand their biological functions and further applications in fields from biomedicine to materials science, detailed knowledge of their structure is essential. However, due to the extraordinary complexity and conformational flexibility of glycans, state-of-the-art glycan analysis methods often fail to provide structural information with atomic precision. Here, we combine electrospray deposition in ultra-high vacuum with non-contact atomic force microscopy and theoretical calculations to unravel the structure of β-cyclodextrin, a cyclic glucose oligomer, with atomic-scale detail. Our results, established on the single-molecule level, reveal the different adsorption geometries and conformations of β-cyclodextrin. The position of individual hydroxy groups and the location of the stabilizing intramolecular H-bonds are deduced from atomically resolved images, enabling the unambiguous assignment of the molecular structure and demonstrating the potential of the method for glycan analysis.
Document Type: article
File Description: electronic resource
Language: English
ISSN: 2041-1723
Relation: https://doaj.org/toc/2041-1723
DOI: 10.1038/s41467-024-53555-0
Access URL: https://doaj.org/article/c78a95b1951d4b4bb0485e7c1bae5f49
Accession Number: edsdoj.78a95b1951d4b4bb0485e7c1bae5f49
Database: Directory of Open Access Journals
More Details
ISSN:20411723
DOI:10.1038/s41467-024-53555-0
Published in:Nature Communications
Language:English