Bibliographic Details
| Title: |
The first high-quality genome assembly and annotation of Anthocidaris crassispina |
| Authors: |
Jia Zhang, Yu Guo, Jiaqi Su, Gang Yu, Zhenhua Ma, Chuanxin Qin |
| Source: |
Scientific Data, Vol 11, Iss 1, Pp 1-11 (2024) |
| Publisher Information: |
Nature Portfolio, 2024. |
| Publication Year: |
2024 |
| Collection: |
LCC:Science |
| Subject Terms: |
Science |
| More Details: |
Abstract Anthocidaris crassispina is a very popular edible sea urchin distributed along the coast of the South China Sea. In this study, we performed whole-genome sequencing and generated a chromosome-level assembly of this species. The total length of the genomic contig sequence was 891.02 Mb, and contig N50 was 808.15 kb when Hifiasm was used for assembly. The Hi-C library was constructed and sequenced, yielding approximately 68.61 Gb of data. After Hi-C assembly, approximately 886.72 Mb of sequence was able to be mapped onto 21 chromosomes, accounting for 99.52% of the total genome length. Among the sequences located on the chromosomes, those for which the order and direction could be determined accounted for approximately 826.82 Mb, or 93.24% of the total length. These results provide valuable resources for further study of A. crassispina at the genetic level. |
| Document Type: |
article |
| File Description: |
electronic resource |
| Language: |
English |
| ISSN: |
2052-4463 |
| Relation: |
https://doaj.org/toc/2052-4463 |
| DOI: |
10.1038/s41597-024-03733-y |
| Access URL: |
https://doaj.org/article/e71120a8c4d64a009aaa49a17010eaa2 |
| Accession Number: |
edsdoj.71120a8c4d64a009aaa49a17010eaa2 |
| Database: |
Directory of Open Access Journals |
