Dynamics simulations of hypoxia inducible factor-1 regulatory network in cancer using formal verification techniques

Bibliographic Details
Title: Dynamics simulations of hypoxia inducible factor-1 regulatory network in cancer using formal verification techniques
Authors: Hafiz Muhammad Faraz Azhar, Muhammad Tariq Saeed, Ishrat Jabeen
Source: Frontiers in Molecular Biosciences, Vol 11 (2024)
Publisher Information: Frontiers Media S.A., 2024.
Publication Year: 2024
Collection: LCC:Biology (General)
Subject Terms: hypoxia-inducible factor-1 (HIF-1), vascular endothelial growth factor (VEGF), oglycosylation transferase (OGT), glucose transporter-1 (GLUT-1), extracellular single regulated kinase (ERK), cellular myelocytomatosis oncogene (C-MYC), Biology (General), QH301-705.5
More Details: Hypoxia-inducible factor-1 (HIF-1) regulates cell growth, protein translation, metabolic pathways and therefore, has been advocated as a promising biological target for the therapeutic interventions against cancer. In general, hyperactivation of HIF-1 in cancer has been associated with increases in the expression of glucose transporter type-1 (GLUT-1) thus, enhancing glucose consumption and hyperactivating metabolic pathways. The collective behavior of GLUT-1 along with previously known key players AKT, OGT, and VEGF is not fully characterized and lacks clarity of how glucose uptake through this pathway (HIF-1) probes the cancer progression. This study uses a Rene Thomas qualitative modeling framework to comprehend the signaling dynamics of HIF-1 and its interlinked proteins, including VEGF, ERK, AKT, GLUT-1, β-catenin, C-MYC, OGT, and p53 to elucidate the regulatory mechanistic of HIF-1 in cancer. Our dynamic model reveals that continuous activation of p53, β-catenin, and AKT in cyclic conditions, leads to oscillations representing homeostasis or a stable recovery state. Any deviation from this cycle results in a cancerous or pathogenic state. The model shows that overexpression of VEGF activates ERK and GLUT-1, leads to more aggressive tumor growth in a cancerous state. Moreover, it is observed that collective modulation of VEGF, ERK, and β-catenin is required for therapeutic intervention because these genes enhance the expression of GLUT-1 and play a significant role in cancer progression and angiogenesis. Additionally, SimBiology simulation unveils dynamic molecular interactions, emphasizing the need for targeted therapeutics to effectively regulate VEGF and ERK concentrations to modulate cancer cell proliferation.
Document Type: article
File Description: electronic resource
Language: English
ISSN: 2296-889X
Relation: https://www.frontiersin.org/articles/10.3389/fmolb.2024.1386930/full; https://doaj.org/toc/2296-889X
DOI: 10.3389/fmolb.2024.1386930
Access URL: https://doaj.org/article/4e84d60b62394b378bc3b6e928507afc
Accession Number: edsdoj.4e84d60b62394b378bc3b6e928507afc
Database: Directory of Open Access Journals
More Details
ISSN:2296889X
DOI:10.3389/fmolb.2024.1386930
Published in:Frontiers in Molecular Biosciences
Language:English