Gut microbiome community profiling of Bornean bats with different feeding guilds

Bibliographic Details
Title: Gut microbiome community profiling of Bornean bats with different feeding guilds
Authors: Muhd Amsyari Morni, Julius William-Dee, Emy Ritta Jinggong, Nor Al-Shuhada Sabaruddin, Nur Afiqah Aqilah Azhar, Muhammad Amin Iman, Peter A. Larsen, Jaya Seelan Sathiya Seelan, Lesley Maurice Bilung, Faisal Ali Anwarali Khan
Source: Animal Microbiome, Vol 7, Iss 1, Pp 1-12 (2025)
Publisher Information: BMC, 2025.
Publication Year: 2025
Collection: LCC:Veterinary medicine
LCC:Microbiology
Subject Terms: Bats, Bacteria, Borneo, Gut microflora, Insectivorous, Nanopore sequencing, Veterinary medicine, SF600-1100, Microbiology, QR1-502
More Details: Abstract Bats are extraordinary mammals. They have evolved to consume various dietary sources, such as insects, fruits, nectar, blood, and meat. This diversity has generated considerable interest in the scientific community, resulting in efforts to leverage bats as model organisms to study the correlation between diet and gut microbiome community. Although such studies now commonly use Next Generation Sequencing (NGS), similar studies are early in their development in Southeast Asia, especially in Malaysia, which harbours an incredibly diverse bat fauna. This study provides pioneering NGS metabarcoding information on Bornean bats. By using a high-throughput Nanopore-based 16S rRNA gene sequencing method, Bacillota, Pseudomonadota, and Campylobacterota were found in insectivorous bats and phytophagous bats. Both insectivorous and phytophagous groups harboured no dominant taxon (D = 0.076; D = 0.085). A comparative analysis of gut bacteria functional groups identified eight major groups in both phytophagous and insectivorous bats, with fermentation being the predominant group. The correlation network analysis revealed a negative correlation between the ‘good bacteria’ Lactobacillus and various pathogenic bacteria genera, such as Salmonella (-0.4124) and Yersinia (-0.4654), demonstrating its prebiotic characteristics. This study broadens our understanding of the bat gut microbiome from various diets, with emphasis on new data from Borneo.
Document Type: article
File Description: electronic resource
Language: English
ISSN: 2524-4671
Relation: https://doaj.org/toc/2524-4671
DOI: 10.1186/s42523-025-00389-w
Access URL: https://doaj.org/article/1b1a15ea7637418eb54fac686d7d69eb
Accession Number: edsdoj.1b1a15ea7637418eb54fac686d7d69eb
Database: Directory of Open Access Journals
More Details
ISSN:25244671
DOI:10.1186/s42523-025-00389-w
Published in:Animal Microbiome
Language:English