Deep Learning-Assisted Compound Bioactivity Estimation Framework

Bibliographic Details
Title: Deep Learning-Assisted Compound Bioactivity Estimation Framework
Authors: Yasmine Eid Mahmoud Yousef, Ayman El-Kilany, Farid Ali, Yassin M. Nissan, Ehab E. Hassanein
Source: Egyptian Informatics Journal, Vol 28, Iss , Pp 100558- (2024)
Publisher Information: Elsevier, 2024.
Publication Year: 2024
Collection: LCC:Electronic computers. Computer science
Subject Terms: Drug discovery, Deep learning, Regression, Auto-encoder, Classification, Electronic computers. Computer science, QA75.5-76.95
More Details: Drug Discovery is a highly complicated process. On average, it takes six to twelve years to manufacture a new drug and have the product released in the market. It is of utmost importance to find methods that would accelerate the manufacturing process. This significant challenge in drug development can be addressed using deep learning techniques. The aim of this paper is to propose a deep learning-based framework that can help chemists examine compound biological activity in a more accurate manner. The proposed framework employs autoencoder for data representation of the compounds data, which is then classified using deep neural network followed by building a customized deep regression model to estimate an accurate value of the compound bioactivity. The proposed framework achieved an accuracy of 89% in autoencoder reconstruction error, 79.01% in classification, and MAE of 2.4 while predicting compound bioactivity using deep regression model.
Document Type: article
File Description: electronic resource
Language: English
ISSN: 1110-8665
Relation: http://www.sciencedirect.com/science/article/pii/S111086652400121X; https://doaj.org/toc/1110-8665
DOI: 10.1016/j.eij.2024.100558
Access URL: https://doaj.org/article/c0dd1a4db37b4bbe8bc98b80c4b7c75c
Accession Number: edsdoj.0dd1a4db37b4bbe8bc98b80c4b7c75c
Database: Directory of Open Access Journals
More Details
ISSN:11108665
DOI:10.1016/j.eij.2024.100558
Published in:Egyptian Informatics Journal
Language:English