Synthesis of Headful Packaging Phages Through Yeast Transformation-Associated Recombination

Bibliographic Details
Title: Synthesis of Headful Packaging Phages Through Yeast Transformation-Associated Recombination
Authors: Cheng Lu, Lan He, Yangyijun Guo, Tingting Wang, Yanrui Ye, Zhanglin Lin
Source: Viruses, Vol 17, Iss 1, p 45 (2024)
Publisher Information: MDPI AG, 2024.
Publication Year: 2024
Collection: LCC:Microbiology
Subject Terms: headful packaging, synthetic phage, yeast transformation-associated recombination, Pseudomonas aeruginosa phage, Microbiology, QR1-502
More Details: De novo synthesis of phage genomes enables flexible genome modification and simplification. This study explores the synthetic genome assembly of Pseudomonas phage vB_PaeS_SCUT-S4 (S4), a 42,932 bp headful packaging phage, which encapsidates a terminally redundant, double-stranded DNA genome exceeding unit length. We demonstrate that using the yeast TAR approach, the S4 genome can be assembled and rebooted from a unit-length genome plus a minimal 60 bp terminal redundant sequence. Furthermore, we show that S4 can be synthesized from arbitrary starting nucleotides and modified with a red fluorescent protein as a reporter. Additionally, we successfully designed and assembled synthetic S4 phages with reduced genomes, knocking out up to 10 of the 24 hypothetical genes simultaneously, with a combined length of 2883 bp, representing 6.7% of the unit-length genome. This work highlights the potential for engineering simplified, customizable headful packaging phage genomes, providing a foundation for future studies of these phages for potential clinical applications.
Document Type: article
File Description: electronic resource
Language: English
ISSN: 1999-4915
Relation: https://www.mdpi.com/1999-4915/17/1/45; https://doaj.org/toc/1999-4915
DOI: 10.3390/v17010045
Access URL: https://doaj.org/article/03b8b7f9630f4a7bba7c616d3bd12676
Accession Number: edsdoj.03b8b7f9630f4a7bba7c616d3bd12676
Database: Directory of Open Access Journals
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More Details
ISSN:19994915
DOI:10.3390/v17010045
Published in:Viruses
Language:English