LaTiM: Longitudinal representation learning in continuous-time models to predict disease progression

Bibliographic Details
Title: LaTiM: Longitudinal representation learning in continuous-time models to predict disease progression
Authors: Zeghlache, Rachid, Conze, Pierre-Henri, Daho, Mostafa El Habib, Li, Yihao, Boité, Hugo Le, Tadayoni, Ramin, Massin, Pascal, Cochener, Béatrice, Rezaei, Alireza, Brahim, Ikram, Quellec, Gwenolé, Lamard, Mathieu
Publication Year: 2024
Collection: Computer Science
Subject Terms: Computer Science - Machine Learning, Computer Science - Artificial Intelligence
More Details: This work proposes a novel framework for analyzing disease progression using time-aware neural ordinary differential equations (NODE). We introduce a "time-aware head" in a framework trained through self-supervised learning (SSL) to leverage temporal information in latent space for data augmentation. This approach effectively integrates NODEs with SSL, offering significant performance improvements compared to traditional methods that lack explicit temporal integration. We demonstrate the effectiveness of our strategy for diabetic retinopathy progression prediction using the OPHDIAT database. Compared to the baseline, all NODE architectures achieve statistically significant improvements in area under the ROC curve (AUC) and Kappa metrics, highlighting the efficacy of pre-training with SSL-inspired approaches. Additionally, our framework promotes stable training for NODEs, a commonly encountered challenge in time-aware modeling.
Comment: Submitted to MICCAI 2024
Document Type: Working Paper
Access URL: http://arxiv.org/abs/2404.07091
Accession Number: edsarx.2404.07091
Database: arXiv
More Details
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