Bibliographic Details
| Title: |
Recording provenance of workflow runs with RO-Crate. |
| Authors: |
Leo, Simone, Crusoe, Michael R., Rodríguez-Navas, Laura, Sirvent, Raül, Kanitz, Alexander, De Geest, Paul, Wittner, Rudolf, Pireddu, Luca, Garijo, Daniel, Fernández, José M., Colonnelli, Iacopo, Gallo, Matej, Ohta, Tazro, Suetake, Hirotaka, Capella-Gutierrez, Salvador, de Wit, Renske, Kinoshita, Bruno P., Soiland-Reyes, Stian |
| Source: |
PLoS ONE; 9/10/2024, Vol. 19 Issue 9, p1-35, 35p |
| Subject Terms: |
IMAGE analysis, DIGITAL learning, MACHINE learning, WORKFLOW management systems, INFORMATION sharing, DATA modeling, WORKFLOW |
| Abstract: |
Recording the provenance of scientific computation results is key to the support of traceability, reproducibility and quality assessment of data products. Several data models have been explored to address this need, providing representations of workflow plans and their executions as well as means of packaging the resulting information for archiving and sharing. However, existing approaches tend to lack interoperable adoption across workflow management systems. In this work we present Workflow Run RO-Crate, an extension of RO-Crate (Research Object Crate) and Schema.org to capture the provenance of the execution of computational workflows at different levels of granularity and bundle together all their associated objects (inputs, outputs, code, etc.). The model is supported by a diverse, open community that runs regular meetings, discussing development, maintenance and adoption aspects. Workflow Run RO-Crate is already implemented by several workflow management systems, allowing interoperable comparisons between workflow runs from heterogeneous systems. We describe the model, its alignment to standards such as W3C PROV, and its implementation in six workflow systems. Finally, we illustrate the application of Workflow Run RO-Crate in two use cases of machine learning in the digital image analysis domain. [ABSTRACT FROM AUTHOR] |
|
Copyright of PLoS ONE is the property of Public Library of Science and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.) |
| Database: |
Complementary Index |
|
Full text is not displayed to guests. |
Login for full access.
|
