sigRGCN: A Robust Residual Graph Convolutional Network for scRNA-Seq Data Clustering

Authors: Shu, Z., Xia, M., Tan, K., Yu, Z., Wu, X.

Source: IEEE Transactions on Computational Biology and Bioinformatics IEEE Trans. Comput. Biol. Bioinform. Computational Biology and Bioinformatics, IEEE Transactions on. 22(1):271-284 Jan, 2025

Detecting Boolean Asymmetric Relationships With a Loop Counting Technique and its Implications for Analyzing Heterogeneity Within Gene Expression Datasets

Authors: Zhou, H., Lin, W., Labra, S.R., Lipton, S.A., Elman, J.A., Schork, N.J., Rangan, A.V.

Source: IEEE Transactions on Computational Biology and Bioinformatics IEEE Trans. Comput. Biol. Bioinform. Computational Biology and Bioinformatics, IEEE Transactions on. 22(1):27-38 Jan, 2025

scPerformer-Based Deep Clustering of Single Cell RNA Sequencing Data

Authors: Ahmadi, Parisa, Elmi, Naser, Kavousi, Kaveh, Majidi, Babak

Source: 2024 10th International Conference on Signal Processing and Intelligent Systems (ICSPIS) Signal Processing and Intelligent Systems (ICSPIS), 2024 10th International Conference on. :160-165 Dec, 2024

Relation: 2024 10th International Conference on Signal Processing and Intelligent Systems (ICSPIS)

Identification of cell-type-specific genes associated with autism by integrating gene expression and alternative polyadenylation profiles

Authors: Bi, Xingyu, Kang, Liping, Wu, Xiaohui

Source: 2024 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) Bioinformatics and Biomedicine (BIBM), 2024 IEEE International Conference on. :603-608 Dec, 2024

Relation: 2024 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)

GRNNLink: Predicting gene regulatory links from single-cell RNA-seq data using graph recurrent neural network

Authors: Bai, Liang, Wang, Shulin

Source: 2024 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) Bioinformatics and Biomedicine (BIBM), 2024 IEEE International Conference on. :491-496 Dec, 2024

Relation: 2024 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)

A New Method for Processing scRNA-seq Data by Coupling Low-Rank Representation and Concept Factorization

Authors: Zhang, Zhenduo, Liu, Jinxing, Li, Shengjun, Wang, Juan

Source: 2024 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) Bioinformatics and Biomedicine (BIBM), 2024 IEEE International Conference on. :5574-5581 Dec, 2024

Relation: 2024 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)

CytoFlow: A Novel Computational Method to Construct Signal Transduction Networks at Single-Cell Resolution Based on Flow Networks

Authors: Dai, Yi, Duan, Ziheng, Xu, Siwei, Zhang, Jing

Source: 2024 IEEE International Conference on Medical Artificial Intelligence (MedAI) MEDAI Medical Artificial Intelligence (MedAI), 2024 IEEE International Conference on. :212-217 Nov, 2024

Relation: 2024 IEEE International Conference on Medical Artificial Intelligence (MedAI)

Contrastive Representation Learning for Multimodal Single-Cell RNA-Seq Data Integration

Authors: Kosuru, Vishnu Vardhan, Ramaraju, Sree Virajitha, Anatatmula, Sri Harshitha, Anjali, T

Source: 2024 8th International Conference on Electronics, Communication and Aerospace Technology (ICECA) Electronics, Communication and Aerospace Technology (ICECA), 2024 8th International Conference on. :627-633 Nov, 2024

Relation: 2024 8th International Conference on Electronics, Communication and Aerospace Technology (ICECA)

A Novel GCN-Based Cell Annotation Method for Single-Cell RNA Sequencing Data

Authors: Tang, Binhua, Cheng, Guowei

Source: 2024 17th International Congress on Image and Signal Processing, BioMedical Engineering and Informatics (CISP-BMEI) Image and Signal Processing, BioMedical Engineering and Informatics (CISP-BMEI), 2024 17th International Congress on. :1-5 Oct, 2024

Relation: 2024 17th International Congress on Image and Signal Processing, BioMedical Engineering and Informatics (CISP-BMEI)

$p$-ClustVal: A Novel $p$-Adic Approach for Enhanced Clustering of High-Dimensional scRNASeq Data (Extended Abstract)

Authors: Sharma, Parichit, Mishra, Sarthak, Kurban, Hasan, Dalkilic, Mehmet

Source: 2024 IEEE 11th International Conference on Data Science and Advanced Analytics (DSAA) Data Science and Advanced Analytics (DSAA), 2024 IEEE 11th International Conference on. :1-3 Oct, 2024

Relation: 2024 IEEE 11th International Conference on Data Science and Advanced Analytics (DSAA)

Hypergraph-based Clustering for Single-Cell RNA Sequencing Data

Authors: Hu, Can, Sheng, Yuxia

Source: 2024 43rd Chinese Control Conference (CCC) Chinese Control Conference (CCC), 2024 43rd. :3529-3534 Jul, 2024

Relation: 2024 43rd Chinese Control Conference (CCC)

HyperCell: Advancing Cell Type Classification with Hyperdimensional Computing

Authors: Mohammadi, Hossein, Baranpouyan, Maziyar, Thirunarayan, Krishnaprasad, Chen, Lingwei

Source: 2024 46th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC) Engineering in Medicine and Biology Society (EMBC), 2024 46th Annual International Conference of the IEEE. :1-4 Jul, 2024

Relation: 2024 46th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC)

A Hybrid Approach for Enhancing Single-Cell Type Clustering

Authors: Suphaphimol, Nattaphon, Jeong, Hyundoo, Khunlertgit, Navadon

Source: 2024 8th International Conference on Biomedical Engineering and Applications (ICBEA) ICBEA Biomedical Engineering and Applications (ICBEA), 2024 8th International Conference on. :56-59 Mar, 2024

Relation: 2024 8th International Conference on Biomedical Engineering and Applications (ICBEA)

scDMAE: A Generative Denoising Model Adopted Mask Strategy for scRNA-Seq Data Recovery

Authors: Liu, W., Pan, Y., Teng, Z., Xu, J.

Source: IEEE Journal of Biomedical and Health Informatics IEEE J. Biomed. Health Inform. Biomedical and Health Informatics, IEEE Journal of. 28(6):3772-3780 Jun, 2024

Analysis of Single-Cell RNA Sequencing Data Unveils Novel Immune Prognostic Biomarkers

Authors: Zhang, Wenjuan, Lee, Alex, Yang, Mary Qu

Source: 2023 International Conference on Computational Science and Computational Intelligence (CSCI) CSCI Computational Science and Computational Intelligence (CSCI), 2023 International Conference on. :558-563 Dec, 2023

Relation: 2023 International Conference on Computational Science and Computational Intelligence (CSCI)

Identification of Single-Cell RNA Sequencing Molecular Signatures for COVID-19 Infection Severity Classification

Authors: Li, Xinling, Zhang, Cheng, Chen, Wei-An, Shi, Wenqi, Wang, May D.

Source: 2023 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) Bioinformatics and Biomedicine (BIBM), 2023 IEEE International Conference on. :2044-2047 Dec, 2023

Relation: 2023 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)

Co-clustering of single-cell RNA-seq data based on weighted non-negative matrix tri-factorization combined with consensus clustering

Authors: Ren, Tongtong, Wang, Guohua

Source: 2023 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) Bioinformatics and Biomedicine (BIBM), 2023 IEEE International Conference on. :183-190 Dec, 2023

Relation: 2023 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)

Local-Global Graph Fusion to Enhance scRNA-Seq Clustering

Authors: Du, L., Han, Y.

Source: IEEE Access Access, IEEE. 12:165371-165383 2024

scCAN: Clustering With Adaptive Neighbor-Based Imputation Method for Single-Cell RNA-Seq Data

Authors: Dong, S., Liu, Y., Gong, Y., Dong, X., Zeng, X.

Source: IEEE/ACM Transactions on Computational Biology and Bioinformatics IEEE/ACM Trans. Comput. Biol. and Bioinf. Computational Biology and Bioinformatics, IEEE/ACM Transactions on. 21(1):95-105 Jan, 2024

A Deep Embedded Clustering Method Based on $\beta$-Variational Autoencoder for Single-Cell RNA Sequencing Data

Authors: Ma, Yupeng, Pei, Yongzhen, Li, Changguo

Source: 2023 6th International Conference on Information Communication and Signal Processing (ICICSP) Information Communication and Signal Processing (ICICSP), 2023 6th International Conference on. :97-102 Sep, 2023

Relation: 2023 6th International Conference on Information Communication and Signal Processing (ICICSP)