Optimizing a modified cetyltrimethylammonium bromide protocol for fungal DNA extraction: Insights from multilocus gene amplification

Authors: Dar Gulam Jeelani, Nazir Ruqeya, Wani Shakil A., Farooq Saleem, Aziz Tariq, Albekairi Thamer H.

Source: Open Life Sciences, Vol 20, Iss 1, Pp 44-7 (2025)

Subject Terms: ctab, gene loci, genomic dna, its, mlst, pcr, Biology (General), QH301-705.5

File Description: electronic resource

Relation: https://doaj.org/toc/2391-5412

Access URL: https://doaj.org/article/a72d881d910f420b950f99535543b04e

Specific Primer Design for Detection and Quantification of Entomopathogenic Fungi Metarhizium anisopliae using Quantitative PCR (qPCR) in Soil and Cocoon Samples

Authors: Syaiful Amri Saragih, Shuhei Takemoto, Naoto Kamata

Source: AGRIVITA Journal of Agricultural Science, Vol 47, Iss 1, Pp 168-175 (2025)

Subject Terms: cocoon samples, genomic dna, metarhizium anisopliae, qpcr, soil dna, Agriculture, Plant culture, SB1-1110

File Description: electronic resource

Relation: https://agrivita.ub.ac.id/index.php/agrivita/article/view/4644; https://doaj.org/toc/0126-0537; https://doaj.org/toc/2477-8516

Access URL: https://doaj.org/article/521dc4ecdb7e41d0b63f37abd7e1cb41

Genotyping Transgenic Plants and Harvesting Seeds for Selecting Rice Varieties Enriched with Resistant Starch

Source: Journal of Visualized Experiments.

Availability: http://www.jove.com/video/202473

Application of Classical and Genomic Cryptography on Textual Dataset

Authors: İbrahim Türkoğlu, Alev Kaya

Source: Sakarya University Journal of Computer and Information Sciences, Vol 7, Iss 3, Pp 389-403 (2024)

Subject Terms: genomic (dna) encryption, textual data, siyasetname, aes, ecdh, Electronic computers. Computer science, QA75.5-76.95, Information technology, T58.5-58.64

File Description: electronic resource

Relation: https://dergipark.org.tr/en/download/article-file/3926941; https://doaj.org/toc/2636-8129

Access URL: https://doaj.org/article/d0e9f79e4c824c0c9ff6240a7b0d1b1b

Metabolomics analysis reveals resembling metabolites between humanized γδ TCR mice and human plasma

Authors: Husheem Michael, Gene W. Weng, Mikaela M. Vallas, Douglas Lovos, Ellen Chen, Paul Sheiffele, Wei Weng

Source: Scientific Reports, Vol 14, Iss 1, Pp 1-18 (2024)

Subject Terms: Humanized mice, Metabolomics, Lipidomics, Plasma, Bacterial artificial chromosome genomic DNA platform, γδ, Medicine, Science

File Description: electronic resource

Relation: https://doaj.org/toc/2045-2322

Access URL: https://doaj.org/article/020ca796f2584d5c84d29fb2772d14ef

Spore PCR and qPCR Methods for Rapid Detection of Five Colletotrichum Species Responsible for Pepper Anthracnose in Korea

Authors: Haejun Jeong, Jonghan Yoon, Hoyoung Park, Min Son, Sook-Young Park, Kwang-Hyung Kim

Source: Research in Plant Disease, Vol 30, Iss 3, Pp 219-228 (2024)

Subject Terms: capsicum annuum, colletotrichum spp., genomic dna, spore pcr, quantitative real-time pcr, Agriculture (General), S1-972

File Description: electronic resource

Relation: http://online-rpd.org/upload/pdf/RPD-2024-30-3-219.pdf; https://doaj.org/toc/1598-2262; https://doaj.org/toc/2233-9191

Access URL: https://doaj.org/article/320ffc0c84b04f83b18b0db1f847402b

Prognostic significance of serum complement activation, neutrophil extracellular traps and extracellular DNA in newly diagnosed epithelial ovarian cancer

Authors: Ricciuti, Jason ^{a, b, 1}, Liu, Qian ^{c, 1}, Khan, A.N.M. Nazmul H. ^{d, 1}, Joseph, Janine M. ^{e, 1}, Veuskens, Bert ^{i, 1}, Giridharan, Thejaswini ^f, Suzuki, Sora ^f, Emmons, Tiffany ^g, Yaffe, Michael ^{g, h}, Kuijpers, Taco W. ^{i, k}, Jongerius, Ilse ^{i, k}, Brouwer, Mieke ⁱ, Pouw, Richard B. ^{i, j}, Odunsi, Kunle ^l, Frederick, Peter ^a, Mager, Katherine LaVigne ^a, Lele, Shashikant ^a, Gaulin, Nicole ^a, Hakim, Christiane ^q, Edwards, Robert P. ^{m, o}, Olawaiye, Alexander B. ^m, Sukamanovich, Paniti ^m, Taylor, Sarah ^{m, o}, Elishaev, Esther ^{o, p}, Zsiros, Emese ^a, Modugno, Francesmary ^{m, n, o, 2}, Moysich, Kirsten ^{e, 3}, Segal, Brahm ^{r, s, ⁎, 3}

Source: In Gynecologic Oncology February 2025 193:49-57

Comparative evaluation of DNA synthesis for qPCR analysis from oral squamous cell carcinoma tissues - A rapid and robust isolation technique for gene expression studies

Authors: Ramya Mahalingam, Vivek Narayanan, Magesh Karuppur Thiagarajan, T. Jayaprakash, K.V. Leela

Source: Oral Oncology Reports, Vol 12, Iss , Pp 100677- (2024)

Subject Terms: Complementary DNA, Genomic DNA, Quantitative reverse transcriptase polymerized chain reaction, Metastasis suppressor genes, Oral squamous cell carcinoma, Neoplasms. Tumors. Oncology. Including cancer and carcinogens, RC254-282

File Description: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S2772906024005235; https://doaj.org/toc/2772-9060

Access URL: https://doaj.org/article/b527d214eb6e4be0840d705f7237be13

Rapid and efficient isolation of genomic DNA from Okra (Abelmoschus esculentus L.): A streamlined alternative to conventional methods

Authors: Sarthi, Vishal Johar, Narayan Singh, Abdullah Alaklabi, Salim Khan

Source: Environment Conservation Journal, Vol 25, Iss 4 (2024)

Subject Terms: Abelmoschus esculentus, CTAB, Genomic DNA, Modified technique, Environmental sciences, GE1-350

File Description: electronic resource

Relation: https://journal.environcj.in/index.php/ecj/article/view/2765; https://doaj.org/toc/0972-3099; https://doaj.org/toc/2278-5124

Access URL: https://doaj.org/article/dabc06c2ab884f00988cf4bb60376a72

Optimizing genomic DNA extraction from long-term preserved formalin-fixed and paraffin-embedded lung cancer and lymph node tissues

Authors: C.S. Faria, C.M. Baldavira, F.R.R. Mangone, M.E.M. Agati, L.D. Kulikowski, M.A. Nagai, E.C.T. do Nascimento, E.S. de Mello, V.L. Capelozzi, L. Antonangelo

Source: Brazilian Journal of Medical and Biological Research, Vol 57 (2024)

Subject Terms: Paraffin-embedded tissues, Slide scrapings, Genomic DNA extraction, Lung adenocarcinoma, Mediastinal lymph nodes, Medicine (General), R5-920, Biology (General), QH301-705.5

File Description: electronic resource

Relation: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0100-879X2024000100696&lng=en&tlng=en; http://www.scielo.br/pdf/bjmbr/v57/1414-431X-bjmbr-57-e14095.pdf; https://doaj.org/toc/1414-431X

Access URL: https://doaj.org/article/f07b12c2319b46ab9bbdb21b67d02725

Antimicrobial Biomaterials: Recent Progress

Contributors: Felgueiras, Helena

Subject Terms: soy protein isolate, quaternization, antibacterial property, wound healing, antimicrobial therapy, antimicrobial resistance, drug delivery systems, antimicrobials delivery, nanocarriers, antibacterial nanoformulations, antifungal nanoformulations, antiviral nanoformulations, antiparasitic nanoformulations, chitosan nanoparticles, yellow everzol textile dyes, biocompatibility, HaCat cells, antimicrobial activity, skin pathogens, cell infection assays, multidrug resistance, nanoparticles, antibiotic combinations, infectious disease, chitosan, fruit quality parameters, sweet orange essential oil, phosphoric acid, preharvest treatments, Ag@AgCl nanoparticles, synthesis mechanisms, Shewanella sp., dye reduction, antibacterial activity, CO2 laser, Enterococcus faecalis, erbium laser, oral pathogens, Streptococcus mutans, Streptococcus sanguinis, drug resistance, molecular diagnosis, anti-tuberculosis therapy, Real-Time PCR, isoniazid, rifampicin, genomic DNA, mutation, vitreous enamel, antimicrobial coatings, silver, fungicidal activity, antimicrobial, antimycobacterial, benzoxaborole, cytotoxicity, molecular docking, multidrug-resistant tuberculosis, tuberculosis, 1H-benzo[d]imidazole derivatives, structure–activity relationship, X-ray, ADME, crossing the blood–brain barrier, cellobiose dehydrogenase, immobilization, antioxidant, cytotoxic, external ventricular drain, biofilm, bacteria, silver nanoparticles, antibiotics impregnated, biomaterial, porous silica spheres, porosity, surface area, microbial activity, enzyme activity, antibiotic resistance, click chemistry, photopolymerization, AMP-releasing, self-assembling, hydrogel, antimicrobial peptide, orthodontic brackets, S-Nitroso-N-Acetylpenicillamine (SNAP), orthodontic ligatures, dental plaque, antibacterial chains, elastomeric chainswhite spot lesions, nitric oxide, SNAP, Public health and preventive medicine

File Description: application/octet-stream

Access URL: https://directory.doabooks.org/handle/20.500.12854/143791
https://mdpi.com/books/pdfview/book/9530

Novel PCR-Based Technology for the Detection of Sunflower in Edible and Used Cooking Oils

Authors: Tamara Kutateladze, Kakha Karchkhadze, Kakha Bitskinashvili, Boris Vishnepolsky, Tata Ninidze, David Mikeladze, Nelly Datukishvili

Source: Foods, Vol 13, Iss 23, p 3760 (2024)

Subject Terms: sunflower detection, PCR technology, genomic DNA extraction, edible oil, used cooking oil, Chemical technology, TP1-1185

File Description: electronic resource

Relation: https://www.mdpi.com/2304-8158/13/23/3760; https://doaj.org/toc/2304-8158

Access URL: https://doaj.org/article/ecc45f54d94b4f4c9720e686535c88e4

Improving the Productivity and Physiological Characteristics of Lettuce Plants Using Spraying Calcium as a Nanofertilizer

Authors: Dina M. Salama, Samira A. Osman, Sami H. Mahmoud, Ahmed M. M. El-Tanahy, Mahmoud E. Abd El-Aziz

Source: Horticulturae, Vol 10, Iss 11, p 1157 (2024)

Subject Terms: Lactuca sativa L., calcium nanoparticles, plant growth, yield, chemical content, genomic DNA, Plant culture, SB1-1110

File Description: electronic resource

Relation: https://www.mdpi.com/2311-7524/10/11/1157; https://doaj.org/toc/2311-7524

Access URL: https://doaj.org/article/9c78c83b73da406791bdb4e3193e22a7

Irreproducible results and unsupported conclusions in Ahmad et al. [BMC genomics (2020) 21:656]

Authors: Francisco J. Ruiz-Ruano, Juan Pedro M. Camacho

Source: BMC Genomics, Vol 24, Iss 1, Pp 1-5 (2023)

Subject Terms: B chromosomes, Genes, Genomic DNA, Normalization, Transcriptome, Biotechnology, TP248.13-248.65, Genetics, QH426-470

File Description: electronic resource

Relation: https://doaj.org/toc/1471-2164

Access URL: https://doaj.org/article/f28365ad46cd4bb8ab3812046f872037

Preliminary study of familial nonsyndromic tooth agenesis caused by ectodysplasin A mutation

Authors: WANG Huihui, WU Qing, XU Bin, LING Qi, WU Yiqun

Source: 口腔疾病防治, Vol 31, Iss 11, Pp 768-773 (2023)

Subject Terms: ectodysplasin a gene, non-syndromic tooth agenesis, syndromic tooth agenesis, hypodontia, oligodontia, whole exome sequencing, sanger sequencing, genomic dna, gene mutation, missense mutation, Medicine

File Description: electronic resource

Relation: https://www.kqjbfz.com/CN/10.12016/j.issn.2096-1456.2023.11.002; https://doaj.org/toc/2096-1456

Access URL: https://doaj.org/article/44f82fe1e772488ba51dc79262c575e4

An alternative application of some SSR DNA markers in experimental mycology

Authors: Boiko S.M.

Source: Ukrainian Botanical Journal, Vol 80, Iss 3, Pp 283-291 (2023)

Subject Terms: amplicons heterogeneity, dna markers, genetic profiling, genomic dna, primers, schizophyllum commune, Botany, QK1-989

File Description: electronic resource

Relation: https://ukrbotj.co.ua/archive/80/3/283; https://doaj.org/toc/0372-4123; https://doaj.org/toc/2415-8860

Access URL: https://doaj.org/article/03f297c689994cd994e96525b9873c70

Cloning of Three Cytokinin Oxidase/Dehydrogenase Genes in Bambusa oldhamii

Authors: Chun-Yen Hsieh, Lu-Sheng Hsieh

Source: Current Issues in Molecular Biology, Vol 45, Iss 3, Pp 1902-1913 (2023)

Subject Terms: Bambusa oldhamii, cytokinin oxidase/dehydrogenase, genomic DNA library, Biology (General), QH301-705.5

File Description: electronic resource

Relation: https://www.mdpi.com/1467-3045/45/3/123; https://doaj.org/toc/1467-3037; https://doaj.org/toc/1467-3045

Access URL: https://doaj.org/article/f022071153ed4f03984b7eb7a0b724d9

In Vitro Isolation and Molecular Characterization of Genomic DNA from Ancient Human Long and Hip Bones

Authors: Dinesh Kumar, Lalit Mohan Jeena, Devendra Shekhawat, Ira Verma, Sidd Sana

Source: MAMC Journal of Medical Sciences, Vol 9, Iss 1, Pp 44-49 (2023)

Subject Terms: atpase6 gene, ancient bones, genomic dna, in vitro, polymerase chain reaction, Medicine

File Description: electronic resource

Relation: http://www.mamcjms.in/article.asp?issn=2394-7438;year=2023;volume=9;issue=1;spage=44;epage=49;aulast=Kumar; https://doaj.org/toc/2394-7438

Access URL: https://doaj.org/article/741d6b7f33374c55887ccd08f32f7ac0

Development of droplet digital PCR for quantification of bovine leukemia virus proviral load using unpurified genomic DNA

Authors: Wu, Xinyue ^a, Notsu, Kousuke ^a, Matsuura, Yuichi ^b, Mitoma, Shuya ^c, El Daous, Hala ^d, Norimine, Junzo ^{e, f}, Sekiguchi, Satoshi ^{e, f, ⁎}

Source: In Journal of Virological Methods May 2023 315

An optimal genomic DNA extraction method for shoots of four Dendrocalamus species based on membership function analysis

Authors: Yingchun Ma, Bowen Li, Dejia Yang, Shuguang Wang, Lixia Yu, Hui Zhan, Juan Li

Source: BioTechniques (2023)

Subject Terms: bamboo, Dendrocalamus, extraction, genomic DNA, membership function method, Biology (General), QH301-705.5

File Description: electronic resource

Relation: https://doaj.org/toc/0736-6205; https://doaj.org/toc/1940-9818

Access URL: https://doaj.org/article/7473f7ef23cd4495ab935d76d95951c7