The ataxia-telangiectasia disease protein ATM controls vesicular protein secretion via CHGA and microtubule dynamics via CRMP5

Authors: Marina Reichlmeir, Ruth Pia Duecker, Hanna Röhrich, Jana Key, Ralf Schubert, Kathryn Abell, Anthony P. Possemato, Matthew P. Stokes, Georg Auburger

Source: Neurobiology of Disease, Vol 203, Iss , Pp 106756- (2024)

Subject Terms: PhosphoScan®, Immobilized metal affinity chromatography, Label-free mass spectrometry, Co-immunoprecipitation, Sodium arsenite, Chloroquine, Neurosciences. Biological psychiatry. Neuropsychiatry, RC321-571

File Description: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S0969996124003589; https://doaj.org/toc/1095-953X

Access URL: https://doaj.org/article/d4f5a9d28bce480a840e354883c3764f

TDP43 interacts with MLH1 and MSH6 proteins in a DNA damage-inducible manner

Authors: Vincent E. Provasek, Manohar Kodavati, Brandon Kim, Joy Mitra, Muralidhar L. Hegde

Source: Molecular Brain, Vol 17, Iss 1, Pp 1-4 (2024)

Subject Terms: TDP-43, DNA mismatch repair (MMR), DNA double-strand breaks (DSBs), Neurodegeneration, Amyotrophic lateral sclerosis (ALS), Co-immunoprecipitation (CoIP), Neurology. Diseases of the nervous system, RC346-429

File Description: electronic resource

Relation: https://doaj.org/toc/1756-6606

Access URL: https://doaj.org/article/789bc818a5f940d18d10982b7e5cbe39

Artemisinin resistance in P. falciparum: probing the interacting partners of Kelch13 protein in parasite

Authors: Atul, Preeti Chaudhary, Swati Gupta, Rumaisha Shoaib, Rahul Pasupureddy, Bharti Goyal, Bhumika Kumar, Om Prakash Singh, Rajnikant Dixit, Shailja Singh, Mymoona Akhter, Neera Kapoor, Veena Pande, Soumyananda Chakraborti, Kapil Vashisht, Kailash C. Pandey

Source: Journal of Global Antimicrobial Resistance, Vol 35, Iss , Pp 67-75 (2023)

Subject Terms: P. falciparum, Kelch13 protein, Artemisinin resistance, Malaria, Co-immunoprecipitation, Protein–protein interactions, Microbiology, QR1-502

File Description: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S2213716523001376; https://doaj.org/toc/2213-7165

Access URL: https://doaj.org/article/1d5ae284f76c4fe2bf7d1a7b3c634252

Protein interactors of Spindle Pole Body (SPB) components and septal proteins in fungus Neurospora crassa: A mass spectrometry-based dataset

Authors: Astrid N. Espino-Vázquez, Rosa Ramírez Cota, Olga Alicia Callejas-Negrete, Reinhard Fischer, Rosa R. Mouriño-Pérez

Source: Data in Brief, Vol 52, Iss , Pp 109980- (2024)

Subject Terms: Co-immunoprecipitation, Protein-protein interactions, LC-MS/MS, Neurospora crassa, MTOC, γ-Tubulin, Computer applications to medicine. Medical informatics, R858-859.7, Science (General), Q1-390

File Description: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S2352340923010119; https://doaj.org/toc/2352-3409

Access URL: https://doaj.org/article/e7666c743bcc4d318e64866e26c8f614

A hidden gem Catenin-α-1 is essential for Chikungunya virus infection

Authors: Sanchari Chatterjee, Bharat Bhusan Subudhi, Soma Chattopadhyay

Source: Microbiology Spectrum, Vol 11, Iss 6 (2023)

Subject Terms: Chikungunya virus, Catenin-α-1, CHIKV-nsP2, co-immunoprecipitation, Microbiology, QR1-502

File Description: electronic resource

Relation: https://doaj.org/toc/2165-0497

Access URL: https://doaj.org/article/5987752e18654e7fa4885f7872024b9c

Removal of nonspecific binding proteins is required in co-immunoprecipitation with nuclear proteins

Authors: Xi Zeng, Wei-Hong Zeng, Jun Zhou, Xiao-Min Liu, Guo Huang, Hong Zhu, Shuai Xiao, Ying Zeng, Deliang Cao

Source: BioTechniques, Vol 73, Iss 6, Pp 289-296 (2022)

Subject Terms: agarose beads, co-immunoprecipitation, cytoplasmic and nuclear protein extraction, nonspecific binding proteins, NP-40, nuclear proteins, Biology (General), QH301-705.5

File Description: electronic resource

Relation: https://doaj.org/toc/0736-6205; https://doaj.org/toc/1940-9818

Access URL: https://doaj.org/article/1ad96a03ff364d0d87e58f8bfc8f8529

Global Profiling of 2-hydroxyisobutyrylome in Common Wheat

Authors: Ning Zhang, Lingran Zhang, Linjie Li, Junyou Geng, Lei Zhao, Yan Ren, Zhongdong Dong, Feng Chen

Source: Genomics, Proteomics & Bioinformatics, Vol 20, Iss 4, Pp 688-701 (2022)

Subject Terms: Post-translational modification, Lysine 2-hydroxyisobutyrylation, Common wheat, Proteomics, Co-immunoprecipitation, Biology (General), QH301-705.5, Computer applications to medicine. Medical informatics, R858-859.7

File Description: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S1672022921000073; https://doaj.org/toc/1672-0229

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Uncovering Novel Protein Partners of Inducible Nitric Oxide Synthase in Human Testis

Authors: Karthik S. Prabhakara, Kavya Ganapathy, Kazi N. Islam, Hiran M. Thyagarajan, Kirti K. Tiwari, Ramya L. Parimi, Mohammad B. Rashid

Source: Biomolecules, Vol 14, Iss 4, p 388 (2024)

Subject Terms: male infertility, nitric oxide synthase, protein–protein interaction, yeast two-hybrid assay, co-immunoprecipitation, Microbiology, QR1-502

File Description: electronic resource

Relation: https://www.mdpi.com/2218-273X/14/4/388; https://doaj.org/toc/2218-273X

Access URL: https://doaj.org/article/27777897766e4bd3984897704cddb8aa

Pro-Fibrotic Effects of CCL18 on Human Lung Fibroblasts Are Mediated via CCR6

Authors: Kerstin Höhne, Annett Wagenknecht, Corinna Maier, Peggy Engelhard, Torsten Goldmann, Stephan J. Schließmann, Till Plönes, Martin Trepel, Hermann Eibel, Joachim Müller-Quernheim, Gernot Zissel

Source: Cells, Vol 13, Iss 3, p 238 (2024)

Subject Terms: idiopathic pulmonary fibrosis, fibrogenesis, chemokine receptor, ligand-induced internalization, co-immunoprecipitation, collagen, Cytology, QH573-671

File Description: electronic resource

Relation: https://www.mdpi.com/2073-4409/13/3/238; https://doaj.org/toc/2073-4409

Access URL: https://doaj.org/article/10102b1572804799b83ef55da15bba37

Robust co-immunoprecipitation with mass spectrometry for Caenorhabditis elegans using solid-phase enhanced sample preparation

Authors: Gülkiz Baytek, Oliver Popp, Philipp Mertins, Baris Tursun

Source: BioTechniques, Vol 72, Iss 5, Pp 175-184 (2022)

Subject Terms: C. elegans, co-immunoprecipitation, FACT, HMG-3, HMG-4, mass spectrometry, Biology (General), QH301-705.5

File Description: electronic resource

Relation: https://doaj.org/toc/0736-6205; https://doaj.org/toc/1940-9818

Access URL: https://doaj.org/article/564122ebeb0549fd830bd5d5627d1925

Thylakoid Rhodanese-like Protein–Ferredoxin:NADP+ Oxidoreductase Interaction Is Integrated into Plant Redox Homeostasis System

Authors: Lea Vojta, Anja Rac-Justament, Bernd Zechmann, Hrvoje Fulgosi

Source: Antioxidants, Vol 12, Iss 10, p 1838 (2023)

Subject Terms: ROS, superoxide, redox homeostasis, stress response, co-immunoprecipitation, glutathione, Therapeutics. Pharmacology, RM1-950

File Description: electronic resource

Relation: https://www.mdpi.com/2076-3921/12/10/1838; https://doaj.org/toc/2076-3921

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Proteomic analysis of Fasciola gigantica excretory and secretory products (FgESPs) co-immunoprecipitated using a time course of infected buffalo sera

Authors: Mengwei Zheng, Xuelian Jiang, Xinping Kong, Yanfeng Guo, Weiyu Zhang, Wenda Di

Source: Frontiers in Microbiology, Vol 13 (2022)

Subject Terms: Fasciola gigantica, co-immunoprecipitation, excretory and secretory products, interaction, LC–MS/MS, screening, Microbiology, QR1-502

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fmicb.2022.1089394/full; https://doaj.org/toc/1664-302X

Access URL: https://doaj.org/article/838775fd09fe4cfb8135d7a990983dc5

Family Iridoviridae Molecular and Ecological Studies of a Family Infecting Invertebrates and Ectothermic Vertebrates

Authors: Chinchar, Gregory, Duffus, Amanda

Subject Terms: QH301-705.5, Q1-390, risk assessment, CQIV, mathematical models, amphibian, iridovirus, ISDL, Exopalaemon carinicauda, viral load, virus isolation, European chub, outbreak, Unconventional T cell, early detection, susceptible species, viral immune evasion, DNA virus, Rana grylio virus, antibody, intracellular localization, Rana grylio virus (RGV), British Columbia, Iridoviridae, Andrias davidianus ranavirus, viral infection, susceptible-infected (SI) models, yeast two-hybrid (Y2H), prevalence, host-pathogen interactions, Pacific herring, Procambarus clarkii, Bayesian inference, eDNA, amphibians, Artemia spp., ranavirosis, cross-species transmission, FV3, SHIV, Gryllus bimaculatus, Pacific salmon, NF-?B, cricket, IIV-6, virus binding, erythrocytic necrosis virus (ENV), envelope protein, iridovirus core proteins, emerging infection, host, Ranavirus, white head, Rana temporaria, Imd, biosecurity, antiviral immunity, Decapodiridovirus, endemic disease, Macrobrachium rosenbergii, co-immunoprecipitation (Co-IP), Common frog, aquatic animals, virus surveillance, immunomodulators, frog virus 3, ELISA, DIV1, megalocytivirus, Lymphocystis disease virus, bearded dragon, susceptibility, protein interaction, Pogona vitticeps, viral erythrocytic necrosis (VEN), histopathology, epidemiology, native-fish conservation, viral transmission, Sparus aurata, immunohistochemistry, lizard, disease dynamics, immunofluorescence, transmission modelling, Macrobrachium nipponense, interferon, nonclassical MHC, heparan sulfate, ranavirus, Mexico, Biology, life sciences

File Description: application/octet-stream

Access URL: https://directory.doabooks.org/handle/20.500.12854/47395
https://mdpi.com/books/pdfview/book/1647

Interaction of porcine circovirus-like virus P1 capsid protein with host proteins

Authors: Libin Wen, Jiaping Zhu, Fengxi Zhang, Qi Xiao, Jianping Xie, Kongwang He

Source: BMC Veterinary Research, Vol 17, Iss 1, Pp 1-9 (2021)

Subject Terms: Porcine circovirus-like virus P1, yeast two-hybrid assay, Cap, cellular protein, co-immunoprecipitation, Veterinary medicine, SF600-1100

File Description: electronic resource

Relation: https://doaj.org/toc/1746-6148

Access URL: https://doaj.org/article/9211d7f8d85a4497a086dceb5e8451b7

Calcium/calmodulin-dependent protein kinase II associates with the K+ channel isoform Kv4.3 in adult rat optic nerve

Authors: Genki Ogata, Gloria J. Partida, Anna Fasoli, Andrew T. Ishida

Source: Frontiers in Neuroanatomy, Vol 16 (2022)

Subject Terms: Kv4.3, CaMKII, 4-aminopyridine, co-immunoprecipitation, immunohistochemistry, conduction velocity, Neurosciences. Biological psychiatry. Neuropsychiatry, RC321-571, Human anatomy, QM1-695

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fnana.2022.958986/full; https://doaj.org/toc/1662-5129

Access URL: https://doaj.org/article/490b6a59a8634815881bb16755433c2c

The Ebola Virus VP30-NP Interaction Is a Regulator of Viral RNA Synthesis

Contributors: Schnell, Matthias [Jefferson Univ., Philadelphia, PA (United States)]

Source: PLoS Pathogens; 12; 10

File Description: Medium: ED; Size: Article No. e1005937

Access URL: http://www.osti.gov/scitech/servlets/purl/1351391

Immunoprecipitation and mass spectrometry define TET1 interactome during oligodendrocyte differentiation

Authors: Ming Zhang, Kaixiang Zhang, Jian Wang, Yuming Liu, Guangxin Liu, Weilin Jin, Shengxi Wu, Xianghui Zhao

Source: Cell & Bioscience, Vol 10, Iss 1, Pp 1-11 (2020)

Subject Terms: Oligodendrocyte, TET1, DNA dioxygenase, Mass spectrometry, Co-immunoprecipitation, Biotechnology, TP248.13-248.65, Biology (General), QH301-705.5, Biochemistry, QD415-436

File Description: electronic resource

Relation: http://link.springer.com/article/10.1186/s13578-020-00473-5; https://doaj.org/toc/2045-3701

Access URL: https://doaj.org/article/f0586f9bf5e94a618641d2dedeb8f518

Eukaryotic expression, Co-IP and MS identify BMPR-1B protein–protein interaction network

Authors: Jianlei Jia, Jipeng Jin, Qian Chen, Zan Yuan, Haiqin Li, Junhao Bian, Linsheng Gui

Source: Biological Research, Vol 53, Iss 1, Pp 1-13 (2020)

Subject Terms: Sheep, BMPR-1B, Co-immunoprecipitation, Mass spectrometry, Protein–protein interaction, Biology (General), QH301-705.5

File Description: electronic resource

Relation: http://link.springer.com/article/10.1186/s40659-020-00290-7; https://doaj.org/toc/0717-6287

Access URL: https://doaj.org/article/c6575b276c0a46bd90447a40658ddb6e

Identification of protein inhibitor of activated STAT 4, a novel host interacting partner that involved in bovine viral diarrhea virus growth

Authors: Xiaowei Gong, Qiwei Chen, Fuying Zheng

Source: Virology Journal, Vol 17, Iss 1, Pp 1-11 (2020)

Subject Terms: BVDV C protein, Yeast two-hybrid, PIAS4, RNA interference, Co-immunoprecipitation, Infectious and parasitic diseases, RC109-216

File Description: electronic resource

Relation: http://link.springer.com/article/10.1186/s12985-020-01330-0; https://doaj.org/toc/1743-422X

Access URL: https://doaj.org/article/d835e21d610a472fa1168d86c3971298

Rhesus Macaque Activating Killer Immunoglobulin-Like Receptors Associate With Fc Receptor Gamma (FCER1G) and Not With DAP12 Adaptor Proteins Resulting in Stabilized Expression and Enabling Signal Transduction

Authors: Mohammad Zahidul Hasan, Lutz Walter

Source: Frontiers in Immunology, Vol 12 (2021)

Subject Terms: adaptor association, Co-immunoprecipitation (co-IP), rhesus macaque (Macaca mulatta), DAP12, FCER1G, activating KIR, Immunologic diseases. Allergy, RC581-607

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fimmu.2021.678964/full; https://doaj.org/toc/1664-3224

Access URL: https://doaj.org/article/a8ed83fb049e4e1dbbdd8473fc2ab2f1