Comparative analysis of chloroplast genomes reveals molecular evolution and phylogenetic relationships within the Papilionoideae of Fabaceae.

Authors: Qin, Qian¹ (AUTHOR) gfq1106@163.com, Dong, Yanjing¹ (AUTHOR) 990464593@qq.com, Chen, Jialong¹ (AUTHOR) 2653853403@qq.com, Wang, Bo¹ (AUTHOR) 3220857352@qq.com, Peng, Yuxin¹ (AUTHOR) pengyuxin@jxutcm.edu.cn, Zhang, XinPeng¹ (AUTHOR) zhangxinpeng@jxutcm.edu.cn, Wang, Xiaoyun¹ (AUTHOR) 20101017@jxutcm.edu.cn, Zeng, Jinxiang¹ (AUTHOR) 20070958@jxutcm.edu.cn, Zhong, Guoyue¹ (AUTHOR) 20111025@jxutcm.edu.cn, Zhang, Shouwen¹ (AUTHOR) wtzsw@163.com, Du, Xiaolang¹ (AUTHOR) 20131059@jxutcm.edu.cn

Source: BMC Plant Biology. 2/7/2025, Vol. 25 Issue 1, p1-20. 20p.

Subject Terms: *MOLECULAR evolution, *CHLOROPLAST DNA, *LIFE sciences, *LEGUMES, *GENOMICS

Complete chloroplast genomes of 13 species of the Impatiens genus for genomic features and phylogenetic relationships studies.

Authors: Yong, Qinqin¹ (AUTHOR), Li, Meijun¹ (AUTHOR), Li, Zhi¹ (AUTHOR), Luo, Chao¹ (AUTHOR), Zhang, Jinling² (AUTHOR), Bai, Xinxiang¹ (AUTHOR) xxbai@gzu.edu.cn

Source: Scientific Reports. 2/4/2025, Vol. 15 Issue 1, p1-14. 14p.

Subject Terms: *CHLOROPLAST DNA, *CLADISTIC analysis, *ORNAMENTAL plants, *LIFE sciences, *GENETIC barcoding, *GEOLOGIC hot spots

Comparative Genomics of Bryopsis hypnoides : Structural Conservation and Gene Transfer Between Chloroplast and Mitochondrial Genomes.

Authors: Liu, Ziwen^1,2 (AUTHOR) liuziwen9903@gmail.com, Fan, Xiao^1,3 (AUTHOR) fanxiao@ysfri.ac.cn, Wu, Yukun¹ (AUTHOR) wuyukun@stu.ouc.edu.cn, Zhang, Wei¹ (AUTHOR) zhangwei9007@stu.ouc.edu.cn, Zhang, Xiaowen¹ (AUTHOR) zhangxw@ysfri.ac.cn, Xu, Dong¹ (AUTHOR) xudong@ysfri.ac.cn, Wang, Yitao¹ (AUTHOR) wangyt@ysfri.ac.cn, Sun, Ke¹ (AUTHOR) sunke@ysfri.ac.cn, Wang, Wei¹ (AUTHOR) wangwei@ysfri.ac.cn, Ye, Naihao^1,3 (AUTHOR) yenh@ysfri.ac.cn

Source: Biomolecules (2218-273X). Feb2025, Vol. 15 Issue 2, p278. 18p.

Subject Terms: *MITOCHONDRIAL DNA, *CHLOROPLAST DNA, *GENETIC transformation, *OXIDATIVE phosphorylation, *GREEN algae

Molecular phylogeny and comparative chloroplast genome analysis of the type species Crucigenia quadrata.

Authors: Wang, Ting¹ (AUTHOR), Feng, Huan¹ (AUTHOR), Zhu, Huan² (AUTHOR), Zhong, Bojian¹ (AUTHOR) bjzhong@gmail.com

Source: BMC Plant Biology. 1/16/2025, Vol. 25 Issue 1, p1-13. 13p.

Subject Terms: *COMPARATIVE genetics, *CHLOROPLAST DNA, *GENETIC variation, *GENOMICS, *LIFE sciences

Chloroplast Genome Diversity and Molecular Evolution in Hypericaceae: New Insights from Three Hypericum Species.

Authors: Yan, Kan¹ (AUTHOR) lu_xin2022@163.com, Lu, Xin¹ (AUTHOR) liwandi2022@163.com, Li, Wandi¹ (AUTHOR) fxq092424@163.com, Sun, Chao² (AUTHOR) sunc@gsau.edu.cn, Zhou, Xueqiong¹ (AUTHOR) idafnj@163.com, Wang, Youyou¹ (AUTHOR)

Source: International Journal of Molecular Sciences. Jan2025, Vol. 26 Issue 1, p323. 28p.

Subject Terms: *CHLOROPLAST DNA, *MOLECULAR evolution, *GENOMICS, *GENOME size, *HYPERICUM, *COMPARATIVE genomics

Comparative chloroplast genomics of Caryophyllaceae species: insights into sequence variations and phylogenetic evolution.

Authors: Yang, Lucun¹ (AUTHOR) yanglucun@nwipb.cas.cn, Zhu, Yongqing² (AUTHOR), Hua, Qing³ (AUTHOR)

Source: BMC Plant Biology. 12/27/2024, Vol. 24 Issue 1, p1-23. 23p.

Subject Terms: *CHLOROPLAST DNA, *WHOLE genome sequencing, *NATURAL selection, *CARYOPHYLLACEAE, *LIFE sciences, *COMPARATIVE genomics

Morpho-taxonomy and molecular intrusion!

Authors: Venu, Potharaju¹ pvenu.bsi@gmail.com, Sanjappa, Munivenkatappa²

Source: Current Science (00113891). 12/25/2024, Vol. 127 Issue 12, p1397-1402. 6p.

Subject Terms: *CHLOROPLAST DNA, *NUCLEAR DNA, *DNA analysis, *ELECTRONIC data processing, *HERBARIA

Exploring the phylogenetic framework and trait evolution of Impatiens through chloroplast genome analysis.

Authors: Lan, Wen-Xiang¹ (AUTHOR), Mo, Qing¹ (AUTHOR), Jin, Meng-Meng¹ (AUTHOR), Wen, Yong-Hui¹ (AUTHOR), Yang, Meng-Qing¹ (AUTHOR), Ma, Hui¹ (AUTHOR), Huang, Hai-Quan¹ (AUTHOR) haiquan_huang@swfu.edu.cn, Huang, Mei-Juan¹ (AUTHOR) meijuanhuang@swfu.edu.cn

Source: BMC Plant Biology. 12/20/2024, Vol. 24 Issue 1, p1-18. 18p.

Subject Terms: *BIOLOGICAL evolution, *CHLOROPLAST DNA, *LIFE cycles (Biology), *WHOLE genome sequencing, *GENOME size

COMPLETE CHLOROPLAST GENOME SEQUENCE OF A NOVEL WITHANIA SOMNIFERA (L.) DUNAL: COMPARATIVE GENOMICS AND PHYLOGENETIC INSIGHTS.

Authors: ALSUHAIMI, NADIA MOHAMMAD¹, ALI, MOHAMMAD AJMAL¹ alimohammad@ksu.edu.sa, ALWAHIBI, MONA SOLAIMAN¹, AHMED, SHEIKH SUNZID², RAHMAN, M. OLIUR² oliur.bot@du.ac.bd, PANDEY, SHANKAR KUMAR³, ELSHIKH, MOHAMED S.¹, ALSHALLALI, SAYFI RASHED SAYFI⁴, JOONGKU LEE⁵, SOO-YONG KIM⁶

Source: Bangladesh Journal of Plant Taxonomy. Dec2024, Vol. 31 Issue 2, p205-223. 19p.

Subject Terms: *CHLOROPLAST DNA, *MICROSATELLITE repeats, *WHOLE genome sequencing, *WITHANIA somnifera, *TRANSFER RNA, *COMPARATIVE genomics

Comprehensive characterization and phylogenetic analysis of the complete plastomes of two ant–orchids, Caularthron bicornutum and Myrmecophila thomsoniana.

Authors: Li, Jin-Wei¹ (AUTHOR), Li, Ru-Yi¹ (AUTHOR), Chen, Yu-Ming¹ (AUTHOR), Wu, Yu-Han¹ (AUTHOR), Zou, Long-Hai² (AUTHOR), Tang, Shu-Ling^1,3 (AUTHOR) fjzzztsl@126.com, Zhai, Jun-Wen¹ (AUTHOR) zhai-jw@163.com

Source: BMC Plant Biology. 11/29/2024, p1-13. 13p.

Subject Terms: *CHLOROPLAST DNA, *GENOME size, *GENETIC barcoding, *PHYLOGENY, *MICROSATELLITE repeats

Chloroplast genome of four Amorphophallus species: genomic features,comparative analysis, and phylogenetic relationships among Amorphophallus species.

Authors: Li, Li-Fang¹ (AUTHOR), Yang, Min¹ (AUTHOR), Qi, Ying¹ (AUTHOR), Gao, Peng-Hua¹ (AUTHOR), Yang, Shao-Wu¹ (AUTHOR), Zhao, Yong-Teng¹ (AUTHOR), Guo, Jian-Wei¹ (AUTHOR), Wei, Huan-Yu¹ (AUTHOR), Liu, Jia-Ni¹ (AUTHOR), Zhao, Jian-Rong¹ (AUTHOR), Huang, Fei-Yan¹ (AUTHOR) 125593879@qq.com, Yu, Lei¹ (AUTHOR) yulei0425@163.com

Source: BMC Genomics. 11/21/2024, Vol. 25 Issue 1, p1-20. 20p.

Subject Terms: *MICROSATELLITE repeats, *CHLOROPLAST DNA, *AMORPHOPHALLUS, *GENOMICS, *MOLECULAR structure, *KONJAK

Complete Mitogenome Assembly and Comparative Analysis of Vaccinium bracteatum (Ericaceae), a Rich Source of Health-Promoting Molecules.

Authors: Zhou, Peng¹ (AUTHOR) zpjsslky@163.com, Li, Fei¹ (AUTHOR) 13886176450@163.com, Zhang, Qiang² (AUTHOR) zhangqiang@njfu.edu.cn, Zhang, Min¹ (AUTHOR) zhangqiang@njfu.edu.cn

Source: International Journal of Molecular Sciences. Nov2024, Vol. 25 Issue 22, p12027. 20p.

Subject Terms: *CHLOROPLAST DNA, *RNA editing, *GERMPLASM, *PSEUDOGENES, *PLANT breeding

Hybrid Origin of × Leymotrigia bergrothii (Poaceae) as Revealed by Analysis of the Internal Transcribed Spacer ITS1 and trn L Sequences.

Authors: Punina, Elizaveta O.¹ (AUTHOR) a.gnutikov@vir.nw.ru, Gnutikov, Alexander A.^1,2 (AUTHOR) nnosov@binran.ru, Nosov, Nikolai N.¹ (AUTHOR) shneyer@binran.ru, Shneyer, Victoria S.¹ (AUTHOR) avrodionov@binran.ru, Rodionov, Alexander V.¹ (AUTHOR)

Source: International Journal of Molecular Sciences. Nov2024, Vol. 25 Issue 22, p11966. 15p.

Subject Terms: *CHLOROPLAST DNA, *POLLEN, *MOLECULAR phylogeny, *CHROMOSOMES, *POLYMORPHISM (Zoology)

Comparative Analyses of the Complete Mitogenomes of Two Oxyria Species (Polygonaceae) Provide Insights into Understanding the Mitogenome Evolution Within the Family.

Authors: Li, Lijuan^1,2,3 (AUTHOR) lilijuan18@mails.ucas.ac.cn, Jiang, Zhuo^1,2,3 (AUTHOR) jiangzhuo19991@163.com, Xiong, Ye^1,2,3 (AUTHOR) xiongye23@mails.ucas.ac.cn, Akogwu, Caleb Onoja^1,2,3 (AUTHOR) acalebonoja@mails.ucas.ac.cn, Tolulope, Olutayo Mary^1,2,3 (AUTHOR) olutayotolulope42@gmail.com, Zhou, Hao⁴ (AUTHOR) d201477433@alumni.hust.edu.cn, Sun, Yanxia^1,2 (AUTHOR) sunyanxia@wbgcas.cn, Wang, Hengchang^1,2 (AUTHOR) hcwang@wbgcas.cn, Zhang, Huajie^1,2 (AUTHOR) hcwang@wbgcas.cn

Source: International Journal of Molecular Sciences. Nov2024, Vol. 25 Issue 22, p11930. 18p.

Subject Terms: *MICROSATELLITE repeats, *CHLOROPLAST DNA, *GENETIC transformation, *CHINESE medicine, *HERBAL medicine

Chloroplast genome characteristic, comparative and phylogenetic analyses in Capsicum (Solanaceae).

Authors: He, Shuilian^1,2 (AUTHOR), Siman, Yinqi¹ (AUTHOR), Li, Gengyun¹ (AUTHOR), Lv, Junheng^1,2 (AUTHOR) Junhenglv@163.com, Zhao, Kai^1,2 (AUTHOR) kailixian1023@aliyun.com, Deng, Minghua^1,2 (AUTHOR) 173179905@qq.com

Source: BMC Genomics. 11/7/2024, Vol. 25 Issue 1, p1-16. 16p.

Subject Terms: *CHLOROPLAST DNA, *GENETIC variation, *PEPPERS, *NUMBERS of species, *RIBOSOMAL RNA, *TRANSFER RNA

Comparative Chloroplast Genome Analysis in High-Yielding Pinus kesiya var. langbianensis.

Authors: Wang, Dong¹ (AUTHOR) wangdong@yafg.ac.cn, Wang, Yi¹ (AUTHOR) wangyi@yafg.ac.cn, Yuan, Xiaolong¹ (AUTHOR), Chen, Wei¹ (AUTHOR), Li, Jiang¹ (AUTHOR) wangyi@yafg.ac.cn

Source: Diversity (14242818). Nov2024, Vol. 16 Issue 11, p665. 14p.

Subject Terms: *CHLOROPLAST DNA, *TRINUCLEOTIDE repeats, *GENOME size, *ENDEMIC species, *PINE

Complete chloroplast genome sequence and characteristic analysis of Paeonia suffruticosa from the lower reaches of the Yangtze River basin.

Authors: Jiaqiang ZHANG¹ zhangqiang414@126.com, Kaiyuan ZHU¹ kyzhu1999@163.com, Huichun LIU¹ lhuichun@163.com, Xiao WAN¹ xuwenting_1128@126.com, Wenting XU¹ wanxiaoww@163.com

Source: Notulae Botanicae Horti Agrobotanici Cluj-Napoca. Oct-Dec2024, Vol. 52 Issue 4, p1-19. 19p.

Subject Terms: *BIOLOGICAL evolution, *CHLOROPLAST DNA, *WHOLE genome sequencing, *MICROSATELLITE repeats, *GENETIC variation

Comparative Analysis of the Codon Usage Pattern in the Chloroplast Genomes of Gnetales Species.

Authors: Yang, Xiaoming¹ (AUTHOR) xmyang@njfu.edu.cn, Wang, Yuan^1,2 (AUTHOR) researchfile@njfu.edu, Gong, Wenxuan² (AUTHOR) 13015209918@163.com, Li, Yinxiang² (AUTHOR)

Source: International Journal of Molecular Sciences. Oct2024, Vol. 25 Issue 19, p10622. 17p.

Subject Terms: *CHLOROPLAST DNA, *GENE expression, *NATURAL selection, *HOST plants, *TOBACCO

Influence of Primary Light Exposure on the Morphophysiological Characteristics and Phenolic Compounds Accumulation of a Tea Callus Culture (Camellia sinensis L.).

Authors: Zubova, Maria Y.¹ (AUTHOR) mariia.zubova@yandex.ru, Goncharuk, Evgenia A.¹ (AUTHOR) nechaevatatyana.07@yandex.ru, Nechaeva, Tatiana L.¹ (AUTHOR) akse.masha@yandex.ru, Aksenova, Maria A.¹ (AUTHOR) vera@katanski.com, Zaitsev, Georgiy P.² (AUTHOR) gorg-83@mail.ru, Katanskaya, Vera M.¹ (AUTHOR) k.v.-90@mail.ru, Kazantseva, Varvara V.¹ (AUTHOR), Zagoskina, Natalia V.¹ (AUTHOR) mariia.zubova@yandex.ru

Source: International Journal of Molecular Sciences. Oct2024, Vol. 25 Issue 19, p10420. 23p.

Subject Terms: *HIGH performance liquid chromatography, *CHLOROPLAST formation, *PHOTOSYNTHETIC pigments, *PHENOLS, *LIGHT intensity

Chloroplast Genome Variation and Phylogenetic Relationships of Autochthonous Varieties of Vitis vinifera from the Don Valley.

Authors: Sharko, F. S.¹ (AUTHOR) fedosic@gmail.com, Petrova, K. O.¹ (AUTHOR), Patrushev, M. V.¹ (AUTHOR), Fedosov, D. Y.¹ (AUTHOR), Toshchakov, S. V.¹ (AUTHOR)

Source: International Journal of Molecular Sciences. Sep2024, Vol. 25 Issue 18, p9928. 17p.

Subject Terms: *CHLOROPLAST DNA, *GENOMICS, *SEQUENCE analysis, *MICROSATELLITE repeats, *CULTURAL property