Liquid biopsy: paving a new avenue for cancer research

Authors: Keerthi Kurma, Zahra Eslami-S, Catherine Alix-Panabières, Laure Cayrefourcq

Source: Cell Adhesion & Migration, Vol 18, Iss 1, Pp 1-26 (2024)

Subject Terms: Liquid biopsy, biomarkers, circulating tumor cells, circulating free or tumor DNA, circulating cell-free RNA, extracellular vesicles, Cytology, QH573-671

File Description: electronic resource

Relation: https://doaj.org/toc/1933-6918; https://doaj.org/toc/1933-6926

Access URL: https://doaj.org/article/b7118325b17245c287999434d5a09777

Detection of reproducible liver cancer specific ligand-receptor signaling in blood

Authors: Aram Safrastyan, Damian Wollny

Source: Frontiers in Bioinformatics, Vol 4 (2025)

Subject Terms: liquid biopsy, liver cancer, cell-cell interaction, single-cell RNA sequencing, cell-free RNA, bioinformatics, Computer applications to medicine. Medical informatics, R858-859.7

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fbinf.2024.1332782/full; https://doaj.org/toc/2673-7647

Access URL: https://doaj.org/article/0e5cc25b26ce4af5a0b8cf7a7bff6f8d

Identification of syncytiotrophoblast-derived cf-RNA OPA1 to predict the occurrence of preeclampsia

Authors: Pei, Zhongrui ^a, Tang, Huirong ^b, Wu, Jing ^a, Wang, Jie ^a, Liu, Dan ^b, Cao, Chenrui ^b, Pan, Weichen ^c, Li, Taishun ^b, Duan, Honglei ^b, Wang, Zhiyin ^b, Zheng, Mingming ^{b, ⁎⁎}, Hu, Yali ^{b, ⁎⁎⁎}, Zhao, Guangfeng ^{a, b, ⁎}

Source: In Placenta February 2025 160:1-10

Expanding the clinical utility of liquid biopsy by using liquid transcriptome and artificial intelligence

Authors: Maher Albitar, Ahmad Charifa, Sally Agersborg, Andrew Pecora, Andrew Ip, Andre Goy

Source: The Journal of Liquid Biopsy, Vol 6, Iss , Pp 100270- (2024)

Subject Terms: Liquid biopsy, cell-free DNA (cfDNA), cell-free RNA (cfRNA), Cancer diagnosis, Next generation sequencing, Artificial intelligence (AI), Medicine

File Description: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S295019542400136X; https://doaj.org/toc/2950-1954

Access URL: https://doaj.org/article/befa01532a904e60b8fd727cf648cb17

Preservation of cfRNA in cytological supernatants for cfDNA & cfRNA double detection in non‐small cell lung cancer patients

Authors: Yidan Ma, Yifei Wang, Lei He, Jun Du, Lin Li, Zhixin Bie, Yuanming Li, Xiaomao Xu, Wei Zhou, Xiaonan Wu, Li Yang, Jing Di, Chenyang Li, Xiaoguang Li, Dongge Liu, Zheng Wang

Source: Cancer Medicine, Vol 13, Iss 17, Pp n/a-n/a (2024)

Subject Terms: cell‐free RNA, driver gene, fusion, liquid biopsy, NSCLC, Neoplasms. Tumors. Oncology. Including cancer and carcinogens, RC254-282

File Description: electronic resource

Relation: https://doaj.org/toc/2045-7634

Access URL: https://doaj.org/article/d9320a6490a045b5af3bb7c1d5f0811e

Depletion‐assisted multiplexed cell‐free RNA sequencing reveals distinct human and microbial signatures in plasma versus extracellular vesicles

Authors: Hongke Wang, Qing Zhan, Meng Ning, Hongjie Guo, Qian Wang, Jiuliang Zhao, Pengfei Bao, Shaozhen Xing, Shanwen Chen, Shuai Zuo, Xuefeng Xia, Mengtao Li, Pengyuan Wang, Zhi John Lu

Source: Clinical and Translational Medicine, Vol 14, Iss 7, Pp n/a-n/a (2024)

Subject Terms: cell‐free RNA, extracellular vesicles, liquid biopsy, cancer classification, Medicine (General), R5-920

File Description: electronic resource

Relation: https://doaj.org/toc/2001-1326

Access URL: https://doaj.org/article/d09d4bf7b0c542629f47e87b8cb08e30

Single‐tube two‐pronged approach using both cell‐free DNA and RNA for multimodal biomarker tests at the time of biopsy

Authors: Shu‐Ti Lin, Hung‐Chih Lai, Chen Yeh

Source: Precision Medical Sciences, Vol 12, Iss 4, Pp 233-241 (2023)

Subject Terms: cell‐free DNA, cell‐free RNA, liquid biopsy, NGS, RT‐qPCR, time to treatment initiation, Neoplasms. Tumors. Oncology. Including cancer and carcinogens, RC254-282

File Description: electronic resource

Relation: https://doaj.org/toc/2642-2514

Access URL: https://doaj.org/article/20499a8718894ac4b97aabcfa6fc9c32

Decoding cell-type contributions to the cfRNA transcriptomic landscape of liver cancer

Authors: Aram Safrastyan, Christian Höner zu Siederdissen, Damian Wollny

Source: Human Genomics, Vol 17, Iss 1, Pp 1-14 (2023)

Subject Terms: Liver cancer, Liquid biopsy, Cellular deconvolution, Cell-free RNA, Single-cell sequencing, Modeling, Medicine, Genetics, QH426-470

File Description: electronic resource

Relation: https://doaj.org/toc/1479-7364

Access URL: https://doaj.org/article/f311dd382060406492d100580c22ef8e

Preliminary insights into RNA in CSF of pediatric SMA patients after 6 months of nusinersen

Authors: M. Garofalo, S. Bonanno, S. Marcuzzo, C. Pandini, E. Scarian, F. Dragoni, R. Di Gerlando, M. Bordoni, S. Parravicini, C. Gellera, R. Masson, C. Dosi, R. Zanin, O. Pansarasa, C. Cereda, A. Berardinelli, S. Gagliardi

Source: Biology Direct, Vol 18, Iss 1, Pp 1-13 (2023)

Subject Terms: Spinal muscular atrophy, Nusinersen, Cell-free RNA, Transcriptomics, Biology (General), QH301-705.5

File Description: electronic resource

Relation: https://doaj.org/toc/1745-6150

Access URL: https://doaj.org/article/0ff59cd735f7435a9c27ce79fa0cf826

Blood-based liquid biopsy: insights into early detection, prediction, and treatment monitoring of bladder cancer

Authors: Shijie Li, Kerong Xin, Shen Pan, Yang Wang, Jianyi Zheng, Zeyu Li, Xuefeng Liu, Bitian Liu, Zhenqun Xu, Xiaonan Chen

Source: Cellular & Molecular Biology Letters, Vol 28, Iss 1, Pp 1-37 (2023)

Subject Terms: Bladder cancer, Liquid biopsy, Circulating tumor cells, Circulating tumor DNA, Cell-free RNA, Exosomes, Cytology, QH573-671

File Description: electronic resource

Relation: https://doaj.org/toc/1689-1392

Access URL: https://doaj.org/article/84a91a073d314e8b912269c79f64ee37

Identification of novel cell-free RNAs in maternal plasma as preterm biomarkers in combination with placental RNA profiles

Authors: Heyue Jin, Yimin Zhang, Zhigang Fan, Xianyan Wang, Chen Rui, Shaozhen Xing, Hongmei Dong, Qunan Wang, Fangbiao Tao, Yumin Zhu

Source: Journal of Translational Medicine, Vol 21, Iss 1, Pp 1-12 (2023)

Subject Terms: Preterm birth, Prediction, Cell-free RNA, Placenta, Plasma, Transcriptome, Medicine

File Description: electronic resource

Relation: https://doaj.org/toc/1479-5876

Access URL: https://doaj.org/article/570fac87850d475caf3a985d758d5298

A systematic literature review and meta-analysis of circulating nucleic acids as biomarkers in psychiatry

Authors: Verebi, Camille ^{a, b}, Nectoux, Juliette ^a, Gorwood, Philip ^{b, c}, Le Strat, Yann ^d, Duriez, Philibert ^{b, c}, Ramoz, Nicolas ^b, Bienvenu, Thierry ^{a, b, ⁎}

Source: In Progress in Neuropsychopharmacology & Biological Psychiatry 13 July 2023 125

Pancreatic Tissue Dissection to Isolate Viable Single Cells

Authors: Oshri Yosefov-Levi, author¹, Sharona Tornovsky, author¹, Oren Parnas, author¹

Source: Journal of Visualized Experiments. (195)

Availability: http://www.jove.com/video/64871

Liquid biopsy by analysis of circulating myeloma cells and cell-free nucleic acids: a novel noninvasive approach of disease evaluation in multiple myeloma

Authors: Shuchan Li, Enfan Zhang, Zhen Cai

Source: Biomarker Research, Vol 11, Iss 1, Pp 1-26 (2023)

Subject Terms: Multiple myeloma, Liquid biopsy, Circulating tumor cell, Cell-free DNA, Cell-free RNA, Therapeutics. Pharmacology, RM1-950

File Description: electronic resource

Relation: https://doaj.org/toc/2050-7771

Access URL: https://doaj.org/article/acad795dd2d34a3f95146a877c82982b

Combining cell-free RNA with cell-free DNA in liquid biopsy for hematologic and solid tumors

Authors: Albitar, Maher ^{a, ∗}, Zhang, Hong ^a, Charifa, Ahmad ^a, Ip, Andrew ^b, Ma, Wanlong ^a, McCloskey, James ^b, Donato, Michele ^b, Siegel, David ^b, Waintraub, Stanley ^b, Gutierrez, Martin ^b, Pecora, Andrew ^b, Goy, Andre ^b

Source: In Heliyon May 2023 9(5)

Exploring the cell-free total RNA transcriptome in diffuse large B-cell lymphoma and primary mediastinal B-cell lymphoma patients as biomarker source in blood plasma liquid biopsies

Authors: Philippe Decruyenaere, Edoardo Giuili, Kimberly Verniers, Jasper Anckaert, Katrien De Grove, Malaïka Van der Linden, Dries Deeren, Jo Van Dorpe, Fritz Offner, Jo Vandesompele

Source: Frontiers in Oncology, Vol 13 (2023)

Subject Terms: cell-free RNA, liquid biopsy, blood plasma, biomarkers, DLBCL, diffuse large B-cell lymphoma, Neoplasms. Tumors. Oncology. Including cancer and carcinogens, RC254-282

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fonc.2023.1221471/full; https://doaj.org/toc/2234-943X

Access URL: https://doaj.org/article/2c87a35fc9414d3b8bd1a3f9d2605b45

A Comprehensive Review on Circulating cfRNA in Plasma: Implications for Disease Diagnosis and Beyond

Authors: Pengqiang Zhong, Lu Bai, Mengzhi Hong, Juan Ouyang, Ruizhi Wang, Xiaoli Zhang, Peisong Chen

Source: Diagnostics, Vol 14, Iss 10, p 1045 (2024)

Subject Terms: cell-free RNA, liquid biopsies, Medicine (General), R5-920

File Description: electronic resource

Relation: https://www.mdpi.com/2075-4418/14/10/1045; https://doaj.org/toc/2075-4418

Access URL: https://doaj.org/article/be7e0c1559d440fd920f05a296854149

Digital PCR-based evaluation of nucleic acid extraction kit performance for the co-purification of cell-free DNA and RNA

Authors: Jill Deleu, Kathleen Schoofs, Anneleen Decock, Kimberly Verniers, Sofie Roelandt, Angie Denolf, Joke Verreth, Bram De Wilde, Tom Van Maerken, Katleen De Preter, Jo Vandesompele

Source: Human Genomics, Vol 16, Iss 1, Pp 1-14 (2022)

Subject Terms: Liquid biopsies, Co-purification, Cell-free RNA, Extracellular RNA, Cell-free DNA, Mutation detection, Medicine, Genetics, QH426-470

File Description: electronic resource

Relation: https://doaj.org/toc/1479-7364

Access URL: https://doaj.org/article/ef68bffeabae4ba1a11a505e8f590a7c

Biomarker potential of the GRP78 cell-free RNA in endometrial cancer

Authors: Busra Aynekin, Hilal Akalin, I. Ipek Muderris, Gokhan Acmaz, Hulya Akgun, Izem Olcay Şahin, Nuriye Coşkun Gokce, Zahraa Alzaidi, Gözde Erturk Zararsiz, Yusuf Ozkul, Munis Dundar, Çetin Saatci

Source: Egyptian Journal of Medical Human Genetics, Vol 23, Iss 1, Pp 1-6 (2022)

Subject Terms: Endometrium cancer, GRP78, Cell-free RNA, Medicine (General), R5-920, Genetics, QH426-470

File Description: electronic resource

Relation: https://doaj.org/toc/2090-2441

Access URL: https://doaj.org/article/8e2dcfbb42284ac5b9fcf6fc2d604e86

Clinical applications of liquid biopsy in HPV-negative and HPV-positive head and neck squamous cell carcinoma: advances and challenges

Authors: Mariana Chantre-Justino, Gilda Alves, Lucas Delmonico

Source: Exploration of Targeted Anti-tumor Therapy, Vol 3, Iss 4, Pp 533-552 (2022)

Subject Terms: head and neck squamous cell carcinomas, liquid biopsy, cell-free dna/cell-free rna, microrna, circulating tumor cells, extracellular vesicles, Internal medicine, RC31-1245

File Description: electronic resource

Relation: https://www.explorationpub.com/Journals/etat/Article/100299; https://doaj.org/toc/2692-3114

Access URL: https://doaj.org/article/ae94857ecc694498bfc1b4255651d632