A Combined Model Based on GM and SARIMA: An Example of Excavator Demand Forecasting

Authors: Zhao, Jing, Wang, Zhaohui, Zhang, Zhongge, Han, Yunpeng

Source: 2019 IEEE 4th International Conference on Cloud Computing and Big Data Analysis (ICCCBDA) Cloud Computing and Big Data Analysis (ICCCBDA), 2019 IEEE 4th International Conference on. :232-236 Apr, 2019

Relation: 2019 IEEE 4th International Conference on Cloud Computing and Big Data Analysis (ICCCBDA)

Author Correction: From coarse to fine: the absolute Escherichia coli proteome under diverse growth conditions.

Authors: Mori, Matteo¹ (AUTHOR), Zhang, Zhongge² (AUTHOR), Banaei-Esfahani, Amir³ (AUTHOR), Lalanne, Jean-Benoît^4,5 (AUTHOR), Okano, Hiroyuki¹ (AUTHOR), Collins, Ben C^3,6 (AUTHOR), Schmidt, Alexander⁷ (AUTHOR), Schubert, Olga T⁸ (AUTHOR), Lee, Deok-Sun⁹ (AUTHOR), Li, Gene-Wei⁴ (AUTHOR), Aebersold, Ruedi^3,10 (AUTHOR) aebersold@imsb.biol.ethz.ch, Hwa, Terence^1,2,11 (AUTHOR) hwa@ucsd.edu, Ludwig, Christina¹² (AUTHOR) tina.ludwig@tum.de

Source: Molecular Systems Biology. Nov2024, Vol. 20 Issue 11, p1257-1259. 3p.

Subject Terms: *MOLECULAR weights, *ESCHERICHIA coli, *INTERNET publishing, *APOLOGIZING, *PROTEINS

Coordination of gene expression with cell size enables Escherichia coli to efficiently maintain motility across conditions

Authors: Honda, Tomoya, Cremer, Jonas, Mancini, Leonardo, Zhang, Zhongge, Pilizota, Teuta, Hwa, Terence

Source: Proceedings of the National Academy of Sciences of the United States of America, 2022 Sep . 119(37), 1-8.

Access URL: https://www.jstor.org/stable/27207007

Comprehensive Characterization of fucAO  Operon Activation in Escherichia coli.

Authors: Zhang, Zhongge¹ (AUTHOR) j1huo@ucsd.edu, Huo, Jialu¹ (AUTHOR), Velo, Juan¹ (AUTHOR), Zhou, Harry¹ (AUTHOR), Flaherty, Alex¹ (AUTHOR), Saier Jr., Milton H.¹ (AUTHOR) zzhongge@ucsd.edu

Source: International Journal of Molecular Sciences. Apr2024, Vol. 25 Issue 7, p3946. 23p.

Subject Terms: *OPERONS, *ESCHERICHIA coli, *RNA polymerases, *BINDING sites, *GENETIC transcription regulation, *FUCOSE

Cellular perception of growth rate and the mechanistic origin of bacterial growth law

Authors: Wu, Chenhao, Balakrishnan, Rohan, Braniff, Nathan, Mori, Matteo, Manzanarez, Gabriel, Zhang, Zhongge, Hwa, Terence

Source: Proceedings of the National Academy of Sciences of the United States of America, 2022 May . 119(20), 1-9.

Access URL: https://www.jstor.org/stable/27151670

Orientation error analysis and compenstation of orthogonal array with two-dimension vector sensors

Authors: Han, Peng, Ren, Chao, Zhang, Zhongge, Steven, Grant L.

Source: 2014 Oceans - St. John's Oceans - St. John's, 2014. :1-7 Sep, 2014

Relation: OCEANS 2014

Histone-like nucleoid structuring (H-NS) protein silences the beta-glucoside (bgl) utilization operon in Escherichia coli by forming a DNA loop

Authors: Lam, Katie Jing Kay, Zhang, Zhongge, Saier, Milton H.

Source: Computational and Structural Biotechnology Journal. 20:6287-6301

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100190062553.0x000001&indx=1&recIds=ETOCvdc_100190062553.0x000001

Predictors of depression among Chinese college students: a machine learning approach.

Authors: Luo, Lin, Yuan, Junfeng, Wu, Chenghan, Wang, Yanling, Zhu, Rui, Xu, Huilin, Zhang, Luqin, Zhang, Zhongge

Source: BMC Public Health; 2/5/2025, Vol. 25 Issue 1, p1-11, 11p

Subject Terms: CENTER for Epidemiologic Studies Depression Scale, DEPRESSION in college students, RANDOM forest algorithms, SLEEP quality, PHYSICAL fitness testing

Investigating How Genomic Contexts Impact IS5 Transposition Within the Escherichia coli Genome.

Authors: Onstead, Jonathan, Zhang, Zhongge, Huo, Jialu, Ord, Jack W., Smith, Sofia, Saier Jr., Milton H.

Source: Microorganisms; Dec2024, Vol. 12 Issue 12, p2600, 21p

Subject Terms: ESCHERICHIA coli, DNA structure, DNA-binding proteins, LOCUS (Genetics), GENOMES, OPERONS

Effects of various substances on the binding of keratin monomers to S. maltophilia DHHJ cells for the induction of keratinase production.

Authors: Xue, Kai, Song, XiaoXiao, Zhang, Wei, Zhang, YunLong, Cao, ZhangJun, Zhang, XingQun, Zhang, ZhongGe

Source: Applied Biochemistry & Biotechnology; Dec2024, Vol. 196 Issue 12, p8645-8656, 12p

Protein-Protein Interactions in the Cytoplasmic Membrane of Escherichia coli: Influence of the Overexpression of Diverse Transporter-Encoding Genes on the Activities of PTS Sugar Uptake Systems

Authors: Aboulwafa, Mohammad, Zhang, Zhongge, Saier Jr., Milton H.

Source: Microbial physiology. 30(1/6):36-49

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100110875930.0x000001&indx=1&recIds=ETOCvdc_100110875930.0x000001

Effects of Global and Specific DNA-Binding Proteins on Transcriptional Regulation of the E. coli bgl Operon.

Authors: Tran, Dennis¹ (AUTHOR), Zhang, Zhongge¹ (AUTHOR) zzhongge@ucsd.edu, Lam, Katie Jing Kay¹ (AUTHOR), Saier Jr., Milton H.¹ (AUTHOR) zzhongge@ucsd.edu

Source: International Journal of Molecular Sciences. Sep2022, Vol. 23 Issue 18, pN.PAG-N.PAG. 18p.

Subject Terms: *ESCHERICHIA coli, *DNA-binding proteins, *OPERONS, *GENETIC transcription regulation, *TRANSCRIPTION factors, *REPORTER genes, *BINDING sites

A Riboflavin Transporter in Bdellovibrio exovorous JSS

Authors: Rodionova, Irina A., Heidari Tajabadi, Fereshteh, Zhang, Zhongge, Rodionov, Dmitry A., Saier Jr., Milton H.

Source: Journal of molecular microbiology and biotechnology. 29(1/6):27-34

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100108589133.0x000001&indx=1&recIds=ETOCvdc_100108589133.0x000001

The phosphocarrier protein HPr of the bacterial phosphotransferase system globally regulates energy metabolism by directly interacting with multiple enzymes in Escherichia coli

Authors: Rodionova, Irina A., Zhang, Zhongge, Mehla, Jitender, Goodacre, Norman, Babu, Mohan, Emili, Andrew, Uetz, Peter, Saier, Milton H., Jr.

Source: In Journal of Biological Chemistry August 2017 292(34):14250-14257

Transposon-mediated activation of the Escherichia coli glpFK operon is inhibited by specific DNA-binding proteins: Implications for stress-induced transposition events

Authors: Zhang, Zhongge, Saier, Milton H., Jr

Source: In Mutation Research - Fundamental and Molecular Mechanisms of Mutagenesis November-December 2016 793-794:22-31

Effect of flow and peristaltic mixing on bacterial growth in a gut-like channel

Authors: Cremer, Jonas, Segota, Igor, Yang, Chih-yu, Arnoldini, Markus, Sauls, John T., Zhang, Zhongge, Gutierrez, Edgar, Groisman, Alex, Hwa, Terence

Source: Proceedings of the National Academy of Sciences of the United States of America, 2016 Oct 01. 113(41), 11414-11419.

Access URL: https://www.jstor.org/stable/26471992

From coarse to fine: the absolute Escherichia coli proteome under diverse growth conditions

Authors: Mori, Matteo, Zhang, Zhongge, Banaei‐Esfahani, Amir, Lalanne, Jean‐Benoît, Okano, Hiroyuki, Collins, Ben C, Schmidt, Alexander, Schubert, Olga T, Lee, Deok‐Sun, Li, Gene‐Wei, Aebersold, Ruedi, Hwa, Terence, Ludwig, Christina

Source: Molecular systems biology. 17(5)

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100122954628.0x000001&indx=1&recIds=ETOCvdc_100122954628.0x000001

Global landscape of cell envelope protein complexes in Escherichia coli

Authors: Babu, Mohan, Bundalovic-Torma, Cedoljub, Calmettes, Charles, Phanse, Sadhna, Zhang, Qingzhou, Jiang, Yue, Minic, Zoran, Kim, Sunyoung, Mehla, Jitender, Gagarinova, Alla, Rodionova, Irina, Kumar, Ashwani, Guo, Hongbo, Kagan, Olga, Pogoutse, Oxana, Aoki, Hiroyuki, Deineko, Viktor, Caufield, J Harry, Holtzapple, Erik, Zhang, Zhongge, Vastermark, Ake, Pandya, Yogee, Lai, Christine Chieh-lin, El Bakkouri, Majida, Hooda, Yogesh, Shah, Megha, Burnside, Dan, Hooshyar, Mohsen, Vlasblom, James, Rajagopala, Sessandra V, Golshani, Ashkan, Wuchty, Stefan, F Greenblatt, Jack, Saier, Milton, Uetz, Peter, F Moraes, Trevor, Parkinson, John, Emili, Andrew

Source: Nature biotechnology. 36(1):103-112

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100132383708.0x000001&indx=1&recIds=ETOCvdc_100132383708.0x000001

The Innate Growth Bistability and Fitness Landscapes of Antibiotic-Resistant Bacteria

Authors: Deris, J. Barrett, Kim, Minsu, Zhang, Zhongge, Okano, Hiroyuki, Hermsen, Rutger, Groisman, Alexander, Hwa, Terence

Source: Science, 2013 Nov . 342(6162), 1068-1068.

Access URL: http://dx.doi.org/10.1126/science.1237435

Genetic Engineering of the Phosphocarrier Protein NPr of the Escherichia coli Phosphotransferase System Selectively Improves Sugar Uptake Activity

Authors: Lopez-de los Santos, Yossef, Chan, Henry, Cantu, Vito A., Rettner, Rachael, Sanchez, Filiberto, Zhang, Zhongge, Saier, Milton H., Jr., Soberon, Xavier

Source: In Journal of Biological Chemistry 24 August 2012 287(35):29931-29939