Learnable Group Transform: Enhancing Genotype-to-Phenotype Prediction for Rice Breeding with Small, Structured Datasets

Authors: Dong, Yunxuan, Chen, Siyuan, Zhang, Jisen

Subject Terms: Quantitative Biology - Genomics

Access URL: http://arxiv.org/abs/2503.11180

Genotype-to-Phenotype Prediction in Rice with High-Dimensional Nonlinear Features

Authors: Zhou, Zeyuan, Chen, Siyuan, Wu, Xinzhang, Zhang, Jisen, Dong, Yunxuan

Subject Terms: Quantitative Biology - Genomics

Access URL: http://arxiv.org/abs/2502.18758

Histone H4K8hib modification promotes gene expression and regulates rice immunity

Authors: Xu, Qiutao ^{1, 6, ∗}, Ma, Xuan ^{2, 6}, Wei, Xuelu ¹, Chen, Zhengting ³, Duan, Yuhang ⁴, Ju, Yuliang ⁵, Wang, Zhaoyun ⁵, Chen, Jing ⁵, Zheng, Lu ⁴, Chen, Xiaolin ⁴, Huang, Junbin ⁴, Zhang, Jisen ¹, Chen, Xiaoyang ^{5, ∗∗}

Source: In Molecular Plant 6 January 2025 18(1):9-13

Enhanced lymphatic transportation of SLN by mimicking oligopeptide transportation route

Authors: Jia, Fuya ^{a, 1}, Fan, Xiaoxing ^{a, 1}, Wu, Licheng ^a, Wang, Yating ^a, Zhang, Jisen ^a, Zhou, Zhou ^a, Li, Lian ^a, Wen, Jingyuan ^b, Huan, Yuan ^{a, ⁎}

Source: In Asian Journal of Pharmaceutical Sciences December 2024

Genome-wide identification of sugarcane SINA family proteins reveals that SsSINA1a positively regulates drought tolerance

Authors: Zhang, Jinxu ^{a, 1}, Xiao, Shenghua ^{a, 1, ⁎}, Zhou, Shaoli ^a, Dong, Xianman ^a, Jiang, Shuo ^a, Bao, Yixue ^a, Jiang, Xialan ^a, Hu, Qin ^a, Duan, Zhenzhen ^a, Powell, Charles A. ^b, Chen, Baoshan ^a, Zhang, Jisen ^{a, ⁎}, Zhang, Muqing ^{a, b, ⁎⁎}, Yao, Wei ^{a, b, ⁎⁎}

Source: In Industrial Crops & Products April 2025 226

The male and female genomes of golden pompano (Trachinotus ovatus) provide insights into the sex chromosome evolution and rapid growth

Authors: Luo, Honglin, Zhang, Yongde, Liu, Fuyan, Zhao, Yongzhen, Peng, Jinxia, Xu, Yuhui, Chen, Xiuli, Huang, Yin, Ji, Changmian, Liu, Qingyun, He, Pingping, Feng, Pengfei, Yang, Chunling, Wei, Pinyuan, Ma, Zhenhua, Qin, Jianguang, Zhou, Shengjie, Dai, Shiming, Zhang, Yaoyao, Zhao, Zhongquan, Liu, Hongling, Zheng, Hongkun, Zhang, Jisen, Lin, Yong, Chen, Xiaohan

Source: In Journal of Advanced Research November 2024 65:1-17

Artificial dermal repair for larger finger pulp defects: Satisfactory coverage with limitations in sensation and inevitable scar formation

Authors: Fang, Jialiu, Zhang, Jisen, Tang, Jin Bo

Source: In Journal of Plastic, Reconstructive & Aesthetic Surgery September 2024 96:161-167

A growth-regulating factor 7 (GRF7)-mediated gene regulatory network promotes leaf growth and expansion in sugarcane

Authors: Wang, Qiaoyu, Li, Yihan, Lin, Dadong, Feng, Xiaoxi, Wang, Yongjun, Wang, Tianyou, Ding, Hongyan, Zhang, Jisen

Source: In The Crop Journal April 2024 12(2):422-431

Cas-mCfLAMP: A multiplex rapid visualization assay for sugarcane pathogens based on labeled LAMP and CRISPR/Cas12a

Authors: Zhu, Lixiang ^a, Di, Ruolin ^a, Huang, Zhen ^a, Lu, Minyan ^a, Yin, Liuyu ^a, Huang, Yuan ^a, Wang, Caixia ^a, Duan, Zhenzhen ^a, Bao, Yixue ^a, Powell, Charles A. ^b, Chen, Baoshan ^a, Zhang, Jisen ^{a, ⁎}, Zhang, Muqing ^{a, b, ⁎}, Yao, Wei ^{a, b, ⁎}

Source: In Microchemical Journal April 2024 199

Transcriptome dynamics provides insights into divergences of the photosynthesis pathway between Saccharum officinarum and Saccharum spontaneum

Authors: Jiang, Qing, Hua, Xiuting, Shi, Huihong, Liu, Jia, Yuan, Yuan, Li, Zhen, Li, Shuangyu, Zhou, Meiqing, Yin, Chongyang, Dou, Meijie, Qi, Nameng, Wang, Yongjun, Zhang, Muqing, Ming, Ray, Tang, Haibao, Zhang, Jisen

Source: Plant journal. 113(6):1278-1294

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100179786574.0x000001&indx=1&recIds=ETOCvdc_100179786574.0x000001

A near-complete genome assembly of the allotetrapolyploid Cenchrus fungigraminus (JUJUNCAO) provides insights into its evolution and C4 photosynthesis

Authors: Zheng, Huakun, Wang, Baiyu, Hua, Xiuting, Gao, Ruiting, Wang, Yuhao, Zhang, Zixin, Zhang, Yixing, Mei, Jing, Huang, Yongji, Huang, Yumin, Lin, Hui, Zhang, Xingtan, Lin, Dongmei, Lan, Siren, Liu, Zhongjian, Lu, Guodong, Wang, Zonghua, Ming, Ray, Zhang, Jisen, Lin, Zhanxi

Source: In Plant Communications 11 September 2023 4(5)

Species-specific regulatory pathways of small RNAs play sophisticated roles in flower development in Dimocarpus longan Lour.

Authors: Liu, Bo, Li, Guanliang, Chen, Chengjie, Zeng, Zaohai, Xu, Jing, Zhang, Jisen, Xia, Rui, Liu, Yuanlong

Source: In Horticultural Plant Journal April 2023 9(2):237-249

Advanced materials for ancient architecture protection: a mini review.

Authors: Huang, Shan¹ (AUTHOR) huangshan@nwpu.edu.cn, Zhang, Jisen¹ (AUTHOR), Zhao, Xingyu² (AUTHOR) 13027080262@163.com

Source: Advanced Composite Materials. Jan2025, p1-23. 23p. 11 Illustrations.

Subject Terms: *Technological innovations, *Information technology, *Noise pollution, Ancient architecture, Ultraviolet radiation, Fireproofing agents

Comparison of Ma-Griffith combined with a minimally invasive small incision to a modified suture technique for the treatment of acute achilles tendon ruptures

Authors: Li Jun, Yu Hao, Zhan Junfeng, Zhang Jisen, Xu Xinzhong, Yao Yunfeng, Tian Dasheng, Xie Jia

Source: BMC Musculoskeletal Disorders, Vol 23, Iss 1, Pp 1-9 (2022)

Subject Terms: Achilles tendon rupture, Minimally invasive surgery, Acute Achilles tendon rupture, Modified MaGriffith method, Modified suture, Diseases of the musculoskeletal system, RC925-935

File Description: electronic resource

Relation: https://doaj.org/toc/1471-2474

Access URL: https://doaj.org/article/5ea0bc5bd2e84a2fa2ba9ab8f003805b

Förster and nanometal surface-energy transfer in CsPbCl3/Yb3+ quantum-cutting multilayer structures

Authors: Liu, Chunxu, Zhang, Jisen, Chen, Yongyi, Wang, Lijie, Song, Yue, Wang, Lijun

Source: Physical chemistry chemical physics. 24(48):29902-29908

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100168302278.0x000001&indx=1&recIds=ETOCvdc_100168302278.0x000001

Global trends and projections in the burden of malignant neoplasm of bone and articular cartilage.

Authors: Fang, Jialiu, Zhang, Xiaoyue, Zhu, Rui, Xing, Xing, Shen, Ziyuan, Zhang, Jisen, Cai, Guoqi

Source: Discover Public Health; 3/19/2025, Vol. 22 Issue 1, p1-13, 13p

Integrated multi-omics analysis unravels the floral scent characteristics and regulation in "Hutou" multi-petal jasmine.

Authors: Fang, Jingping, Zhou, Linwei, Chen, Qinchang, Wang, Jinbin, Zhuang, Ying, Lin, Shaoqing, Yan, Hansong, Zhao, Kai, Zhang, Jisen, Henry, Robert J.

Source: Communications Biology; 2/18/2025, Vol. 8 Issue 1, p1-20, 20p

Subject Terms: ESTERS, JASMINE, LANDSCAPE design, GENE regulatory networks, CHROMOSOME duplication

Divergence in the effects of sugar feedback regulation on the major gene regulatory network and metabolism of photosynthesis in leaves between the two founding Saccharum species.

Authors: Shi, Huihong, Hua, Xiuting, Zhao, Dongxu, Xu, Juanjuan, Li, Min, Wan, Beiyuan, Li, Zhen, Zhang, Yingying, Yao, Jiayu, Li, Shuangyu, Lan, Yuhong, Qi, Yiying, Gao, Ruiting, Zhang, Yixing, Zhang, Kelun, Guo, Yijia, Fan, Xianwei, Tang, Haibao, Zhang, Jisen

Source: Plant Journal; Feb2025, Vol. 121 Issue 4, p1-16, 16p

A dominant role of transcriptional regulation during the evolution of C4 photosynthesis in Flaveria species.

Authors: Lyu, Ming-Ju Amy, Du, Huilong, Yao, Hongyan, Zhang, Zhiguo, Chen, Genyun, Huang, Yuhui, Ni, Xiaoxiang, Chen, Faming, Zhao, Yong-Yao, Tang, Qiming, Miao, Fenfen, Wang, Yanjie, Zhao, Yuhui, Lu, Hongwei, Fang, Lu, Gao, Qiang, Qi, Yiying, Zhang, Qing, Zhang, Jisen, Yang, Tao

Source: Nature Communications; 2/14/2025, Vol. 16, p1-17, 17p

Subject Terms: CARBON 4 photosynthesis, LIFE sciences, GENETIC transcription regulation, GENOME size, CONVERGENT evolution, PHOTOSYNTHESIS

International research initiative on genomics-guided sugarcane breeding.

Authors: Zhang, Xingtan, Wang, Jungang, Noor-ul-Áin, Que, Youxiong, Zhang, Jisen, Abid, Javeria, Zhao, Peifang, Zhang, Yuebin, Lin, Jishan, Chen, Li-yu, Bao, Yixue, Herry, Robert, Tangphatsornruang, Sithichoke, Wang, Qinnan, Huang, Dongliang, Ye, Jian, Zhang, Muqing, Luo, Ming, Butterfield, Mike, Wang, Ren

Source: Molecular Plant (Cell Press); Feb2025, Vol. 18 Issue 2, p171-174, 4p