Integrative proteo-transcriptomic characterization of advanced fibrosis in chronic liver disease across etiologies

Authors: Yang, Hong ^{1, 12}, Atak, Dila ^{2, 12}, Yuan, Meng ¹, Li, Mengzhen ¹, Altay, Ozlem ¹, Demirtas, Elif ³, Peltek, Ibrahim Batuhan ³, Ulukan, Burge ², Yigit, Buket ², Sipahioglu, Tarik ², Álvez, María Bueno ¹, Meng, Lingqi ¹, Yüksel, Bayram ⁴, Turkez, Hasan ⁵, Kirimlioglu, Hale ⁶, Saka, Burcu ⁷, Yurdaydin, Cihan ², Akyildiz, Murat ², Dayangac, Murat ⁹, Uhlen, Mathias ¹, Boren, Jan ⁸, Zhang, Cheng ¹, Mardinoglu, Adil ^{1, 10, ∗}, Zeybel, Mujdat ^{2, 11, 13, ∗∗}

Source: In Cell Reports Medicine 18 February 2025 6(2)

Cellular and immune landscape of chronic liver diseases: insights from immunophenotyping.

Authors: Soleimani, Shaghayegh, Albayrak, Ozgur, Somay, Kayra, Yang, Hong, Yigit, Buket, Ulukan, Burge, Atak, Dila, Akyildiz, Murat, Gursoy, Metehan, Demirtas, Elif, Mardinoglu, Adil, Vural, Atay, Dayangac, Murat, Zeybel, Mujdat

Source: Frontiers in Molecular Biosciences; 2025, p1-10, 10p

The role of PAGE-B score in predicting the development of hepatocelular cancer in patients with chronic delta hepatitis

Authors: Keskin, Onur, Kalkan, Cagdas, Ozturk, Bengi, Caliskan, Aysun, Sahin, Hasan, Gumussoy, Mesut, Yurdcu, Esra, Bozdayi, Mithat, Akyildiz, Murat, Zeybel, Mujdat, Idilman, Ramazan, Yurdaydin, Cihan

Source: Journal of hepatology. 78(S1):S1109-S1110

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100195499822.0x000001&indx=1&recIds=ETOCvdc_100195499822.0x000001

Multiomics Analysis Reveals the Impact of Microbiota on Host Metabolism in Hepatic Steatosis

Authors: Zeybel, Mujdat, Arif, Muhammad, Li, Xiangyu, Altay, Ozlem, Yang, Hong, Shi, Mengnan, Akyildiz, Murat, Saglam, Burcin, Gonenli, Mehmet Gokhan, Yigit, Buket, Ulukan, Burge, Ural, Dilek, Shoaie, Saeed, Turkez, Hasan, Nielsen, Jens, Zhang, Cheng, Uhlén, Mathias, Borén, Jan, Mardinoglu, Adil

Source: Advanced science. 9(11)

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100146859991.0x000001&indx=1&recIds=ETOCvdc_100146859991.0x000001

Ivacaftor and symptoms of extra-oesophageal reflux in patients with cystic fibrosis and G551D mutation

Authors: Zeybel, Gemma L., Pearson, Jeffrey P., Krishnan, Amaran, Bourke, Stephen J., Doe, Simon, Anderson, Alan, Faruqi, Shoaib, Morice, Alyn H., Jones, Rhys, McDonnell, Melissa, Zeybel, Mujdat, Dettmar, Peter W., Brodlie, Malcolm, Ward, Chris

Source: In Journal of Cystic Fibrosis January 2017 16(1):124-131

Combined metabolic activators therapy ameliorates liver fat in nonalcoholic fatty liver disease patients.

Authors: Zeybel, Mujdat^1,2,3 (AUTHOR), Altay, Ozlem⁴ (AUTHOR), Arif, Muhammad⁴ (AUTHOR), Li, Xiangyu⁴ (AUTHOR), Yang, Hong⁴ (AUTHOR), Fredolini, Claudia⁴ (AUTHOR), Akyildiz, Murat³ (AUTHOR), Saglam, Burcin³ (AUTHOR), Gonenli, Mehmet Gokhan³ (AUTHOR), Ural, Dilek⁵ (AUTHOR), Kim, Woonghee⁴ (AUTHOR), Schwenk, Jochen M⁴ (AUTHOR), Zhang, Cheng^4,6 (AUTHOR), Shoaie, Saeed^4,7 (AUTHOR), Nielsen, Jens⁸ (AUTHOR), Uhlén, Mathias⁴ (AUTHOR), Borén, Jan⁹ (AUTHOR) jan.boren@wlab.gu.se, Mardinoglu, Adil^4,7 (AUTHOR) adilm@scilifelab.se

Source: Molecular Systems Biology. Oct2021, Vol. 17 Issue 10, p1-18. 18p.

Subject Terms: *NON-alcoholic fatty liver disease, *FATTY liver, *ASPARTATE aminotransferase, *ALANINE aminotransferase

Chronic hepatitis delta with normal ALT and hepatitis D viremia

Authors: Arici, Sena, Palom, Adriana, Gumussoy, Mesut, Idilman, Ramazan, Gencdal, Genco, Esteban, Rafael, Zeybel, Mujdat, Buti, Maria, Yurdaydin, Cihan

Source: Journal of hepatology. 77(S1):S297-S298

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100167048890.0x000001&indx=1&recIds=ETOCvdc_100167048890.0x000001

Three-dimensional imaging of cleared human liver tissues reveals extensive fibrosis heterogeneity in non-alcoholic fatty liver disease

Authors: Yigit, Buket, Ozgonul, Ekin, Yaman, Omer, Ulukan, Burge, Tas, Yagmur Cetin, Morova, Berna, Aydin, Musa, Uysalli, Yigit, Demirtas, Elif, Erkan, Mert, Ozdemir, Yasemin Gursoy, Karahuseyinoglu, Sercin, Yurdaydin, Cihan, Akyildiz, Murat, Sheth, Abhishek, Kirimlioglu, Hale, Dayangac, Murat, Ferhanoglu, Onur, Kiraz, Alper, Zeybel, Mujdat

Source: Journal of hepatology. 77(S1):S693-S694

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100167004376.0x000001&indx=1&recIds=ETOCvdc_100167004376.0x000001

Upper socioeconomic status is associated with lower Helicobacter pylori infection rate among patients undergoing gastroscopy.

Authors: Attila, Tan^1,2 tanattila2003@yahoo.com, Zeybel, Mujdat¹, Yigit, Yesim Esen³, Baran, Bulent¹, Ahishali, Emel¹, Alper, Emrah¹, Aslan, Fatih¹, Ergonul, Onder⁴, Mungan, Zeynel²

Source: Journal of Infection in Developing Countries. Mar2020, Vol. 14 Issue 3, p298-303. 6p.

Subject Terms: *HELICOBACTER pylori infections, *DUODENAL ulcers, *GASTROSCOPY, *ATROPHIC gastritis, *HELICOBACTER pylori, *AGE distribution

The course of COVID-19 infection in patients with chronic hepatitis B and Delta

Authors: Parlar, Yavuz Emre, Keskin, Onur, Kirmizigul, Beril, Gencdal, Genco, Zeybel, Mujdat, Gumussoy, Mesut, Idilman, Ramazan, Yurdaydin, Cihan

Source: Journal of hepatology. 77(S1):S293-S293

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100167049192.0x000001&indx=1&recIds=ETOCvdc_100167049192.0x000001

TASL Practice Guidance on the Clinical Assessment and Management of Patients with Nonalcoholic Fatty Liver Disease.

Authors: Yilmaz, Yusuf, Zeybel, Mujdat, Adali, Gupse, Cosar, Arif Mansur, Sertesen, Elif, Gokcan, Hale, Bahcecioglu, Halil Ibrahim, Sahin, Mustafa, Tulunay, Cansin, Ergun, Ihsan, Turan, Ilker, Idilman, Ilkay Sedakat, Celikel, Cigdem, Kirimlioglu, Hale, Akyol, Gulen, Yilmaz, Funda, Sokmensuer, Cenk, Guveli, Hakan, Akarca, Ulus Salih, Akyuz, Umit

Source: Hepatology Forum; 2023 Supplement, Vol. 4, p1-32, 32p

Subject Terms: NON-alcoholic fatty liver disease, INSULIN resistance, NONINVASIVE diagnostic tests, FATTY liver, LIVER transplantation, CLINICAL trials, TYPE 2 diabetes, CHRONIC active hepatitis, DECISION making

WED-183 - The role of PAGE-B score in predicting the development of hepatocelular cancer in patients with chronic delta hepatitis

Authors: Keskin, Onur, Kalkan, Cagdas, Ozturk, Bengi, Caliskan, Aysun, Sahin, Hasan, Gumussoy, Mesut, Yurdcu, Esra, Bozdayi, Mithat, Akyildiz, Murat, Zeybel, Mujdat, Idilman, Ramazan, Yurdaydin, Cihan

Source: In Journal of Hepatology June 2023 78 Supplement 1:S1109-S1110

Epidermal growth factor receptor expression in human renal allograft biopsies: an immunohistochemical study

Authors: Sis, Banu, Sarioglu, Sulen ^*, Celik, Ali, Zeybel, Mujdat, Soylu, Alper, Bora, Seymen

Source: In Transplant Immunology 2004 13(3):229-232

SAT058 - Three-dimensional imaging of cleared human liver tissues reveals extensive fibrosis heterogeneity in non-alcoholic fatty liver disease

Authors: Yigit, Buket, Ozgonul, Ekin, Yaman, Omer, Ulukan, Burge, Tas, Yagmur Cetin, Morova, Berna, Aydin, Musa, Uysalli, Yigit, Demirtas, Elif, Erkan, Mert, Ozdemir, Yasemin Gursoy, Karahuseyinoglu, Sercin, Yurdaydin, Cihan, Akyildiz, Murat, Sheth, Abhishek, Kirimlioglu, Hale, Dayangac, Murat, Ferhanoglu, Onur, Kiraz, Alper, Zeybel, Mujdat

Source: In Journal of Hepatology July 2022 77 Supplement 1:S693-S694

THU405 - Chronic hepatitis delta with normal ALT and hepatitis D viremia

Authors: Arici, Sena, Palom, Adriana, Gumussoy, Mesut, Idilman, Ramazan, Gencdal, Genco, Esteban, Rafael, Zeybel, Mujdat, Buti, Maria, Yurdaydin, Cihan

Source: In Journal of Hepatology July 2022 77 Supplement 1:S297-S298

THU397 - The course of COVID-19 infection in patients with chronic hepatitis B and Delta

Authors: Parlar, Yavuz Emre, Keskin, Onur, Kirmizigul, Beril, Gencdal, Genco, Zeybel, Mujdat, Gumussoy, Mesut, Idilman, Ramazan, Yurdaydin, Cihan

Source: In Journal of Hepatology July 2022 77 Supplement 1:S293-S293

Fibrosis

Authors: Zeybel, Mujdat, Mann, Derek A

Source: In Reference Module in Life Sciences 2017

FRI-351-DNA methylation pattern of TM6SF2 influences NAFLD progression in genotype-dependent manner

Authors: Ulukan, Burge, Yigit, Buket, Yilmaz, Onur, Comert, Melis Cansu, Erkan, Mert, Adali, Gupse, Dayangac, Murat, Zeybel, Mujdat

Source: Journal of hepatology. 70(S):e549-e549

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100132573246.0x000001&indx=1&recIds=ETOCvdc_100132573246.0x000001

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Effects of Zearalenone on the metabolic pathways and its relation to the epigenetic mechanisms in HepG2 cells

Authors: Karaman, Ecem Fatma, Senyildiz, Mine, Zeybel, Mujdat, Ozden, Sibel

Source: Toxicology letters. 280(1):S198-S198

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100061451771.0x000001&indx=1&recIds=ETOCvdc_100061451771.0x000001