A multi-omics analysis of effector and resting treg cells in pan-cancer

Authors: Chalepaki, Anna-Maria ^{a, b}, Gkoris, Marios ^{a, b}, Chondrou, Irene ^a, Kourti, Malamati ^a, Georgakopoulos-Soares, Ilias ^c, Zaravinos, Apostolos ^{a, b, ⁎}

Source: In Computers in Biology and Medicine May 2025 189

Regressions of Clustered Gene Expression Data Manifest Tumor-Specific Genes in Urinary Bladder Cancer

Authors: Sarafidis, Michail, Zaravinos, Apostolos, Iliopoulou, Dimitra, Koutsouris, Dimitrios, Lambrou, George I.

Source: 2019 IEEE 19th International Conference on Bioinformatics and Bioengineering (BIBE) Bioinformatics and Bioengineering (BIBE), 2019 IEEE 19th International Conference on. :127-131 Oct, 2019

Relation: 2019 IEEE 19th International Conference on Bioinformatics and Bioengineering (BIBE)

Peptide absent sequences emerging in human cancers

Authors: Tsiatsianis, Georgios Christos, Chan, Candace S.Y., Mouratidis, Ioannis, Chantzi, Nikol, Tsiatsiani, Anna Maria, Yee, Nelson S., Zaravinos, Apostolos, Kantere, Verena, Georgakopoulos-Soares, Ilias

Source: In European Journal of Cancer January 2024 196

Unveiling the Future of Oncology and Precision Medicine through Data Science.

Authors: Zaravinos, Apostolos^1,2 (AUTHOR) a.zaravinos@euc.ac.cy

Source: International Journal of Molecular Sciences. Jun2024, Vol. 25 Issue 11, p5797. 5p.

Subject Terms: *INDIVIDUALIZED medicine, *COMPUTATIONAL biology, *DATA science, *PRECISION farming, *HORMONE receptor positive breast cancer, *BREAST, *CANCER genetics, *ONCOLOGY

Therapeutic Implications of Targeting YY1 in Glioblastoma.

Authors: Navasardyan, Inesa^1,2 (AUTHOR) inesa.navasardyan@western.edu, Zaravinos, Apostolos^3,4 (AUTHOR) a.zaravinos@euc.ac.cy, Bonavida, Benjamin² (AUTHOR) bbonavida@mednet.ucla.edu

Source: Cancers. Jun2024, Vol. 16 Issue 11, p2074. 20p.

Subject Terms: *CHINESE medicine, *COMBINATION drug therapy, *GLIOMAS, *ANTINEOPLASTIC agents, *IMMUNOTHERAPY, *TRANSCRIPTION factors, *TREATMENT effectiveness, *CANCER patients, *GENE expression, *IMMUNE checkpoint inhibitors, *CARCINOGENESIS, *QUALITY assurance, *DNA-binding proteins, *IMMUNE checkpoint proteins, *NANOPARTICLES, *PHARMACODYNAMICS, *CHEMICAL inhibitors

Immune Cytolytic Activity and Strategies for Therapeutic Treatment.

Authors: Agioti, Stephanie¹ (AUTHOR) sa231751@students.euc.ac.cy, Zaravinos, Apostolos^1,2 (AUTHOR) a.zaravinos@euc.ac.cy

Source: International Journal of Molecular Sciences. Apr2024, Vol. 25 Issue 7, p3624. 22p.

Subject Terms: *ANTIGEN presentation, *TUMOR-infiltrating immune cells, *IMMUNE checkpoint proteins, *GENE expression profiling, *TREATMENT effectiveness, *CELL populations

Strand asymmetries across genomic processes

Authors: Moeckel, Camille, Zaravinos, Apostolos, Georgakopoulos-Soares, Ilias

Source: In Computational and Structural Biotechnology Journal 2023 21:2036-2047

Ras suppressor 1 long form (RSU1L) silencing promotes apoptosis in invasive breast cancer cells

Authors: Christou, Christiana, Christodoulou, Maria-Ioanna, Zaravinos, Apostolos, Gkretsi, Vasiliki

Source: In Cellular Signalling January 2023 101

Systems Approaches in the Common Metabolomics in Acute Lymphoblastic Leukemia and Rhabdomyosarcoma Cells: A Computational Approach
4th Genetics, Geriatrics and Neurodegenerative Diseases Research

Authors: Tselios, C., Zaravinos, Apostolos, Tsartsalis, Athanasios N., Tagka, Anna, Kotoulas, Athanasios, Geronikolou, Styliani A., Braoudaki, Maria, Lambrou, George I.

Source: Advances in experimental medicine and biology. 1338:55-66

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCCN607304980&indx=1&recIds=ETOCCN607304980

Characterization of Exhausted T Cell Signatures in Pan-Cancer Settings.

Authors: Juthi, Rifat Tasnim, Sazed, Saiful Arefeen, Mareboina, Manvita, Zaravinos, Apostolos, Georgakopoulos-Soares, Ilias

Source: International Journal of Molecular Sciences; Mar2025, Vol. 26 Issue 5, p2311, 32p

Comprehensive Analysis of Granzymes and Perforin Family Genes in Multiple Cancers.

Authors: Mareboina, Manvita, Bakhl, Katrina, Agioti, Stephanie, Yee, Nelson S., Georgakopoulos-Soares, Ilias, Zaravinos, Apostolos

Source: Biomedicines; Feb2025, Vol. 13 Issue 2, p408, 32p

Subject Terms: CYTOTOXIC T cells, PROGNOSIS, GENE expression, IMMUNE checkpoint inhibitors, GENOMICS

A Multi-Omics Analysis of a Mitophagy-Related Signature in Pan-Cancer.

Authors: Agir, Nora, Georgakopoulos-Soares, Ilias, Zaravinos, Apostolos

Source: International Journal of Molecular Sciences; Jan2025, Vol. 26 Issue 2, p448, 27p

Subject Terms: DRUG resistance in cancer cells, GENE expression, DRUG resistance, CELL physiology, MULTIOMICS

The Role of YY1 in the Regulation of LAG-3 Expression in CD8 T Cells and Immune Evasion in Cancer: Therapeutic Implications.

Authors: Merenstein, Adam, Obeidat, Loiy, Zaravinos, Apostolos, Bonavida, Benjamin

Source: Cancers; Jan2025, Vol. 17 Issue 1, p19, 29p

Subject Terms: DRUG resistance in cancer cells, T cells, CANCER relapse, TRANSCRIPTION factors, IMMUNE checkpoint inhibitors, GENE expression, BIOINFORMATICS, IMMUNOLOGIC receptors, TUMORS, CHEMICAL inhibitors

A computational model for tumor cell membrane tolerance and rigidy limits

Authors: Lambrou, George I., Zaravinos, Apostolos, Adamaki, Maria, Delakas, Dimitrios, Vlahopoulos, Spiros

Source: 2011 10th International Workshop on Biomedical Engineering Biomedical Engineering, 2011 10th International Workshop on. :1-4 Oct, 2011

Relation: 2011 10th International Workshop on Biomedical Engineering

Cross-Talks between RKIP and YY1 through a Multilevel Bioinformatics Pan-Cancer Analysis.

Authors: Baritaki, Stavroula¹ (AUTHOR) baritaks@uoc.gr, Zaravinos, Apostolos^2,3 (AUTHOR) a.zaravinos@euc.ac.cy

Source: Cancers. Oct2023, Vol. 15 Issue 20, p4932. 28p.

Subject Terms: *DISEASE progression, *GENETIC mutation, *IMMUNE checkpoint inhibitors, *ONCOGENES, *APOPTOSIS, *BIOINFORMATICS, *GENE expression, *TUMORS, *DRUG resistance in cancer cells

Defective Natural Killer Cells in Melanoma: Role of NKG2D in Pathogenesis and Immunotherapy

Authors: Touboul, Roni, Zaravinos, Apostolos, Bonavida, Benjamin

Source: Critical reviews in immunology. 41(2):45-76

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCRN631663265&indx=1&recIds=ETOCRN631663265

Single-Cell Analysis in Immuno-Oncology.

Authors: Christodoulou, Maria-Ioanna^1,2 (AUTHOR), Zaravinos, Apostolos^2,3 (AUTHOR) a.zaravinos@euc.ac.cy

Source: International Journal of Molecular Sciences. May2023, Vol. 24 Issue 9, p8422. 19p.

Subject Terms: *T cells, *IMMUNE checkpoint proteins, *TUMOR microenvironment, *RNA sequencing, *MULTIOMICS, *DRUG target, *T cell receptors, *PROGRAMMED cell death 1 receptors

Chapter 12 - Using artificial intelligence to discover new cancer therapies

Authors: Zaravinos, Apostolos

Source: In Therapeutic Applications of Nitric Oxide in Cancer and Inflammatory Disorders 2025:223-251

Genome-Wide Analysis of lncRNA-mRNA Co-Expression Networks in CD133+/CD44+ Stem-like PDAC Cells.

Authors: Eptaminitaki, Giasemi C.¹ (AUTHOR), Zaravinos, Apostolos^2,3 (AUTHOR), Stellas, Dimitris⁴ (AUTHOR), Panagopoulou, Maria^5,6 (AUTHOR), Karaliota, Sevasti¹ (AUTHOR), Baltsavia, Ismini⁷ (AUTHOR), Iliopoulos, Ioannis⁷ (AUTHOR), Chatzaki, Ekaterini^5,6 (AUTHOR), Iliopoulos, Dimitrios⁸ (AUTHOR), Baritaki, Stavroula¹ (AUTHOR) baritaks@uoc.gr

Source: Cancers. Feb2023, Vol. 15 Issue 4, p1053. 24p.

Subject Terms: *RNA analysis, *PANCREATIC tumors, *ADENOCARCINOMA, *IN vitro studies, *IN vivo studies, *METABOLISM, *DUCTAL carcinoma, *BIOINFORMATICS, *STEM cells, *GENOMICS, *MESSENGER RNA, *GENE expression profiling, *GENETIC markers, *RESEARCH funding, *CELL lines, *TUMOR markers, *PHENOTYPES

ILK silencing inhibits migration and invasion of more invasive glioblastoma cells by downregulating ROCK1 and Fascin-1

Authors: Louca, Maria, Zaravinos, Apostolos, Stylianopoulos, Triantafyllos, Gkretsi, Vasiliki

Source: MOLECULAR AND CELLULAR BIOCHEMISTRY. 471(1-2):143-153

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100171433038.0x000001&indx=1&recIds=ETOCvdc_100171433038.0x000001