Consensus representation of multiple cell–cell graphs from gene signaling pathways for cell type annotation

Authors: Yu-An Huang, Yue-Chao Li, Zhu-Hong You, Lun Hu, Peng-Wei Hu, Lei Wang, Yuzhong Peng, Zhi-An Huang

Source: BMC Biology, Vol 23, Iss 1, Pp 1-21 (2025)

Subject Terms: Single-cell RNA sequencing, Cell type annotation, Consensus graph, Cellular communication, Pathway integration, Biology (General), QH301-705.5

File Description: electronic resource

Relation: https://doaj.org/toc/1741-7007

Access URL: https://doaj.org/article/6dcbaecea40a49119d0a387f9e7dae1d

Facilitating integrative and personalized oncology omics analysis with UCSCXenaShiny

Authors: Shensuo Li, Yuzhong Peng, Minjun Chen, Yankun Zhao, Yi Xiong, Jianfeng Li, Peng Luo, Haitao Wang, Fei Zhao, Qi Zhao, Yanru Cui, Sujun Chen, Jian-Guo Zhou, Shixiang Wang

Source: Communications Biology, Vol 7, Iss 1, Pp 1-9 (2024)

Subject Terms: Biology (General), QH301-705.5

File Description: electronic resource

Relation: https://doaj.org/toc/2399-3642

Access URL: https://doaj.org/article/8e4c2b78349f478aa823decbe366adb5

Construction of an ER stress-related prognostic signature for predicting prognosis and screening the effective anti-tumor drug in osteosarcoma

Authors: Weidong Chen, Yan Liao, Pengxiao Sun, Jian Tu, Yutong Zou, Ji Fang, Ziyun Chen, Hongbo Li, Junkai Chen, Yuzhong Peng, Lili Wen, Xianbiao Xie

Source: Journal of Translational Medicine, Vol 22, Iss 1, Pp 1-19 (2024)

Subject Terms: Osteosarcoma, ER stress, Prognostic signature, STC2, Tumor microenvironment, ISOX, Medicine

File Description: electronic resource

Relation: https://doaj.org/toc/1479-5876

Access URL: https://doaj.org/article/f8eaf870c7734aec8eda8bfd1a052a22

MODILM: towards better complex diseases classification using a novel multi-omics data integration learning model

Authors: Yating Zhong, Yuzhong Peng, Yanmei Lin, Dingjia Chen, Hao Zhang, Wen Zheng, Yuanyuan Chen, Changliang Wu

Source: BMC Medical Informatics and Decision Making, Vol 23, Iss 1, Pp 1-18 (2023)

Subject Terms: Complex disease classification, Multi-omics data integration, Graph Attention Networks, Deep learning, Computer applications to medicine. Medical informatics, R858-859.7

File Description: electronic resource

Relation: https://doaj.org/toc/1472-6947

Access URL: https://doaj.org/article/c07a97178f874f368261e391116117fd

P-glycoprotein mediated interactions between Chinese materia medica and pharmaceutical drugs

Authors: Xi Yang, Yuzhong Peng, Yufei He, Xuejun Huang, Aili Xu, Xiaoli Bi, Ying Xie

Source: Digital Chinese Medicine, Vol 4, Iss 4, Pp 251-261 (2021)

Subject Terms: P-glycoprotein (P-gp), Chinese materia medica (CMM), Drug interactions, Pharmacokinetic-pharmacodynamic effects, Inducers, Inhibitors, Medicine, Other systems of medicine, RZ201-999

File Description: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S2589377721000458; https://doaj.org/toc/2589-3777

Access URL: https://doaj.org/article/50cc35ccaa2f45078f3f65c80203b7dc

Enhanced Graph Isomorphism Network for Molecular ADMET Properties Prediction

Authors: Yuzhong Peng, Yanmei Lin, Xiao-Yuan Jing, Hao Zhang, Yiran Huang, Guang Sheng Luo

Source: IEEE Access, Vol 8, Pp 168344-168360 (2020)

Subject Terms: ADMET prediction, graph convolutional network, graph isomorphism network, molecular property, quantitative structure-property relationship, Electrical engineering. Electronics. Nuclear engineering, TK1-9971

File Description: electronic resource

Relation: https://ieeexplore.ieee.org/document/9189862/; https://doaj.org/toc/2169-3536

Access URL: https://doaj.org/article/e69000155e43453baf92672a7162475f

Overview of Intelligent Online Banking System Based on HERCULES Architecture

Authors: Guangsheng Luo, Wenwei Li, Yuzhong Peng

Source: IEEE Access, Vol 8, Pp 107685-107699 (2020)

Subject Terms: HERCULES architecture, machine learning, hot release, smart deposits, white-collar loans, load balancing, Electrical engineering. Electronics. Nuclear engineering, TK1-9971

File Description: electronic resource

Relation: https://ieeexplore.ieee.org/document/9099293/; https://doaj.org/toc/2169-3536

Access URL: https://doaj.org/article/7fa8d0329b9a4081930063f64527bcc1

An Extreme Learning Machine and Gene Expression Programming-Based Hybrid Model for Daily Precipitation Prediction

Authors: Yuzhong Peng, Huasheng Zhao, Hao Zhang, Wenwei Li, Xiao Qin, Jianping Liao, Zhiping Liu, Jie Li

Source: International Journal of Computational Intelligence Systems, Vol 12, Iss 2 (2019)

Subject Terms: Extreme Learning Machine, Gene Expression Programming, Quantitative precipitation prediction, Rainfall prediction, Soft computing, Electronic computers. Computer science, QA75.5-76.95

File Description: electronic resource

Relation: https://www.atlantis-press.com/article/125925031/view; https://doaj.org/toc/1875-6883

Access URL: https://doaj.org/article/0d00e41cdca547b7bde9817345681128

Inferring Causal Direction From Multi-Dimensional Causal Networks for Assessing Harmful Factors in Security Analysis

Authors: Guizhen Mai, Yinghan Hong, Shiguo Peng, Yuzhong Peng

Source: IEEE Access, Vol 5, Pp 20009-20019 (2017)

Subject Terms: Bayesian causal model, causal direction learning, security analysis, split-and-merge, Electrical engineering. Electronics. Nuclear engineering, TK1-9971

File Description: electronic resource

Relation: https://ieeexplore.ieee.org/document/8023750/; https://doaj.org/toc/2169-3536

Access URL: https://doaj.org/article/25b8a33c629b417a91e1b0de9e3f849f

The effects of action observation training on improving upper limb motor functions in people with stroke: A systematic review and meta-analysis.

Authors: Bingbing Zhang, Laidi Kan, Anqin Dong, Jiaqi Zhang, Zhongfei Bai, Yi Xie, Qianhao Liu, Yuzhong Peng

Source: PLoS ONE, Vol 14, Iss 8, p e0221166 (2019)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: https://doaj.org/toc/1932-6203

Access URL: https://doaj.org/article/8d6a9e9ef2574a61a5188cf77df3308e

Reconstructing Phylogeny by Aligning Multiple Metabolic Pathways Using Functional Module Mapping

Authors: Yiran Huang, Cheng Zhong, Hai Xiang Lin, Jianyi Wang, Yuzhong Peng

Source: Molecules, Vol 23, Iss 2, p 486 (2018)

Subject Terms: metabolic pathway alignment, functional module mapping, phylogenetic tree, union graph, Organic chemistry, QD241-441

File Description: electronic resource

Relation: http://www.mdpi.com/1420-3049/23/2/486; https://doaj.org/toc/1420-3049

Access URL: https://doaj.org/article/694737de7c5c4bdcb9a57905d3330e75

Boosting n-octanol/water Partition Coefficients Prediction with An Improved Gene Expression Programming Method.

Authors: Cheng Yuan, Yuzhong Peng, Chuyan Deng, Daoqing Gong, Aiqing Cao

Source: Journal of Physics: Conference Series; 2020, Vol. 1486 Issue 4, p1-1, 1p

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