Correction: Quantitative genetics of CTCF binding reveal local sequence effects and different modes of X-chromosome association.

Authors: Zhihao Ding, Yunyun Ni, Sander W Timmer, Bum-Kyu Lee, Anna Battenhouse, Sandra Louzada, Fengtang Yang, Ian Dunham, Gregory E Crawford, Jason D Lieb, Richard Durbin, Vishwanath R Iyer, Ewan Birney

Source: PLoS Genetics, Vol 11, Iss 4, p e1005177 (2015)

Subject Terms: Genetics, QH426-470

File Description: electronic resource

Relation: http://europepmc.org/articles/PMC4412500?pdf=render; https://doaj.org/toc/1553-7390; https://doaj.org/toc/1553-7404

Access URL: https://doaj.org/article/83e971f382564f24903663e69bd1e39f

Quantitative genetics of CTCF binding reveal local sequence effects and different modes of X-chromosome association.

Authors: Zhihao Ding, Yunyun Ni, Sander W Timmer, Bum-Kyu Lee, Anna Battenhouse, Sandra Louzada, Fengtang Yang, Ian Dunham, Gregory E Crawford, Jason D Lieb, Richard Durbin, Vishwanath R Iyer, Ewan Birney

Source: PLoS Genetics, Vol 10, Iss 11, p e1004798 (2014)

Subject Terms: Genetics, QH426-470

File Description: electronic resource

Relation: http://europepmc.org/articles/PMC4238955?pdf=render; https://doaj.org/toc/1553-7390; https://doaj.org/toc/1553-7404

Access URL: https://doaj.org/article/d650d1d5787144e6b909d9a7af586c3a

Houston Methodist variant viewer: An application to support clinical laboratory interpretation of next-generation sequencing data for cancer

Authors: Paul A Christensen, Yunyun Ni, Feifei Bao, Heather L Hendrickson, Michael Greenwood, Jessica S Thomas, S Wesley Long, Randall J Olsen

Source: Journal of Pathology Informatics, Vol 8, Iss 1, Pp 44-44 (2017)

Subject Terms: Bioinformatics, molecular pathology, next-generation sequencing, pathology informatics, Computer applications to medicine. Medical informatics, R858-859.7, Pathology, RB1-214

File Description: electronic resource

Relation: http://www.jpathinformatics.org/article.asp?issn=2153-3539;year=2017;volume=8;issue=1;spage=44;epage=44;aulast=Christensen; https://doaj.org/toc/2153-3539

Access URL: https://doaj.org/article/5fc5156968a243b9a31f4ab5c71483f5

Simultaneous SNP identification and assessment of allele-specific bias from ChIP-seq data.

Authors: Yunyun Ni¹, Weber Hall, Amelia¹, Battenhouse, Anna¹, Iyer, Vishwanath R.¹ vishy.iyer@gmail.com

Source: BMC Genetics. 2012, Vol. 13 Issue 1, p46-58. 13p. 2 Charts, 6 Graphs.

Subject Terms: *SINGLE nucleotide polymorphisms, *GENOMES, *GENETICS, *GENOMICS, *HAPLOIDY

Seismic Landslide Susceptibility Assessment Using Newmark Displacement Based on a Dual-Channel Convolutional Neural Network

Authors: Yan Li, Dongping Ming, Liang Zhang, Yunyun Niu, Yangyang Chen

Source: Remote Sensing, Vol 16, Iss 3, p 566 (2024)

Subject Terms: landslide, landslide susceptibility assessment, convolutional neural network (CNN), Newmark, earthquake, Science

File Description: electronic resource

Relation: https://www.mdpi.com/2072-4292/16/3/566; https://doaj.org/toc/2072-4292

Access URL: https://doaj.org/article/e59b27e90d734b92984948517361e110

Site-specific Umpolung amidation of carboxylic acids via triplet synergistic catalysis

Authors: Yunyun Ning, Shuaishuai Wang, Muzi Li, Jie Han, Chengjian Zhu, Jin Xie

Source: Nature Communications, Vol 12, Iss 1, Pp 1-9 (2021)

Subject Terms: Science

File Description: electronic resource

Relation: https://doaj.org/toc/2041-1723

Access URL: https://doaj.org/article/d3ce2c10fd0d492db89ee66b2fb0d294

Houston Methodist Variant Viewer: An Application to Support Clinical Laboratory Interpretation of Next-generation Sequencing Data for Cancer.

Authors: Christensen, Paul A., Yunyun Ni, Feifei Bao, Hendrickson, Heather L., Greenwood, Michael, Thomas, Jessica S., Wesley Long, Olsen, Randall J.

Source: Journal of Pathology Informatics; 11/23/2017, Vol. 8, p1-5, 5p, 1 Color Photograph, 2 Diagrams

Subject Terms: CLINICAL medicine, THERAPEUTICS, PATHOLOGICAL laboratories

Longitudinal HER2 amplification tracked in circulating tumor DNA for therapeutic effect monitoring and prognostic evaluation in patients with breast cancer

Authors: Xiuwen Guan, Binliang Liu, Yunyun Niu, Xin Dong, Xia Zhu, Chunxiao Li, Lixi Li, Zongbi Yi, Xiaoying Sun, Hongyan Chen, Sijia Lu, Fei Ma

Source: Breast, Vol 49, Iss , Pp 261-266 (2020)

Subject Terms: Breast cancer, ctDNA, HER2 amplification, HER2 copy numbers, Neoplasms. Tumors. Oncology. Including cancer and carcinogens, RC254-282

File Description: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S0960977619312172; https://doaj.org/toc/1532-3080

Access URL: https://doaj.org/article/ed73735579184da2a63f6eda28adbbf8

A co-modelling method for solving incompatibilities during co-design of mechatronic devices.

Authors: Yunyun Ni¹ y.ni@utwente.nl, Broenink, Jan F.¹ j.f.broenink@utwente.nl

Source: Advanced Engineering Informatics. Aug2014, Vol. 28 Issue 3, p232-240. 9p.

Subject Terms: *PROBLEM solving, *MECHATRONICS, *SYSTEM failures, *FAULT location (Engineering), *COMPUTER software

A Hybrid Tabu Search Algorithm for a Real-World Open Vehicle Routing Problem Involving Fuel Consumption Constraints

Authors: Yunyun Niu, Zehua Yang, Ping Chen, Jianhua Xiao

Source: Complexity, Vol 2018 (2018)

Subject Terms: Electronic computers. Computer science, QA75.5-76.95

File Description: electronic resource

Relation: https://doaj.org/toc/1076-2787; https://doaj.org/toc/1099-0526

Access URL: https://doaj.org/article/bd60b5cc71e14beaaf25267925d0ada5

A Nonlinear Lagrange Algorithm for Stochastic Minimax Problems Based on Sample Average Approximation Method

Authors: Suxiang He, Yunyun Nie, Xiaopeng Wang

Source: Journal of Applied Mathematics, Vol 2014 (2014)

Subject Terms: Mathematics, QA1-939

File Description: electronic resource

Relation: https://doaj.org/toc/1110-757X; https://doaj.org/toc/1687-0042

Access URL: https://doaj.org/article/176ea1c603df47cfa0a233f706831f48

Extensive pyrosequencing reveals frequent intra-genomic variations of internal transcribed spacer regions of nuclear ribosomal DNA.

Authors: Jingyuan Song, Linchun Shi, Dezhu Li, Yongzhen Sun, Yunyun Niu, Zhiduan Chen, Hongmei Luo, Xiaohui Pang, Zhiying Sun, Chang Liu, Aiping Lv, Youping Deng, Zachary Larson-Rabin, Mike Wilkinson, Shilin Chen

Source: PLoS ONE, Vol 7, Iss 8, p e43971 (2012)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/22952830/?tool=EBI; https://doaj.org/toc/1932-6203

Access URL: https://doaj.org/article/bbebc61d492b4d83b8dd256086eda2d2

Cell-type specific and combinatorial usage of diverse transcription factors revealed by genome-wide binding studies in multiple human cells.

Authors: Bum-Kyu Lee¹, Bhinge, Akshay A.¹, Battenhouse, Anna¹, McDaniell, Ryan M.¹, Zheng Liu¹, Lingyun Song², Yunyun Ni¹, Birney, Ewan³, Lieb, Jason D.⁴, Furey, Terrence S.⁵, Crawford, Gregory E., Iyer, Vishwanath R.¹, vishy@mail.utexas.edu

Source: Genome Research; Jan2012, Vol. 22 Issue 1, p15-15, 1p