The HTIRDB: A resource containing a transcriptional atlas for 105 different tissues from each of seven species of domestic herbivore

Authors: Luoyang Ding, Yifan Wang, Linna Zhang, Chengfang Luo, Feifan Wu, Yiming Huang, Yongkang Zhen, Ning Chen, Limin Wang, Li Song, Kelsey Pool, Dominique Blache, Shane K. Maloney, Dongxu Liu, Zhiquan Yang, Xiaoyan Huang, Chuang Li, Xiang Yu, Zhenbin Zhang, Yifei Chen, Chun Xue, Yalan Gu, Weidong Huang, Lu Yan, Wenjun Wei, Yusu Wang, Jinying Zhang, Yifan Zhang, Yiquan Sun, Rui Dai, Shengbo Wang, Xinle Zhao, Haodong Wang, Ping Zhou, Qing‐Yong Yang, Mengzhi Wang

Source: iMeta, Vol 4, Iss 1, Pp n/a-n/a (2025)

Subject Terms: Computer applications to medicine. Medical informatics, R858-859.7

File Description: electronic resource

Relation: https://doaj.org/toc/2770-596X

Access URL: https://doaj.org/article/4101b5ca352941c8bd63a69be1df75e6

Effective microorganism combinations improve the quality of compost-bedded pack products in heifer barns: exploring pack bacteria-fungi interaction mechanisms

Authors: Zhenbin Zhang, Yalan Gu, Shan Wang, Yongkang Zhen, Yifei Chen, Yongkuan Wang, Yongjiang Mao, Jimeng Meng, Zhenyu Duan, Jun Xu, Mengzhi Wang

Source: BMC Microbiology, Vol 24, Iss 1, Pp 1-15 (2024)

Subject Terms: Compost-bedded pack barns, Effective microorganisms, Compost quality, Microbial community, Microbiology, QR1-502

File Description: electronic resource

Relation: https://doaj.org/toc/1471-2180

Access URL: https://doaj.org/article/f40af1005ce64597aba9b167091234d9

De novo transcriptome assembly database for 100 tissues from each of seven species of domestic herbivore

Authors: Yifan Wang, Yiming Huang, Yongkang Zhen, Jiasheng Wang, Limin Wang, Ning Chen, Feifan Wu, Linna Zhang, Yizhao Shen, Congliang Bi, Song Li, Kelsey Pool, Dominique Blache, Shane K. Maloney, Dongxu Liu, Zhiquan Yang, Chuang Li, Xiang Yu, Zhenbin Zhang, Yifei Chen, Chun Xue, Yalan Gu, Weidong Huang, Lu Yan, Wenjun Wei, Yusu Wang, Jinying Zhang, Yifan Zhang, Yiquan Sun, Shengbo Wang, Xinle Zhao, Chengfang Luo, Haodong Wang, Luoyang Ding, Qing-Yong Yang, Ping Zhou, Mengzhi Wang

Source: Scientific Data, Vol 11, Iss 1, Pp 1-7 (2024)

Subject Terms: Science

File Description: electronic resource

Relation: https://doaj.org/toc/2052-4463

Access URL: https://doaj.org/article/b5ecfd088ebf42119a85101216597b3a

Recent insights into the functions and mechanisms of antisense RNA: emerging applications in cancer therapy and precision medicine

Authors: Shahab Ur Rehman, Numan Ullah, Zhenbin Zhang, Yongkang Zhen, Aziz-Ud Din, Hengmi Cui, Mengzhi Wang

Source: Frontiers in Chemistry, Vol 11 (2024)

Subject Terms: AntisenseRNA, epigenetics regulation, cancer therapy, precision medicine, RNA biology, Chemistry, QD1-999

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fchem.2023.1335330/full; https://doaj.org/toc/2296-2646

Access URL: https://doaj.org/article/a303fb564ec54bfc99f42bac59e9378d

Melatonin disturbed rumen microflora structure and metabolic pathways in vitro

Authors: Chun Xue, Yifan Wang, Zhaoyuan He, Zhiqi Lu, Feifan Wu, Yusu Wang, Yongkang Zhen, Jimeng Meng, Khuram Shahzad, Kailun Yang, Mengzhi Wang

Source: Microbiology Spectrum, Vol 11, Iss 6 (2023)

Subject Terms: melatonin, rumen microflora, metabolomics, enzyme activity, Microbiology, QR1-502

File Description: electronic resource

Relation: https://doaj.org/toc/2165-0497

Access URL: https://doaj.org/article/0d5df89fff634ad387cc867643eb92c6

Integrative Meta-Analysis: Unveiling Genetic Factors in Meat Sheep Growth and Muscular Development through QTL and Transcriptome Studies

Authors: Shahab Ur Rehman, Yongkang Zhen, Luoyang Ding, Ahmed A. Saleh, Yifan Zhang, Jinying Zhang, Feiyang He, Hosameldeen Mohamed Husien, Ping Zhou, Mengzhi Wang

Source: Animals, Vol 14, Iss 11, p 1679 (2024)

Subject Terms: meat sheep, growth performance, genetic parameter, integrative meta-analysis, transcriptome analysis, Veterinary medicine, SF600-1100, Zoology, QL1-991

File Description: electronic resource

Relation: https://www.mdpi.com/2076-2615/14/11/1679; https://doaj.org/toc/2076-2615

Access URL: https://doaj.org/article/c2261a65c4c4425ea6eb0b27e3fc1f7a

Multi-Omics Reveals the Impact of Exogenous Short-Chain Fatty Acid Infusion on Rumen Homeostasis: Insights into Crosstalk between the Microbiome and the Epithelium in a Goat Model

Authors: Yongkang Zhen, Zanna Xi, Shaima Mohamed Nasr, Feiyang He, Mengli Han, Junliang Yin, Ling Ge, Yifei Chen, Yusu Wang, Wenjun Wei, Yihui Zhang, Mengzhi Wang

Source: Microbiology Spectrum, Vol 11, Iss 4 (2023)

Subject Terms: metabolism, microbiome, multi-omics, rumen homeostasis, ruminants, short-chain fatty acids, Microbiology, QR1-502

File Description: electronic resource

Relation: https://doaj.org/toc/2165-0497

Access URL: https://doaj.org/article/aadb09edb9ce42ee8665b3b53f9353cf

Effects of Exogenous Oral Infusion of Volatile Fatty Acids on Ileal Microbiome Profiling and Epithelial Health in Goats

Authors: Yongkang Zhen, Chong Zhang, Jiaqi Lin, Ali Rahmat, Feiyang He, Mengzhi Wang

Source: Fermentation, Vol 9, Iss 9, p 801 (2023)

Subject Terms: goats, ileal epithelium, inflammatory cytokines, microbiome, tight junctions, volatile fatty acid, Fermentation industries. Beverages. Alcohol, TP500-660

File Description: electronic resource

Relation: https://www.mdpi.com/2311-5637/9/9/801; https://doaj.org/toc/2311-5637

Access URL: https://doaj.org/article/92ffe36c6c9b4212ae02f5f2f2dda85b

Normal Light-Dark and Short-Light Cycles Regulate Intestinal Inflammation, Circulating Short-chain Fatty Acids and Gut Microbiota in Period2 Gene Knockout Mice

Authors: Yongkang Zhen, Ling Ge, Qiaoyun Xu, Liangyu Hu, Wenjun Wei, Jiantao Huang, Juan J. Loor, Qingyong Yang, Mengzhi Wang, Ping Zhou

Source: Frontiers in Immunology, Vol 13 (2022)

Subject Terms: Per2 knockout, light–dark cycle, short-chain fatty acids, circadian rhythm, inflammation, 16S rRNA sequencing, Immunologic diseases. Allergy, RC581-607

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fimmu.2022.848248/full; https://doaj.org/toc/1664-3224

Access URL: https://doaj.org/article/25152045897a478192b90b5c51a3804b

Biosorption of Copper in Swine Manure Using Aspergillus and Yeast: Characterization and Its Microbial Diversity Study

Authors: Yongkang Zhen, Mengzhi Wang, Yalan Gu, Xiang Yu, Khuram Shahzad, Jun Xu, Yuqing Gong, Peizhen Li, Juan J. Loor

Source: Frontiers in Microbiology, Vol 12 (2021)

Subject Terms: Aspergillus, swine manure, copper, microbial biosorption, 16S and ITS rRNA sequence, Microbiology, QR1-502

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fmicb.2021.687533/full; https://doaj.org/toc/1664-302X

Access URL: https://doaj.org/article/b985a669444e4ca79a834b49e09b6c8a

Advances of Rumen Functional Bacteria and the Application of Micro-Encapsulation Fermentation Technology in Ruminants: A Review

Authors: Wenjun Wei, Yongkang Zhen, Yusu Wang, Khuram Shahzad, Mengzhi Wang

Source: Fermentation, Vol 8, Iss 10, p 564 (2022)

Subject Terms: ruminant, rumen, functional bacteria, micro-encapsulation technology, Fermentation industries. Beverages. Alcohol, TP500-660

File Description: electronic resource

Relation: https://www.mdpi.com/2311-5637/8/10/564; https://doaj.org/toc/2311-5637

Access URL: https://doaj.org/article/77d5b70e6a7642628e3261f274802484

Impacts of Killing Process on the Nutrient Content, Product Stability and In Vitro Digestibility of Black Soldier Fly (Hermetia illucens) Larvae Meals

Authors: Yongkang Zhen, Pipatpong Chundang, Yu Zhang, Mengzhi Wang, Wanwipa Vongsangnak, Chantima Pruksakorn, Attawit Kovitvadhi

Source: Applied Sciences, Vol 10, Iss 17, p 6099 (2020)

Subject Terms: black soldier fly, killing methods, larvae meal, chemical compositions, in vitro digestibility, Technology, Engineering (General). Civil engineering (General), TA1-2040, Biology (General), QH301-705.5, Physics, QC1-999, Chemistry, QD1-999

File Description: electronic resource

Relation: https://www.mdpi.com/2076-3417/10/17/6099; https://doaj.org/toc/2076-3417

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Characteristics, distribution and source of dissolved organic matter and its implications for antimony contamination in Zijiang River basin

Authors: Peikuan FAN, Jianwei ZHOU, Xiaocen JIA, Wanyu LI, Yongkang ZHENG

Source: Shuiwen dizhi gongcheng dizhi, Vol 51, Iss 3, Pp 191-201 (2024)

Subject Terms: zijiang river basin, antimony, dissolved organic matter, excitation-emission matrix spectroscopy, parallel factor analysis, Geology, QE1-996.5

File Description: electronic resource

Relation: https://doaj.org/toc/1000-3665

Access URL: https://doaj.org/article/4ef88335e41d469fae464d2832bb3fbd

Evaluation of Thermodynamic and Chemical Kinetic Models for Hypersonic and High-Temperature Flow Simulation

Authors: Wei Zhao, Xinglian Yang, Jingying Wang, Yongkang Zheng, Yue Zhou

Source: Applied Sciences, Vol 13, Iss 17, p 9991 (2023)

Subject Terms: hypersonic, chemical kinetic model, thermodynamic model, thermochemical nonequilibrium, computational fluid dynamics, Technology, Engineering (General). Civil engineering (General), TA1-2040, Biology (General), QH301-705.5, Physics, QC1-999, Chemistry, QD1-999

File Description: electronic resource

Relation: https://www.mdpi.com/2076-3417/13/17/9991; https://doaj.org/toc/2076-3417

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Robust classification of heart valve sound based on adaptive EMD and feature fusion

Authors: Weibo Wang, Jin Yuan, Bingrong Wang, Yu Fang, Yongkang Zheng, Xingping Hu

Source: PLoS ONE, Vol 17, Iss 12 (2022)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9731417/?tool=EBI; https://doaj.org/toc/1932-6203

Access URL: https://doaj.org/article/2a05c3cc66fe4303b0130605421e36c3

Non-contact heart rate estimation based on singular spectrum component reconstruction using low-rank matrix and autocorrelation.

Authors: Weibo Wang, Zongkai Wei, Jin Yuan, Yu Fang, Yongkang Zheng

Source: PLoS ONE, Vol 17, Iss 12, p e0275544 (2022)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: https://doaj.org/toc/1932-6203

Access URL: https://doaj.org/article/fe563d2e0e9e4f4fb9cfa5ca2c44e594

Robust classification of heart valve sound based on adaptive EMD and feature fusion.

Authors: Weibo Wang, Jin Yuan, Bingrong Wang, Yu Fang, Yongkang Zheng, Xingping Hu

Source: PLoS ONE, Vol 17, Iss 12, p e0276264 (2022)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: https://doaj.org/toc/1932-6203

Access URL: https://doaj.org/article/51536d425a68447e8de408bb368f68f1

Research on Fault Location of Process-Level Communication Networks in Smart Substation Based on Deep Neural Networks

Authors: Bo Ren, Jinsong Li, Yongkang Zheng, Xiaodong Chen, Yibing Zhao, Haiyang Zhang, Chao Zheng

Source: IEEE Access, Vol 8, Pp 109707-109718 (2020)

Subject Terms: Smart substation, communication networks, fault location, deep neural networks, deep learning, Electrical engineering. Electronics. Nuclear engineering, TK1-9971

File Description: electronic resource

Relation: https://ieeexplore.ieee.org/document/9116938/; https://doaj.org/toc/2169-3536

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Revealing the Evolution from Q-Switching to Mode-Locking in an Erbium-Doped Fiber Laser Using Tungsten Trioxide Saturable Absorber

Authors: Xin Tan, Ya Liu, Yongkang Zheng, Zewu Xie, Guoqing Hu

Source: Photonics, Vol 9, Iss 12, p 962 (2022)

Subject Terms: pulsed fiber lasers, Q-switching, mode-locking, tungsten trioxide, Applied optics. Photonics, TA1501-1820

File Description: electronic resource

Relation: https://www.mdpi.com/2304-6732/9/12/962; https://doaj.org/toc/2304-6732

Access URL: https://doaj.org/article/c65a6943152a4fef82d36ca0845be09a