Changes in the potato rhizosphere microbiota richness and diversity occur in a growth stage-dependent manner

Authors: Gye-Ryeong Bak, Kiseok Keith Lee, Ian M. Clark, Tim H. Mauchline, Vanessa Nessner Kavamura, Samnyu Jee, Jeong-Tae Lee, Hyun Kim, Yong-Hwan Lee

Source: Scientific Reports, Vol 15, Iss 1, Pp 1-15 (2025)

Subject Terms: Potato rhizosphere microbiota, Developmental stage, Bacteria, Fungi, Medicine, Science

File Description: electronic resource

Relation: https://doaj.org/toc/2045-2322

Access URL: https://doaj.org/article/4468469f4120495baaecd468db63ffd0

Root microbiome of Panax ginseng in comparison with three other medicinal plants in the families of Araliaceae and Apiaceae

Authors: Zerrin Kozma Kim, Young Sang Park, Tae-Jin Yang, Hyun Kim, Yong-Hwan Lee

Source: Scientific Reports, Vol 14, Iss 1, Pp 1-13 (2024)

Subject Terms: Apiaceae, Araliaceae, Medicinal plants, Panax ginseng Meyer, Root microbiome, Medicine, Science

File Description: electronic resource

Relation: https://doaj.org/toc/2045-2322

Access URL: https://doaj.org/article/d652b7d35a2f41eaa0e668fbbef90edc

Nuclear localization sequence of MoHTR1, a Magnaporthe oryzae effector, for transcriptional reprogramming of immunity genes in rice

Authors: You-Jin Lim, Yoon-Ju Yoon, Hyunjun Lee, Gobong Choi, Seongbeom Kim, Jaeho Ko, Jea Hyeoung Kim, Ki-Tae Kim, Yong-Hwan Lee

Source: Nature Communications, Vol 15, Iss 1, Pp 1-14 (2024)

Subject Terms: Science

File Description: electronic resource

Relation: https://doaj.org/toc/2041-1723

Access URL: https://doaj.org/article/5cfd1b85ee2040658e729eab1e5de68f

Phospho-code of a conserved transcriptional factor underpins fungal virulence

Authors: Jiyun Yang, Bing Li, Yu-Ting Pan, Ping Wang, Mei-Ling Sun, Ki-Tae Kim, Hui Sun, Jian-Ren Ye, Zhen Jiao, Yong-Hwan Lee, Lin Huang

Source: BMC Biology, Vol 22, Iss 1, Pp 1-14 (2024)

Subject Terms: Calcofluor white CFW, Transcription factor CgCrzA, Mitogen-activated protein kinase CgMkk1, Phosphorylation, Cell wall integrity, Pathogenicity, Biology (General), QH301-705.5

File Description: electronic resource

Relation: https://doaj.org/toc/1741-7007

Access URL: https://doaj.org/article/b05bbc8106e94df48098c61922e468a1

Author Correction: Changes in the potato rhizosphere microbiota richness and diversity occur in a growth stage-dependent manner

Authors: Gye-Ryeong Bak, Kiseok Keith Lee, Ian M. Clark, Tim H. Mauchline, Vanessa Nessner Kavamura, Samnyu Jee, Jeong-Tae Lee, Hyun Kim, Yong-Hwan Lee

Source: Scientific Reports, Vol 15, Iss 1, Pp 1-1 (2025)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: https://doaj.org/toc/2045-2322

Access URL: https://doaj.org/article/36c5d35b2dd6489a8a55fd50e5e0b865

A winged-helix DNA-binding protein is essential for self-fertility during sexual development of the homothallic fungus Fusarium graminearum

Authors: Jiyeun Park, Hosung Jeon, Aram Hwangbo, Kyunghun Min, Jaeho Ko, Jung-Eun Kim, Sieun Kim, Ji Young Shin, Yong-Hwan Lee, Yin-Won Lee, Hokyoung Son

Source: mSphere, Vol 9, Iss 9 (2024)

Subject Terms: Fusarium graminearum, sexual reproduction, winged-helix DNA-binding protein, Microbiology, QR1-502

File Description: electronic resource

Relation: https://doaj.org/toc/2379-5042

Access URL: https://doaj.org/article/d8a50c51419a4628b2f976e57e7d36e7

The potato rhizosphere microbiota correlated to the yield of three different regions in Korea

Authors: Gye-Ryeong Bak, Kiseok Keith Lee, Ian M. Clark, Tim H. Mauchline, Vanessa Nessner Kavamura, George Lund, Samnyu Jee, Jeong-Tae Lee, Hyun Kim, Yong-Hwan Lee

Source: Scientific Reports, Vol 14, Iss 1, Pp 1-14 (2024)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: https://doaj.org/toc/2045-2322

Access URL: https://doaj.org/article/b9bc7b65c365455a8cbdc7282481b8a7

Attenuation of phytofungal pathogenicity of Ascomycota by autophagy modulators

Authors: Jongchan Woo, Seungmee Jung, Seongbeom Kim, Yurong Li, Hyunjung Chung, Tatiana V. Roubtsova, Honghong Zhang, Celine Caseys, Dan Kliebenstein, Kyung-Nam Kim, Richard M. Bostock, Yong-Hwan Lee, Martin B. Dickman, Doil Choi, Eunsook Park, Savithramma P. Dinesh-Kumar

Source: Nature Communications, Vol 15, Iss 1, Pp 1-13 (2024)

Subject Terms: Science

File Description: electronic resource

Relation: https://doaj.org/toc/2041-1723

Access URL: https://doaj.org/article/ed1b56027aed44d6a0ed58a9eb7ece3f

The Single-Seed Microbiota Reveals Rare Taxa-Associated Community Robustness

Authors: Hyun Kim, Christopher Kim, Yong-Hwan Lee

Source: Phytobiomes Journal, Vol 7, Iss 3, Pp 324-338 (2023)

Subject Terms: ecological driver, network robustness, plant microbiota, rice, seed, Plant culture, SB1-1110, Microbial ecology, QR100-130, Plant ecology, QK900-989

File Description: electronic resource

Relation: https://doaj.org/toc/2471-2906

Access URL: https://doaj.org/article/f3ff4f3881c74a948502558916d3a32a

Plant domestication shapes rhizosphere microbiome assembly and metabolic functions

Authors: Hong Yue, Wenjie Yue, Shuo Jiao, Hyun Kim, Yong-Hwan Lee, Gehong Wei, Weining Song, Duntao Shu

Source: Microbiome, Vol 11, Iss 1, Pp 1-19 (2023)

Subject Terms: Plant domestication, Root exudation, Rhizosphere microbiomes, Microbial interaction network, Microbial metabolic functions, Wheat, Microbial ecology, QR100-130

File Description: electronic resource

Relation: https://doaj.org/toc/2049-2618

Access URL: https://doaj.org/article/f826c465f89343609255fe60115abd16

Alternative splicing diversifies the transcriptome and proteome of the rice blast fungus during host infection

Authors: Jongbum Jeon, Ki-Tae Kim, Jaeyoung Choi, Kyeongchae Cheong, Jaeho Ko, Gobong Choi, Hyunjun Lee, Gir-Won Lee, Sook-Young Park, Seongbeom Kim, Sun Tae Kim, Cheol Woo Min, Seogchan Kang, Yong-Hwan Lee

Source: RNA Biology, Vol 19, Iss 1, Pp 373-386 (2022)

Subject Terms: alternative splicing, functional diversification, magnaporthe oryzae, pathogenicity, proteome, rice, transcriptome, Genetics, QH426-470

File Description: electronic resource

Relation: https://doaj.org/toc/1547-6286; https://doaj.org/toc/1555-8584

Access URL: https://doaj.org/article/2b3cda9e129c410f9c9cbfffa0a8d416

Longitudinal transmission of bacterial and fungal communities from seed to seed in rice

Authors: Hyun Kim, Jongbum Jeon, Kiseok Kieth Lee, Yong-Hwan Lee

Source: Communications Biology, Vol 5, Iss 1, Pp 1-14 (2022)

Subject Terms: Biology (General), QH301-705.5

File Description: electronic resource

Relation: https://doaj.org/toc/2399-3642

Access URL: https://doaj.org/article/c91c90f80313463ea2096158ae300d17

A comparative genomic analysis of lichen-forming fungi reveals new insights into fungal lifestyles

Authors: Hyeunjeong Song, Ki-Tae Kim, Sook-Young Park, Gir-Won Lee, Jaeyoung Choi, Jongbum Jeon, Kyeongchae Cheong, Gobong Choi, Jae-Seoun Hur, Yong-Hwan Lee

Source: Scientific Reports, Vol 12, Iss 1, Pp 1-14 (2022)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: https://doaj.org/toc/2045-2322

Access URL: https://doaj.org/article/de8b2ac0edc840a1b621a25e52d9e58b

ROS homeostasis mediated by MPK4 and SUMM2 determines synergid cell death

Authors: Ronny Völz, William Harris, Heribert Hirt, Yong-Hwan Lee

Source: Nature Communications, Vol 13, Iss 1, Pp 1-12 (2022)

Subject Terms: Science

File Description: electronic resource

Relation: https://doaj.org/toc/2041-1723

Access URL: https://doaj.org/article/6416d0f7b2414007a87279742ddf6c63

Two‐layer modelling of IEEE 802.11x channel occupancy

Authors: Jae‐Seok Bang, Jin‐Seok Han, Yong‐Hwan Lee

Source: Electronics Letters, Vol 59, Iss 11, Pp n/a-n/a (2023)

Subject Terms: cochannel interference, cognitive radio, internet of things, wireless local area network, wireless sensor networks, Electrical engineering. Electronics. Nuclear engineering, TK1-9971

File Description: electronic resource

Relation: https://doaj.org/toc/0013-5194; https://doaj.org/toc/1350-911X

Access URL: https://doaj.org/article/8d1b761326614f5285a05d47dc88f669

Genome-wide profiling of long non-coding RNA of the rice blast fungus Magnaporthe oryzae during infection

Authors: Gobong Choi, Jongbum Jeon, Hyunjun Lee, Shenxian Zhou, Yong-Hwan Lee

Source: BMC Genomics, Vol 23, Iss 1, Pp 1-12 (2022)

Subject Terms: Host infection, Long non-coding RNA, Magnaporthe oryzae, RNA-seq, Transcriptional regulation, Biotechnology, TP248.13-248.65, Genetics, QH426-470

File Description: electronic resource

Relation: https://doaj.org/toc/1471-2164

Access URL: https://doaj.org/article/6e315190158b4e568fbe37fb3d50aa43

Dysbiotic but nonpathogenic shift in the fecal mycobiota of patients with rheumatoid arthritis

Authors: Eun Ha Lee, Hyun Kim, Jung Hee Koh, Kwang Hyun Cha, Kiseok Keith Lee, Wan-Uk Kim, Cheol-Ho Pan, Yong-Hwan Lee

Source: Gut Microbes, Vol 14, Iss 1 (2022)

Subject Terms: Fecal microbiota, Candida, Aspergillus, dysbiosis, rheumatoid arthritis, Diseases of the digestive system. Gastroenterology, RC799-869

File Description: electronic resource

Relation: https://doaj.org/toc/1949-0976; https://doaj.org/toc/1949-0984

Access URL: https://doaj.org/article/9064ce3b9a2a4589927f602fef74fb8c

Comparative genome analyses of four rice-infecting Rhizoctonia solani isolates reveal extensive enrichment of homogalacturonan modification genes

Authors: Da-Young Lee, Jongbum Jeon, Ki-Tae Kim, Kyeongchae Cheong, Hyeunjeong Song, Gobong Choi, Jaeho Ko, Stephen O. Opiyo, James C. Correll, Shimin Zuo, Sheshu Madhav, Guo-Liang Wang, Yong-Hwan Lee

Source: BMC Genomics, Vol 22, Iss 1, Pp 1-15 (2021)

Subject Terms: Rhizoctonia solani AG1-IA, Rice sheath blight, Plant cell wall degrading enzymes, Homogalacturonan/pectin modification genes, Biotechnology, TP248.13-248.65, Genetics, QH426-470

File Description: electronic resource

Relation: https://doaj.org/toc/1471-2164

Access URL: https://doaj.org/article/da0aaa3c50c342129316be77089804a8

The Membrane-Bound Protein, MoAfo1, Is Involved in Sensing Diverse Signals from Different Surfaces in the Rice Blast Fungus

Authors: Md Abu Sadat, Joon-Hee Han, Seongbeom Kim, Yong-Hwan Lee, Kyoung Su Kim, Jaehyuk Choi

Source: The Plant Pathology Journal, Vol 37, Iss 2, Pp 87-98 (2021)

Subject Terms: appressorium formation, host signal sensing, reactive oxygen species, Plant culture, SB1-1110

File Description: electronic resource

Relation: http://www.ppjonline.org/upload/pdf/PPJ-OA-08-2020-0154.pdf; https://doaj.org/toc/1598-2254; https://doaj.org/toc/2093-9280

Access URL: https://doaj.org/article/fe9e34ff016f4e589c8e1e22ce49c57d

Comparative profiling of canonical and non-canonical small RNAs in the rice blast fungus, Magnaporthe oryzae

Authors: Hyunjun Lee, Gobong Choi, You-Jin Lim, Yong-Hwan Lee

Source: Frontiers in Microbiology, Vol 13 (2022)

Subject Terms: sRNA, Dicer, ERI-1, Magnaporthe oryzae, canonical RNAi, non-canonical RNAi, Microbiology, QR1-502

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fmicb.2022.995334/full; https://doaj.org/toc/1664-302X

Access URL: https://doaj.org/article/1cf1ad380c0f436dbd39b4039a1c4322