Genome-wide characterization of dynamic DNA 5-hydroxymethylcytosine and TET2-related DNA demethylation during breast tumorigenesis

Authors: Shuang-Ling Wu, Lin Yang, Changcai Huang, Qing Li, Chunhui Ma, Fang Yuan, Yinglin Zhou, Xiaoyue Wang, Wei-Min Tong, Yamei Niu, Feng Jin

Source: Clinical Epigenetics, Vol 16, Iss 1, Pp 1-21 (2024)

Subject Terms: Breast tumorigenesis, DNA 5-hydroxymethylcytosine, 5-methylcytosine, DNA methylation, DNA demethylation, TET2, Medicine, Genetics, QH426-470

File Description: electronic resource

Relation: https://doaj.org/toc/1868-7083

Access URL: https://doaj.org/article/41144b1c9892407d8819b88828740caf

DBC1 maintains skeletal muscle integrity by enhancing myogenesis and preventing myofibre wasting

Authors: Na Liang, Jia He, Jiaqi Yan, Xueying Han, Xiaoqian Zhang, Yamei Niu, Wuga Sha, Jun Li

Source: Journal of Cachexia, Sarcopenia and Muscle, Vol 15, Iss 1, Pp 255-269 (2024)

Subject Terms: DBC1, FOXO3, myogenesis, skeletal muscle atrophy, Diseases of the musculoskeletal system, RC925-935, Human anatomy, QM1-695

File Description: electronic resource

Relation: https://doaj.org/toc/2190-5991; https://doaj.org/toc/2190-6009

Access URL: https://doaj.org/article/3d63f85cfc6f4db9963714ce84a7a8b6

ALKBH5 in mouse testicular Sertoli cells regulates Cdh2 mRNA translation to maintain blood–testis barrier integrity

Authors: Zhonglin Cai, Yao Zhang, Lin Yang, Chunhui Ma, Yi Fei, Jing Ding, Wei Song, Wei-Min Tong, Yamei Niu, Hongjun Li

Source: Cellular & Molecular Biology Letters, Vol 27, Iss 1, Pp 1-16 (2022)

Subject Terms: RNA N 6-methyladenosine, Alkbh5, Blood–testis barrier, Cdh2, Basal endoplasmic specialization, Cytology, QH573-671

File Description: electronic resource

Relation: https://doaj.org/toc/1425-8153; https://doaj.org/toc/1689-1392

Access URL: https://doaj.org/article/d9c2532bd20145e895781a5b5b570caa

m6A demethylase ALKBH5 is required for antibacterial innate defense by intrinsic motivation of neutrophil migration

Authors: Yang Liu, Renjie Song, Lu Zhao, Zhike Lu, Yini Li, Xinyi Zhan, Fengjiao Lu, Jiang Yang, Yamei Niu, Xuetao Cao

Source: Signal Transduction and Targeted Therapy, Vol 7, Iss 1, Pp 1-15 (2022)

Subject Terms: Medicine, Biology (General), QH301-705.5

File Description: electronic resource

Relation: https://doaj.org/toc/2059-3635

Access URL: https://doaj.org/article/bf2fb281bd7c4c6084b70755bf471c8b

Rare and misincorporated DNA N6-methyladenine is a hallmark of cytotoxic stresses for selectively stimulating the stemness and proliferation of glioblastoma cells

Authors: Cong Lyu, Yamei Niu, Weiyi Lai, Yu Wang, Yaning Wang, Peibin Dai, Chunhui Ma, Shaokun Chen, Yao Li, Guibin Jiang, Zhiyong Liang, Wenbin Ma, Zhengliang Gao, Wei-Min Tong, Hailin Wang

Source: Cell Discovery, Vol 8, Iss 1, Pp 1-15 (2022)

Subject Terms: Cytology, QH573-671

File Description: electronic resource

Relation: https://doaj.org/toc/2056-5968

Access URL: https://doaj.org/article/9dfac327a6ab418eabca4d82c3b2024f

Correction: ALKBH5 in mouse testicular Sertoli cells regulates Cdh2 mRNA translation to maintain blood–testis barrier integrity

Authors: Zhonglin Cai, Yao Zhang, Lin Yang, Chunhui Ma, Yi Fei, Jing Ding, Wei Song, Wei-Min Tong, Yamei Niu, Hongjun Li

Source: Cellular & Molecular Biology Letters, Vol 29, Iss 1, Pp 1-1 (2024)

Subject Terms: Cytology, QH573-671

File Description: electronic resource

Relation: https://doaj.org/toc/1689-1392

Access URL: https://doaj.org/article/2173ee78c0ab434287667fe7515a8ffa

RNA m6A Demethylase ALKBH5 Protects Against Pancreatic Ductal Adenocarcinoma via Targeting Regulators of Iron Metabolism

Authors: Rui Huang, Lin Yang, Zhiwen Zhang, Xiaoding Liu, Yi Fei, Wei-Min Tong, Yamei Niu, Zhiyong Liang

Source: Frontiers in Cell and Developmental Biology, Vol 9 (2021)

Subject Terms: pancreatic ductal adenocarcinoma (PDAC), ALKBH5, RNA m6A methylation, iron metabolism, FBXL5, Biology (General), QH301-705.5

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fcell.2021.724282/full; https://doaj.org/toc/2296-634X

Access URL: https://doaj.org/article/4f35722ddc844194b0188c138991f767

Loss of 5-Hydroxymethylcytosine as an Epigenetic Signature That Correlates With Poor Outcomes in Patients With Medulloblastoma

Authors: Fu Zhao, Zhi-Wei Zhang, Jing Zhang, Shun Zhang, Heng Zhang, Chi Zhao, Yang Chen, Lin Luo, Wei-Min Tong, Chunde Li, Yamei Niu, Pinan Liu

Source: Frontiers in Oncology, Vol 11 (2021)

Subject Terms: medulloblastoma, 5-hydroxymethylcytosine, prognosis, Ki-67, epigenetics, immunohistochemistry, Neoplasms. Tumors. Oncology. Including cancer and carcinogens, RC254-282

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fonc.2021.603686/full; https://doaj.org/toc/2234-943X

Access URL: https://doaj.org/article/3ab63861e46c497d8a38ae88a41099a8

RNA m6A Methylation Regulators Subclassify Luminal Subtype in Breast Cancer

Authors: Lin Yang, Shuangling Wu, Chunhui Ma, Shuhui Song, Feng Jin, Yamei Niu, Wei-Min Tong

Source: Frontiers in Oncology, Vol 10 (2021)

Subject Terms: RNA methylation, m6A regulators, genomic regulation, breast cancer subtypes, subclassification, survival, Neoplasms. Tumors. Oncology. Including cancer and carcinogens, RC254-282

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fonc.2020.611191/full; https://doaj.org/toc/2234-943X

Access URL: https://doaj.org/article/7dd015be2d424436a6d8bc5c8810074d

Changes in DNA 5-Hydroxymethylcytosine Levels and the Underlying Mechanism in Non-functioning Pituitary Adenomas

Authors: Yiwen Xu, Yamei Niu, Kan Deng, Hui Pan, Feng Feng, Fengying Gong, Wei-Min Tong, Shi Chen, Lin Lu, Renzhi Wang, Hui You, Yong Yao, Huijuan Zhu

Source: Frontiers in Endocrinology, Vol 11 (2020)

Subject Terms: 5hmC, NFPAs, TET2, ultrahigh performance liquid chromatography-electrospray ionization-tandem mass spectrometry (UPLC-ESI-MS/MS), DNA demethylation, Diseases of the endocrine glands. Clinical endocrinology, RC648-665

File Description: electronic resource

Relation: https://www.frontiersin.org/article/10.3389/fendo.2020.00361/full; https://doaj.org/toc/1664-2392

Access URL: https://doaj.org/article/7fad67746b0842feaca2b626d0592ec4

RNA m6A methylation participates in regulation of postnatal development of the mouse cerebellum

Authors: Chunhui Ma, Mengqi Chang, Hongyi Lv, Zhi-Wei Zhang, Weilong Zhang, Xue He, Gaolang Wu, Shunli Zhao, Yao Zhang, Di Wang, Xufei Teng, Chunying Liu, Qing Li, Arne Klungland, Yamei Niu, Shuhui Song, Wei-Min Tong

Source: Genome Biology, Vol 19, Iss 1, Pp 1-18 (2018)

Subject Terms: N6-methyladenosine, RNA methylation, ALKBH5, METTL3, Cerebellar development, Biology (General), QH301-705.5, Genetics, QH426-470

File Description: electronic resource

Relation: http://link.springer.com/article/10.1186/s13059-018-1435-z; https://doaj.org/toc/1474-760X

Access URL: https://doaj.org/article/beadf29692594d6c96ef7d2d1cbdb7ba

Region-specific RNA m6A methylation represents a new layer of control in the gene regulatory network in the mouse brain

Authors: Mengqi Chang, Hongyi Lv, Weilong Zhang, Chunhui Ma, Xue He, Shunli Zhao, Zhi-Wei Zhang, Yi-Xin Zeng, Shuhui Song, Yamei Niu, Wei-Min Tong

Source: Open Biology, Vol 7, Iss 9 (2017)

Subject Terms: n6-methyladenosine, rna methylation, mouse cerebellum, mouse cerebral cortex, epitranscriptomic mark, Biology (General), QH301-705.5

File Description: electronic resource

Relation: https://doaj.org/toc/2046-2441

Access URL: https://doaj.org/article/29326f8e71fb4c81af111e0c3e0019d0

The Machado-Joseph Disease Deubiquitinase Ataxin-3 Regulates the Stability and Apoptotic Function of p53.

Authors: Hongmei Liu, Xiaoling Li, Guozhu Ning, Shu Zhu, Xiaolu Ma, Xiuli Liu, Chunying Liu, Min Huang, Ina Schmitt, Ullrich Wüllner, Yamei Niu, Caixia Guo, Qiang Wang, Tie-Shan Tang

Source: PLoS Biology, Vol 14, Iss 11, p e2000733 (2016)

Subject Terms: Biology (General), QH301-705.5

File Description: electronic resource

Relation: https://doaj.org/toc/1544-9173; https://doaj.org/toc/1545-7885

Access URL: https://doaj.org/article/f9e8562c306749e8ab780980fc4379a2

m ⁶ A demethylase ALKBH5 is required for antibacterial innate defense by intrinsic motivation of neutrophil migration.

Authors: Yang Liu, Renjie Song, Lu Zhao, Zhike Lu, Yini Li, Xinyi Zhan, Fengjiao Lu, Jiang Yang, Yamei Niu, Xuetao Cao

Source: Signal Transduction & Targeted Therapy; 6/29/2022, Vol. 7 Issue 1, p1-15, 15p, 6 Charts

METTL3-mediated RNA m⁶A Hypermethylation Promotes Tumorigenesis and GH Secretion of Pituitary Somatotroph Adenomas.

Authors: Mengqi Chang, Zihao Wang, Jun Gao, Chengxian Yang, Ming Feng, Yamei Niu, Wei-Min Tong, Xinjie Bao, Renzhi Wang

Source: Journal of Clinical Endocrinology & Metabolism; Jan2022, Vol. 107 Issue 1, p136-149, 14p

Subject Terms: PITUITARY tumors, GENE expression, PROTEIN expression, SMALL interfering RNA, RNA interference, ADENOMATOUS polyps

Sprouts of RNA epigenetics The discovery of mammalian RNA demethylases.

Authors: Guanqun Zheng, Dahl, John Arne, Yamei Niu, Ye Fu, Klungland, Arne, Yang, Yun-Gui, Chuan He

Source: RNA Biology; Jun2013, Vol. 10 Issue 6, p1-4, 4p

A Nuclear Export Signal and Phosphorylation Regulate Dok1 Subcellular Localization and Functions.

Authors: Yamei Niu¹, Roy, François¹, Saltel, Frédéric^2,3, Andrieu-Soler, Charlotte^1,4, Wen Dong¹, Chantegrel, Anne-Lise¹, Accardi, Rosita¹, Thépot, Amélie¹, Foiselle, Nadège¹, Tommasino, Massimo¹, Jurdic, Pierre², Sylla, Bakary S.¹

Source: Molecular & Cellular Biology. Jul2006, Vol. 26 Issue 13, p23-23. 1p.

Subject Terms: *PROTEINS, *CYTOPLASM, *CELLS, *NUCLEAR nonproliferation, *SERUM, *PHOSPHORYLATION