Dynamic ctDNA tracking stratifies relapse risk for triple negative breast cancer patients receiving neoadjuvant chemotherapy

Authors: Shunying Li, Yudong Li, Wei Wei, Chang Gong, Ting Wang, Guangxin Li, Feng Yao, Jiang-Hua Ou, Yan Xu, Wei Wu, Liang Jin, Nanyan Rao, Yan Nie, Fengyan Yu, Weijuan Jia, Xing-Rui Li, Jun Zhang, Hua-Wei Yang, Yaping Yang, Mengzi Wu, Qin Li, Fang Li, Yuhua Gong, Xin Yi, Qiang Liu

Source: Nature Communications, Vol 16, Iss 1, Pp 1-13 (2025)

Subject Terms: Science

File Description: electronic resource

Relation: https://doaj.org/toc/2041-1723

Access URL: https://doaj.org/article/9f24912e0d7a408e9cd836797f3c3a15

97 Machine learning algorithms in the prognosis of cutaneous melanoma: a population-based study

Authors: Tongtong Jin, Donggang Yao, Yan Xu, Xiaopeng Zhang, Xu Dong, Haiya Bai

Source: Discover Oncology, Vol 16, Iss 1, Pp 1-10 (2025)

Subject Terms: Machine learning, Cutaneous melanoma, Skin cancer, Prognosis, SEER, Neoplasms. Tumors. Oncology. Including cancer and carcinogens, RC254-282

File Description: electronic resource

Relation: https://doaj.org/toc/2730-6011

Access URL: https://doaj.org/article/f2cdba1ab28b48ed881724dfe88f2611

Therapeutic targeting de novo purine biosynthesis driven by β-catenin-dependent PPAT upregulation in hepatoblastoma

Authors: Ming Ding, Chunshuang Ma, Yanyan Lin, Houshun Fang, Yan Xu, Shuxuan Wang, Yao Chen, Jiquan Zhou, Hongxiang Gao, Yuhua Shan, Liyuan Yang, Huiying Sun, Yabin Tang, Xiaoyu Wu, Liang Zhu, Liang Zheng, Yehuda G. Assaraf, Bin-Bing S. Zhou, Song Gu, Hui Li

Source: Cell Death and Disease, Vol 16, Iss 1, Pp 1-14 (2025)

Subject Terms: Cytology, QH573-671

File Description: electronic resource

Relation: https://doaj.org/toc/2041-4889

Access URL: https://doaj.org/article/efb40728d3a44722b20fc4d0da43e1e2

Association between volume of processed plasma and total bilirubin reduction during plasma adsorption for severe liver disease

Authors: Yuanji Ma, Yan Xu, Lingyao Du, Lang Bai, Hong Tang

Source: European Journal of Medical Research, Vol 30, Iss 1, Pp 1-10 (2025)

Subject Terms: Severe liver disease, Artificial liver support system, Double plasma molecular adsorption system, Volume of processed plasma, Therapeutic dosing, Medicine

File Description: electronic resource

Relation: https://doaj.org/toc/2047-783X

Access URL: https://doaj.org/article/a4c5a1224184415094ced05583a2af75

Targeted long-read sequencing facilitates effective carrier screening for complex monogenic diseases including spinal muscular atrophy, α-/β-thalassemia, 21-hydroxylase deficiency, and fragile-X syndrome

Authors: Shuyuan Li, Renyi Hua, Xu Han, Yan Xu, Ming Li, Li Gao, Ruiyu Ma, Wanli Meng, Aiping Mao, Jian Wang, Yanlin Wang

Source: Journal of Translational Medicine, Vol 23, Iss 1, Pp 1-12 (2025)

Subject Terms: Carrier screening, Thalassemia, SMA, 21-OHD, FXS, Long-read sequencing, Medicine

File Description: electronic resource

Relation: https://doaj.org/toc/1479-5876

Access URL: https://doaj.org/article/a4df4b50ec6d4c499a5ebbb0961dfcc8

Thalidomide-based regimen shows promising efficacy in large granular lymphocytic leukemia: a multicenter phase II study

Authors: Ying Yu, Yuxi Li, Rui Cui, Yuting Yan, Fei Li, Yan Chen, Tingyu Wang, Xiaoli Hu, Yaqing Feng, Tengteng Yu, Yanshan Huang, Jingwen Sun, Rui Lyu, Wenjie Xiong, Qi Wang, Wei Liu, Gang An, Weiwei Sui, Yan Xu, Wenyang Huang, Dehui Zou, Huijun Wang, Zhijian Xiao, Jianxiang Wang, Lugui Qiu, Shuhua Yi

Source: Signal Transduction and Targeted Therapy, Vol 10, Iss 1, Pp 1-8 (2025)

Subject Terms: Medicine, Biology (General), QH301-705.5

File Description: electronic resource

Relation: https://doaj.org/toc/2059-3635

Access URL: https://doaj.org/article/1ab5b77a9d1545fd8c082259ec530ec1

Unraveling the multiple interactions between phages, microbes and flavor in the fermentation of strong-flavor Baijiu

Authors: Huadong Zhang, Hongxia Zhang, Hai Du, Yan Zhang, Menghui Zhang, Xiaowei Yu, Yan Xu

Source: Bioresources and Bioprocessing, Vol 12, Iss 1, Pp 1-19 (2025)

Subject Terms: Baijiu, Virus, Bacteria, Fungal, Viral metagenomics, Fermented foods, Technology, Chemical technology, TP1-1185, Biotechnology, TP248.13-248.65

File Description: electronic resource

Relation: https://doaj.org/toc/2197-4365

Access URL: https://doaj.org/article/bb3ebc26c33c40bb9b839143e91f7e5f

Sleep traits causally affect epigenetic age acceleration: a Mendelian randomization study

Authors: Wen Zhao, Shiyao Yu, Yan Xu, Huijuan Liao, Daiyi Chen, Ting Lu, Zhixuan Ren, Lijuan Ge, Jianhui Liu, Jingbo Sun

Source: Scientific Reports, Vol 15, Iss 1, Pp 1-11 (2025)

Subject Terms: Sleep disorders, Aging, Epigenetic age acceleration, Mendelian randomization, Medicine, Science

File Description: electronic resource

Relation: https://doaj.org/toc/2045-2322

Access URL: https://doaj.org/article/f1ba4e267d89437093d08ee9e39f31d4

Climate change affects the suitability of Chinese cherry (Prunus pseudocerasus Lindl.) in China

Authors: Zhengxin Lv, Songtao Jiu, Li Wang, Yan Xu, Jiyuan Wang, Xunju Liu, Jieming Xu, Yuxuan Wang, Muhammad Salman Haider, Ruie Liu, Caixi Zhang

Source: Molecular Horticulture, Vol 5, Iss 1, Pp 1-19 (2025)

Subject Terms: Climate change, P. pseudocerasus, Biomod2, Suitability, Climate dependence, Ecological niche, Plant culture, SB1-1110, Botany, QK1-989

File Description: electronic resource

Relation: https://doaj.org/toc/2730-9401

Access URL: https://doaj.org/article/bcc057aebcd744038d1342ec763b9ba0

Exploring the factors influencing the timely intravitreal anti-VEGF treatment in patients with diabetic macular edema: a qualitative interview study using the COM-B model

Authors: Shu Li, Jiani Pan, Yan Xu, Zhengyue Dai, Qiong Fang

Source: BMC Health Services Research, Vol 25, Iss 1, Pp 1-9 (2025)

Subject Terms: Diabetic Macular Edema, Intravitreal anti-VEGF treatment, Timely injection, Public aspects of medicine, RA1-1270

File Description: electronic resource

Relation: https://doaj.org/toc/1472-6963

Access URL: https://doaj.org/article/2fb5e18f8c634bed950952180166ab5b

CDKN2A, a key gene in copper-induced cell death model, influencing melanoma invasion and apoptosis

Authors: Jing Li, Xi Yang, Cunli Yin, Siru Li, Yan Xu, Bin Liu

Source: Discover Oncology, Vol 16, Iss 1, Pp 1-22 (2025)

Subject Terms: Cuproptosis, Cell death, SKCM, Cancer, Neoplasms. Tumors. Oncology. Including cancer and carcinogens, RC254-282

File Description: electronic resource

Relation: https://doaj.org/toc/2730-6011

Access URL: https://doaj.org/article/1cb0aed2239b4921a0bf41f700c8c168

Fucoxanthin Ameliorates Kidney Injury by CCl4‑Induced via Inhibiting Oxidative Stress, Suppressing Ferroptosis, and Modulating Gut Microbiota

Authors: Yaping Ding, Jiena Ye, Ying Liu, Shaohua Zhang, Yan Xu, Zuisu Yang, Zhongliang Liu

Source: ACS Omega, Vol 10, Iss 7, Pp 7407-7421 (2025)

Subject Terms: Chemistry, QD1-999

File Description: electronic resource

Relation: https://doaj.org/toc/2470-1343

Access URL: https://doaj.org/article/837b512b4c1445f5bf2a8529bf684a9d

Association of 25-hydroxyvitamin D with Parkinson’s disease based on the results from the NHANES 2007 to 2018 and Mendelian randomization analysis

Authors: Yan Xu, Jie Peng, Xiguo Zhou, Yuexin Huang, Guanzhen Zhong, Zhiwei Xia

Source: Scientific Reports, Vol 15, Iss 1, Pp 1-12 (2025)

Subject Terms: Parkinson’s disease, 25-hydroxyvitamin D, Vitamin D, NHANES, Mendelian randomization, Medicine, Science

File Description: electronic resource

Relation: https://doaj.org/toc/2045-2322

Access URL: https://doaj.org/article/3c707569468547a799ad6b27ea32fea8

Tongue coating microbial communities vary in children with Henoch-Schönlein purpura

Authors: Shuang Pang, Qinghao Yan, Qunfeng Lu, Wenjian Chen, Yan Dai, Liping Yue, Yan Xu, Min Li

Source: Scientific Reports, Vol 15, Iss 1, Pp 1-13 (2025)

Subject Terms: Henoch-Schönlein purpura, Microbiota, Tongue coating, Children, 16S rRNA, Medicine, Science

File Description: electronic resource

Relation: https://doaj.org/toc/2045-2322

Access URL: https://doaj.org/article/a473633ec092490cac63317651cfb726

Chromosome-level genomes of two Bracteacoccaceae highlight adaptations to biocrusts

Authors: Hongping Liang, Yan Xu, Sunil Kumar Sahu, Hongli Wang, Linzhou Li, Xiayi Chen, Yuying Zeng, Maike Lorenz, Thomas Friedl, Barbara Melkonian, Gane Ka-Shu Wong, Michael Melkonian, Huan Liu, Sibo Wang

Source: Nature Communications, Vol 16, Iss 1, Pp 1-18 (2025)

Subject Terms: Science

File Description: electronic resource

Relation: https://doaj.org/toc/2041-1723

Access URL: https://doaj.org/article/91900d20400f4ec283c4b31b7e566307

Inhibition of RAC1 activator DOCK2 ameliorates cholestatic liver injury via regulating macrophage polarisation and hepatic stellate cell activation

Authors: Jianli Qiu, Yitong Qu, Yinli Li, Cancan Li, Junling Wang, Lu Meng, Xiaojin Jing, Jiangping Fu, Yan Xu, Yuna Chai

Source: Biology Direct, Vol 20, Iss 1, Pp 1-16 (2025)

Subject Terms: DOCK2, RAC1, Cholestasis, Liver fibrosis, Hepatic stellate cell, Macrophage polarisation, Biology (General), QH301-705.5

File Description: electronic resource

Relation: https://doaj.org/toc/1745-6150

Access URL: https://doaj.org/article/01c2ae99d7f64abc9993226eaf9fe520

Ultramodern natural and synthetic polymer hydrogel scaffolds for articular cartilage repair and regeneration

Authors: Chun-Sheng Li, Yan Xu, Juan Li, Shu-Hao Qin, Shao-Wen Huang, Xue-Mei Chen, Yi Luo, Cheng-Tao Gao, Jian-Hui Xiao

Source: BioMedical Engineering OnLine, Vol 24, Iss 1, Pp 1-26 (2025)

Subject Terms: Articular cartilage injury, Cartilage tissue engineering, Hydrogel scaffold, Repair and regeneration, Medical technology, R855-855.5

File Description: electronic resource

Relation: https://doaj.org/toc/1475-925X

Access URL: https://doaj.org/article/19c149d5c5154fcf9d1b1e1c23a3163b

The evolution and development of railway passenger transportation clearing method in China

Authors: Yin Zhou, Wei Fang, Yan Xu, Huaixiang Wang, Lu Liu

Source: Railway Sciences, Vol 4, Iss 1, Pp 97-107 (2025)

Subject Terms: Railway transport, Railway passenger transport business, Carrier system, Clearing method, Evolution and development, Transportation engineering, TA1001-1280, Railroad engineering and operation, TF1-1620

File Description: electronic resource

Relation: https://doaj.org/toc/2755-0907; https://doaj.org/toc/2755-0915

Access URL: https://doaj.org/article/76b6341fc5384313b0b40f5363f6a291

Correction: Population sequencing of cherry accessions unravels the evolution of Cerasus species and the selection of genetic characteristics in edible cherries

Authors: Yahui Lei, Songtao Jiu, Yan Xu, Baozheng Chen, Xiao Dong, Zhengxin Lv, Anthony Bernard, Xunju Liu, Lei Wang, Li Wang, Jiyuan Wang, Zhuo Zhang, Yuliang Cai, Wei Zheng, Xu Zhang, Fangdong Li, Hongwen Li, Congli Liu, Ming Li, Jing Wang, Jijun Zhu, Lei Peng, Teresa Barreneche, Fei Yu, Shiping Wang, Yang Dong, Dirlewanger Elisabeth, Shengchang Duan, Caixi Zhang

Source: Molecular Horticulture, Vol 5, Iss 1, Pp 1-3 (2025)

Subject Terms: Plant culture, SB1-1110, Botany, QK1-989

File Description: electronic resource

Relation: https://doaj.org/toc/2730-9401

Access URL: https://doaj.org/article/8921e53da83b433097793ba538acb17e

Free fatty acid receptor-4 regulates T-cell-mediated allogeneic reaction through activating an aryl hydrocarbon receptor pathway

Authors: Maxwell Duah, Fei Zheng, Jingyi Shen, Yan Xu, Shuo Cao, Zhiling Yan, Qiu Lan, Ying Wang, Kailin Xu, Bin Pan

Source: Acta Pharmaceutica Sinica B, Vol 15, Iss 1, Pp 224-238 (2025)

Subject Terms: Free fatty acid receptor-4, CpdA, T-cell, Graft-versus-host disease, Allogeneic reaction, Aryl hydrocarbon receptor, Therapeutics. Pharmacology, RM1-950

File Description: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S2211383524004684; https://doaj.org/toc/2211-3835

Access URL: https://doaj.org/article/04c3f6e5c20d48a3b552609621477768