A Genome-wide association study identifies candidate genes for heat tolerance in adult cucumber plants

Authors: Zaizhan Wang, Shaoyun Dong, Yanyan Liu, Diane M. Beckles, Caixia Li, Jianan Han, Yi Zhang, Xiaoping Liu, Jiantao Guan, Xingfang Gu, Han Miao, Shengping Zhang

Source: Horticultural Plant Journal, Vol 11, Iss 2, Pp 774-787 (2025)

Subject Terms: Cucumis sativus L., Heat tolerance, GWAS, Candidate gene analysis, Plant culture, SB1-1110

File Description: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S2468014123001899; https://doaj.org/toc/2468-0141

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Candidate genes associated with low temperature tolerance in cucumber adult plants identified by combining GWAS & QTL mapping

Authors: Caixia Li, Shaoyun Dong, Diane M. Beckles, Xiaoping Liu, Jiantao Guan, Zaizhan Wang, Xingfang Gu, Han Miao, Shengping Zhang

Source: Stress Biology, Vol 4, Iss 1, Pp 1-17 (2024)

Subject Terms: Cucumber, Low temperature tolerance, GWAS, QTL, Candidate gene analysis, Biology (General), QH301-705.5

File Description: electronic resource

Relation: https://doaj.org/toc/2731-0450

Access URL: https://doaj.org/article/38bc6f614d8a43fda495fcea1e3d680e

Genome-wide identification of Brassinosteroid insensitive 1-associated receptor kinase 1 genes and expression analysis in response to pathogen infection in cucumber (Cucumis sativus L.)

Authors: Jianan Han, Shaoyun Dong, Jiantao Guan, Xiaoping Liu, Xingfang Gu, Han Miao, Shengping Zhang

Source: BMC Plant Biology, Vol 24, Iss 1, Pp 1-12 (2024)

Subject Terms: Cucumis sativus L., BAK1, Gene family, Expression pattern, Pathogen infection, Botany, QK1-989

File Description: electronic resource

Relation: https://doaj.org/toc/1471-2229

Access URL: https://doaj.org/article/710cef8cd35b4e1e8d941ef77e45bc66

Genome-wide association analysis reveal candidate genes and haplotypes related to root weight in cucumber (Cucumis sativus L.)

Authors: Zhuonan Dai, Shaoyun Dong, Hexu Cai, Diane M. Beckles, Jiantao Guan, Xiaoping Liu, Xingfang Gu, Han Miao, Shengping Zhang

Source: Frontiers in Plant Science, Vol 15 (2024)

Subject Terms: cucumber (Cucumis sativus L.), root, GWAS (genome-wide association study), candidate genes, haplotypes, Plant culture, SB1-1110

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fpls.2024.1417314/full; https://doaj.org/toc/1664-462X

Access URL: https://doaj.org/article/5539cc36ff70454387b1647fe660474e

Genome-wide association study reveals candidate genes for gummy stem blight resistance in cucumber

Authors: Jianan Han, Shaoyun Dong, Yanxia Shi, Zhuonan Dai, Han Miao, Baoju Li, Xingfang Gu, Shengping Zhang

Source: Horticultural Plant Journal, Vol 9, Iss 2, Pp 261-272 (2023)

Subject Terms: Cucumber (Cucumis sativus L.), GSB, GWAS, Quantitative trait loci, QTL, Candidate genes, Plant culture, SB1-1110

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Relation: http://www.sciencedirect.com/science/article/pii/S2468014122000577; https://doaj.org/toc/2468-0141

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Genome-wide analysis of expansins and their role in fruit spine development in cucumber (Cucumis sativus L.)

Authors: Xiaoping Liu, Shaoyun Dong, Han Miao, Kailiang Bo, Caixia Li, Yingying Yang, Xingfang Gu, Shengping Zhang

Source: Horticultural Plant Journal, Vol 8, Iss 6, Pp 757-768 (2022)

Subject Terms: Cucumber, Expansins, Phylogenetic analysis, Collinearity, Gene expression, Fruit spine, Plant culture, SB1-1110

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Relation: http://www.sciencedirect.com/science/article/pii/S2468014121001382; https://doaj.org/toc/2468-0141

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GWAS reveals novel loci and identifies a pentatricopeptide repeat-containing protein (CsPPR) that improves low temperature germination in cucumber

Authors: Caixia Li, Shaoyun Dong, Diane M. Beckles, Xiaoping Liu, Jiantao Guan, Xingfang Gu, Han Miao, Shengping Zhang

Source: Frontiers in Plant Science, Vol 14 (2023)

Subject Terms: cucumber, low temperature germination, GWAS, polygenic, CsPPR, Plant culture, SB1-1110

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Relation: https://www.frontiersin.org/articles/10.3389/fpls.2023.1116214/full; https://doaj.org/toc/1664-462X

Access URL: https://doaj.org/article/2d14c79d55054c95b694354c0f103a4e

Fine mapping a quantitative trait locus underlying seedling resistance to gummy stem blight using a residual heterozygous lines-derived strategy in cucumber

Authors: Jianan Han, Shaoyun Dong, Xiaoping Liu, Yanxia Shi, Diane M. Beckles, Xingfang Gu, Han Miao, Shengping Zhang

Source: Frontiers in Plant Science, Vol 13 (2022)

Subject Terms: Cucumis sativus L., gummy stem blight, residual heterozygous line (RHL)-derived strategy, fine-mapping, candidate genes, Plant culture, SB1-1110

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Relation: https://www.frontiersin.org/articles/10.3389/fpls.2022.968811/full; https://doaj.org/toc/1664-462X

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QTL mapping and genome-wide association study reveal two novel loci associated with green flesh color in cucumber

Authors: Kailiang Bo, Shuang Wei, Weiping Wang, Han Miao, Shaoyun Dong, Shengping Zhang, Xingfang Gu

Source: BMC Plant Biology, Vol 19, Iss 1, Pp 1-13 (2019)

Subject Terms: Cucumber, Green flesh, Chromosome rearrangements, QTL, GWAS, Botany, QK1-989

File Description: electronic resource

Relation: http://link.springer.com/article/10.1186/s12870-019-1835-6; https://doaj.org/toc/1471-2229

Access URL: https://doaj.org/article/6c02f1d6d40a439ebfd14f7fc384d595

Quantitative Trait Loci Mapping and Candidate Gene Analysis of Low Temperature Tolerance in Cucumber Seedlings

Authors: Shaoyun Dong, Weiping Wang, Kailiang Bo, Han Miao, Zichao Song, Shuang Wei, Shengping Zhang, Xingfang Gu

Source: Frontiers in Plant Science, Vol 10 (2019)

Subject Terms: cucumber, low temperature tolerance, quantitative trait locus mapping, in silico bulked segregant analysis, candidate gene analysis, Plant culture, SB1-1110

File Description: electronic resource

Relation: https://www.frontiersin.org/article/10.3389/fpls.2019.01620/full; https://doaj.org/toc/1664-462X

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QTL Mapping of Heat Tolerance in Cucumber (Cucumis sativus L.) at Adult Stage

Authors: Yanyan Liu, Shaoyun Dong, Shuang Wei, Weiping Wang, Han Miao, Kailiang Bo, Xingfang Gu, Shengping Zhang

Source: Plants, Vol 10, Iss 2, p 324 (2021)

Subject Terms: cucumber (Cucumis sativus L.), heat tolerance, genetic analysis, QTL mapping, candidate gene analysis, Botany, QK1-989

File Description: electronic resource

Relation: https://www.mdpi.com/2223-7747/10/2/324; https://doaj.org/toc/2223-7747

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Identification of QTLs Controlling Salt Tolerance in Cucumber (Cucumis sativus L.) Seedlings

Authors: Dongrang Liu, Shaoyun Dong, Kailiang Bo, Han Miao, Caixia Li, Yanyan Zhang, Shengping Zhang, Xingfang Gu

Source: Plants, Vol 10, Iss 1, p 85 (2021)

Subject Terms: cucumber seedlings, salt stress, quantitative trait loci, candidate genes, Botany, QK1-989

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Relation: https://www.mdpi.com/2223-7747/10/1/85; https://doaj.org/toc/2223-7747

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Genome-Wide Characterization of Cucumber (Cucumis sativus L.) GRAS Genes and Their Response to Various Abiotic Stresses

Authors: Caixia Li, Shaoyun Dong, Xiaoping Liu, Kailiang Bo, Han Miao, Diane M. Beckles, Shengping Zhang, Xingfang Gu

Source: Horticulturae, Vol 6, Iss 4, p 110 (2020)

Subject Terms: cucumber, GRAS, gene expression, abiotic stress, phytohormone, Plant culture, SB1-1110

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Relation: https://www.mdpi.com/2311-7524/6/4/110; https://doaj.org/toc/2311-7524

Access URL: https://doaj.org/article/34a39bd86d8f46c9b4ec6b03c8c57519

Identification of Novel Loci and Candidate Genes for Cucumber Downy Mildew Resistance Using GWAS

Authors: Xiaoping Liu, Hongwei Lu, Panna Liu, Han Miao, Yuling Bai, Xingfang Gu, Shengping Zhang

Source: Plants, Vol 9, Iss 12, p 1659 (2020)

Subject Terms: allele-mining, downy mildew resistance, GWAS, polygenic, recessive, Botany, QK1-989

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Relation: https://www.mdpi.com/2223-7747/9/12/1659; https://doaj.org/toc/2223-7747

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Identification of Quantitative Trait Loci Controlling High-Temperature Tolerance in Cucumber (Cucumis sativus L.) Seedlings

Authors: Shaoyun Dong, Song Zhang, Shuang Wei, Yanyan Liu, Caixia Li, Kailiang Bo, Han Miao, Xingfang Gu, Shengping Zhang

Source: Plants, Vol 9, Iss 9, p 1155 (2020)

Subject Terms: cucumber seedlings, thermotolerance, QTL mapping, Botany, QK1-989

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Relation: https://www.mdpi.com/2223-7747/9/9/1155; https://doaj.org/toc/2223-7747

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Inheritance and QTL mapping of cucumber mosaic virus resistance in cucumber (Cucumis Sativus L.).

Authors: Lixue Shi, Yuhong Yang, Qing Xie, Han Miao, Kailiang Bo, Zichao Song, Ye Wang, Bingyan Xie, Shengping Zhang, Xingfang Gu

Source: PLoS ONE, Vol 13, Iss 7, p e0200571 (2018)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: https://journals.plos.org/plosone/article/file?id=10.1371/journal.pone.0200571&type=printable; https://doaj.org/toc/1932-6203

Access URL: https://doaj.org/article/43ee8de0ec4440c0b0aa8b7236626428

Genetic diversity and population structure of cucumber (Cucumis sativus L.).

Authors: Jing Lv, Jianjian Qi, Qiuxiang Shi, Di Shen, Shengping Zhang, Guangjin Shao, Hang Li, Zhanyong Sun, Yiqun Weng, Yi Shang, Xingfang Gu, Xixiang Li, Xiaoguo Zhu, Jinzhe Zhang, Robbert van Treuren, Willem van Dooijeweert, Zhonghua Zhang, Sanwen Huang

Source: PLoS ONE, Vol 7, Iss 10, p e46919 (2012)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: http://europepmc.org/articles/PMC3470563?pdf=render; https://doaj.org/toc/1932-6203

Access URL: https://doaj.org/article/93ffbd98a36e41c5862ba5dfa8781a93

An integrated genetic and cytogenetic map of the cucumber genome.

Authors: Yi Ren, Zhonghua Zhang, Jinhua Liu, Jack E Staub, Yonghua Han, Zhouchao Cheng, Xuefeng Li, Jingyuan Lu, Han Miao, Houxiang Kang, Bingyan Xie, Xingfang Gu, Xiaowu Wang, Yongchen Du, Weiwei Jin, Sanwen Huang

Source: PLoS ONE, Vol 4, Iss 6, p e5795 (2009)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: http://europepmc.org/articles/PMC2685989?pdf=render; https://doaj.org/toc/1932-6203

Access URL: https://doaj.org/article/827d0dcf0a1d41acb4ae562c062fb1f4

Ensemble tracking based on randomized trees

Authors: Xingfang, Gu, Yaobin, Mao, Jianshou, Kong

Source: Proceedings of the 31st Chinese Control Conference Control Conference (CCC), 2012 31st Chinese. :3818-3823 Jul, 2012

Relation: 2012 Chinese Control Conference (CCC)

Pilot-scale enrichment of anammox biofilm using secondary effluent as source water

Authors: Runxian Tao, Xingcan Zheng, Xingfang Guo, Mai Li, Shifeng Shen, Min Yang, Yongli Sun, Fansong Wu

Source: Water Science and Technology, Vol 83, Iss 4, Pp 894-905 (2021)

Subject Terms: anammox, biofilm, enrichment procedure, large scale, microbial community, secondary effluent, Environmental technology. Sanitary engineering, TD1-1066

File Description: electronic resource

Relation: http://wst.iwaponline.com/content/83/4/894; https://doaj.org/toc/0273-1223; https://doaj.org/toc/1996-9732

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