Integrated microbiome and metabolome analysis reveals altered gut microbial communities and metabolite profiles in dairy cows with subclinical mastitis

Authors: Jie Yu, Chenhui Liu, Dingfa Wang, Pingmin Wan, Lei Cheng, Xianghua Yan

Source: BMC Microbiology, Vol 25, Iss 1, Pp 1-21 (2025)

Subject Terms: Dairy cows, Subclinical mastitis, Biochemical indicators, Gut microbial community, Metabolomics, Microbiology, QR1-502

File Description: electronic resource

Relation: https://doaj.org/toc/1471-2180

Access URL: https://doaj.org/article/36cb8075ee8b4d01a5371a976746a039

Characterizing the gut phageome and phage-borne antimicrobial resistance genes in pigs

Authors: Jun Hu, Jianwei Chen, Yangfan Nie, Changhao Zhou, Qiliang Hou, Xianghua Yan

Source: Microbiome, Vol 12, Iss 1, Pp 1-17 (2024)

Subject Terms: Pig, Metagenomic, Gut phageome, PhaBOX, Antimicrobial resistance genes, Microbial ecology, QR100-130

File Description: electronic resource

Relation: https://doaj.org/toc/2049-2618

Access URL: https://doaj.org/article/e145fff4f7f84348b60e604bb6a9eaeb

Knowledge graph-derived feed efficiency analysis via pig gut microbiota

Authors: Junmei Zhang, Qin Jiang, Zhihong Du, Yilin Geng, Yuren Hu, Qichang Tong, Yunfeng Song, Hong-Yu Zhang, Xianghua Yan, Zaiwen Feng

Source: Scientific Reports, Vol 14, Iss 1, Pp 1-16 (2024)

Subject Terms: Pig, Gut microbiota, Knowledge graph, Feed efficiency, Medicine, Science

File Description: electronic resource

Relation: https://doaj.org/toc/2045-2322

Access URL: https://doaj.org/article/f323b32de8844b09802569dbb3f4174a

Lactobacillus-derived protoporphyrin IX and SCFAs regulate the fiber size via glucose metabolism in the skeletal muscle of chickens

Authors: Liyuan Cai, Xinkai Wang, Xiaoyan Zhu, Yunzheng Xu, Wenxia Qin, Jing Ren, Qin Jiang, Xianghua Yan

Source: mSystems, Vol 9, Iss 6 (2024)

Subject Terms: chicken, Lactobacillus, skeletal muscle, glucose metabolism, fiber size, Microbiology, QR1-502

File Description: electronic resource

Relation: https://doaj.org/toc/2379-5077

Access URL: https://doaj.org/article/ac28b17facba4f2c9ec5e05aec69f930

Corrigendum to 'Point-of-care testing for lysine concentration in swine serum via blue-emissive carbon dots entrapped microfluidic chip' [Animal Nutrition 12 (2023) 236–244]

Authors: Chizhu Ding, Xiang Chen, Xiaoyu Chen, Yue Liu, Menglin Xia, Ziyi He, Qinshu Kang, Xianghua Yan

Source: Animal Nutrition, Vol 13, Iss , Pp 435-438 (2023)

Subject Terms: Animal culture, SF1-1100

File Description: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S2405654523000689; https://doaj.org/toc/2405-6545

Access URL: https://doaj.org/article/222b5c300ee04f76a7253f442ca8e7e1

Multi-omics analysis reveals gut microbiota-ovary axis contributed to the follicular development difference between Meishan and Landrace × Yorkshire sows

Authors: Baoyang Xu, Wenxia Qin, Yuwen Chen, Yimei Tang, Shuyi Zhou, Juncheng Huang, Libao Ma, Xianghua Yan

Source: Journal of Animal Science and Biotechnology, Vol 14, Iss 1, Pp 1-15 (2023)

Subject Terms: Follicular development, Granulosa cells apoptosis, Gut microbiota, Short-chain fatty acids, Sows, Animal culture, SF1-1100, Veterinary medicine, SF600-1100

File Description: electronic resource

Relation: https://doaj.org/toc/2049-1891

Access URL: https://doaj.org/article/e665940cabd04743a8bd80eb8fe929f4

Gut microbiota-derived 3-phenylpropionic acid promotes intestinal epithelial barrier function via AhR signaling

Authors: Jun Hu, Jianwei Chen, Xiaojian Xu, Qiliang Hou, Jing Ren, Xianghua Yan

Source: Microbiome, Vol 11, Iss 1, Pp 1-23 (2023)

Subject Terms: Intestinal epithelial barrier, Fecal microbiota transplantation, Bacteroides fragilis, 3-Phenylpropionic acid, Aryl hydrocarbon receptor, Microbial ecology, QR100-130

File Description: electronic resource

Relation: https://doaj.org/toc/2049-2618

Access URL: https://doaj.org/article/aebd2e252ccf4aa5af350206e55f8dbe

Point-of-care testing for lysine concentration in swine serum via blue-emissive carbon dot-entrapped microfluidic chip

Authors: Chizhu Ding, Xiang Chen, Xiaoyu Chen, Yue Liu, Menglin Xia, Ziyi He, Qinshu Kang, Xianghua Yan

Source: Animal Nutrition, Vol 12, Iss , Pp 236-244 (2023)

Subject Terms: Lysine, Swine serum, Carbon dots, Microfluidics, Point-of-care testing, Animal culture, SF1-1100

File Description: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S2405654522001433; https://doaj.org/toc/2405-6545

Access URL: https://doaj.org/article/8a326f5395744460828affeebe0224a2

Identification of gut microbes associated with feed efficiency by daily-phase feeding strategy in growing-finishing pigs

Authors: Qin Jiang, Chunlin Xie, Lingli Chen, Hongli Xiao, Zhilian Xie, Xiaoyan Zhu, Libao Ma, Xianghua Yan

Source: Animal Nutrition, Vol 12, Iss , Pp 42-53 (2023)

Subject Terms: Daily-phase feeding, Feed efficiency, Gut microbiota, Nutrient metabolism, Pig, Animal culture, SF1-1100

File Description: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S2405654522001330; https://doaj.org/toc/2405-6545

Access URL: https://doaj.org/article/6cb6af97e92d4ac4b870baeed7a86a02

Core-predominant gut fungus Kazachstania slooffiae promotes intestinal epithelial glycolysis via lysine desuccinylation in pigs

Authors: Jun Hu, Jianwei Chen, Qiliang Hou, Xiaojian Xu, Jing Ren, Libao Ma, Xianghua Yan

Source: Microbiome, Vol 11, Iss 1, Pp 1-24 (2023)

Subject Terms: Gut fungi, Kazachstania slooffiae, Lysine succinylation, Intestinal epithelium, Glycolysis, Sirtuin 5, Microbial ecology, QR100-130

File Description: electronic resource

Relation: https://doaj.org/toc/2049-2618

Access URL: https://doaj.org/article/7b829a64ba8a40cbbf7ec43c94c0693e

Amino Turbo Chirality and Its Asymmetric Control

Authors: Ting Xu, Yu Wang, Shengzhou Jin, Anis U. Rahman, Xianghua Yan, Qingkai Yuan, Hao Liu, Jia-Yin Wang, Wenxin Yan, Yinchun Jiao, Ruibin Liang, Guigen Li

Source: Research, Vol 7 (2024)

Subject Terms: Science

File Description: electronic resource

Relation: https://doaj.org/toc/2639-5274

Access URL: https://doaj.org/article/e87a317846c6428da8c483accd78debc

Bacteroides-derived isovaleric acid enhances mucosal immunity by facilitating intestinal IgA response in broilers

Authors: Xinkai Wang, Yifan Hu, Xiaoyan Zhu, Liyuan Cai, Muhammad Zahid Farooq, Xianghua Yan

Source: Journal of Animal Science and Biotechnology, Vol 14, Iss 1, Pp 1-22 (2023)

Subject Terms: Bacteroides, Chicken, IgA, Intestinal health, Isovaleric acid, Macrophage, Animal culture, SF1-1100, Veterinary medicine, SF600-1100

File Description: electronic resource

Relation: https://doaj.org/toc/2049-1891

Access URL: https://doaj.org/article/0d4608255e4344a2a4e13c508b8b58ba

Dietary ellagic acid supplementation attenuates intestinal damage and oxidative stress by regulating gut microbiota in weanling piglets

Authors: Wenxia Qin, Baoyang Xu, Yuwen Chen, Wenbo Yang, Yunzheng Xu, Juncheng Huang, Ting Duo, Yihua Mao, Guozong Zhou, Xianghua Yan, Libao Ma

Source: Animal Nutrition, Vol 11, Iss , Pp 322-333 (2022)

Subject Terms: Ellagic acid, Gut microbiota, Weanling piglets, Intestinal damage, Oxidative stress, Animal culture, SF1-1100

File Description: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S240565452200107X; https://doaj.org/toc/2405-6545

Access URL: https://doaj.org/article/e378d4c2b2af4155a786993f831615d8

Integrated analysis of multi-tissues lipidome and gut microbiome reveals microbiota-induced shifts on lipid metabolism in pigs

Authors: Chunlin Xie, Xiaoyan Zhu, Baoyang Xu, Yaorong Niu, Xuelei Zhang, Libao Ma, Xianghua Yan

Source: Animal Nutrition, Vol 10, Iss , Pp 280-293 (2022)

Subject Terms: Pig, Gut microbiota, Lipidome, Fecal microbiota transplantation, Lipid metabolism, Animal culture, SF1-1100

File Description: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S2405654522000555; https://doaj.org/toc/2405-6545

Access URL: https://doaj.org/article/93efce92086e438f807851cc43e9278f

Multi-omics analysis reveals gut microbiota-induced intramuscular fat deposition via regulating expression of lipogenesis-associated genes

Authors: Chunlin Xie, Junyong Teng, Xinkai Wang, Baoyang Xu, Yaorong Niu, Libao Ma, Xianghua Yan

Source: Animal Nutrition, Vol 9, Iss , Pp 84-99 (2022)

Subject Terms: Gut microbiota, Lipid deposition, Intramuscular fat, Meat quality, Fecal microbiota transplantation, Animal culture, SF1-1100

File Description: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S2405654521002110; https://doaj.org/toc/2405-6545

Access URL: https://doaj.org/article/2dfb54c7c84a4979988dd28278f921d6

Gut microbiota contributes to the development of endometrial glands in gilts during the ovary-dependent period

Authors: Baoyang Xu, Wenxia Qin, Yiqin Yan, Yimei Tang, Shuyi Zhou, Juncheng Huang, Chunlin Xie, Libao Ma, Xianghua Yan

Source: Journal of Animal Science and Biotechnology, Vol 12, Iss 1, Pp 1-13 (2021)

Subject Terms: Endometrial gland, Fecal microbiota transplantation, Gut microbiota, Meishan gilts, Steroid hormones, Untargeted metabolomics, Animal culture, SF1-1100, Veterinary medicine, SF600-1100

File Description: electronic resource

Relation: https://doaj.org/toc/2049-1891

Access URL: https://doaj.org/article/8945df1e16f748f59a08643d99688d24

Correction: Gut microbiota-derived 3-phenylpropionic acid promotes intestinal epithelial barrier function via AhR signaling

Authors: Jun Hu, Jianwei Chen, Xiaojian Xu, Qiliang Hou, Jing Ren, Xianghua Yan

Source: Microbiome, Vol 11, Iss 1, Pp 1-1 (2023)

Subject Terms: Microbial ecology, QR100-130

File Description: electronic resource

Relation: https://doaj.org/toc/2049-2618

Access URL: https://doaj.org/article/0f756658d6a4405c879a99a978eed629

Dietary ε-Polylysine Affects on Gut Microbiota and Plasma Metabolites Profiling in Mice

Authors: Xuelei Zhang, Baoyang Xu, Zhenping Hou, Chunlin Xie, Yaorong Niu, Qiuzhong Dai, Xianghua Yan, Duanqin Wu

Source: Frontiers in Nutrition, Vol 9 (2022)

Subject Terms: ε-polylysine, glycerophospholipid metabolism, gut microbiota, growth performance, C57 mice, Nutrition. Foods and food supply, TX341-641

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fnut.2022.842686/full; https://doaj.org/toc/2296-861X

Access URL: https://doaj.org/article/5f14cf203bbe4dd4aceaa6acfc1d37db

Lactobacillus frumenti mediates energy production via fatty acid β-oxidation in the liver of early-weaned piglets

Authors: Zhichang Wang, Jun Hu, Wenyong Zheng, Tao Yang, Xinkai Wang, Chunlin Xie, Xianghua Yan

Source: Journal of Animal Science and Biotechnology, Vol 10, Iss 1, Pp 1-12 (2019)

Subject Terms: Early-weaned piglets, Fatty acid β-oxidation, Gut microbiota, Lactobacillus frumenti, Metabolomic analysis, Animal culture, SF1-1100, Veterinary medicine, SF600-1100

File Description: electronic resource

Relation: https://doaj.org/toc/2049-1891

Access URL: https://doaj.org/article/87899b57ffe44a3f845a5f7b2323e559

Computational Insights Into the Influence of Substitution Groups on the Inclusion Complexation of β-Cyclodextrin

Authors: Xianghua Yan, Yue Wang, Tong Meng, Hui Yan

Source: Frontiers in Chemistry, Vol 9 (2021)

Subject Terms: 2-hydroxyprohyl-cyclodextrin, sulfonated butyl-cyclodextrin, molecular dynamic simulation, inclusion complex, conformational change, Chemistry, QD1-999

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fchem.2021.668400/full; https://doaj.org/toc/2296-2646

Access URL: https://doaj.org/article/cf55a4978c5847e590be25de15d4fd12