Clinical validity of dried blood spot assay for the measurement of functional C1 inhibitor in angioedema due to C1 inhibitor deficiency

Authors: Bernstein, Jonathan A. ^a, Cheng, Jie ^b, Pisani, Thomas ^b, Sexton, Dan ^b, Whitaker, Rachel E. ^b, Nova Estepan, Daniel ^b, Inhaber, Neil ^{b, ∗}

Source: In Journal of Allergy and Clinical Immunology: Global May 2025 4(2)

Phage-antibiotic synergy inhibited by temperate and chronic virus competition

Authors: Landa, Kylie J, Mossman, Lauren M, Whitaker, Rachel J, Rapti, Zoi, Clifton, Sara M

Subject Terms: Quantitative Biology - Populations and Evolution

Access URL: http://arxiv.org/abs/2104.08989

Temperate and chronic virus competition leads to low lysogen frequency

Authors: Clifton, Sara M., Whitaker, Rachel J., Rapti, Zoi

Subject Terms: Quantitative Biology - Populations and Evolution

Access URL: http://arxiv.org/abs/1911.07233

A short prokaryotic Argonaute activates membrane effector to confer antiviral defense

Authors: Zeng, Zhifeng ^{1, 2}, Chen, Yu ^{1, 2}, Pinilla-Redondo, Rafael ³, Shah, Shiraz A. ⁴, Zhao, Fen ^{2, 5}, Wang, Chen ^{2, 5}, Hu, Zeyu ^{1, 2}, Wu, Chang ^{1, 2}, Zhang, Changyi ⁶, Whitaker, Rachel J. ⁶, She, Qunxin ⁷, Han, Wenyuan ^{1, 2, 8, ∗}

Source: In Cell Host & Microbe 13 July 2022 30(7):930-943

Temperate and chronic virus competition leads to low lysogen frequency

Authors: Clifton, Sara M. ^{a, ⁎}, Whitaker, Rachel J. ^{b, c}, Rapti, Zoi ^{c, d}

Source: In Journal of Theoretical Biology 21 August 2021 523

Infection with Bacteroides Phage BV01 Alters the Host Transcriptome and Bile Acid Metabolism in a Common Human Gut Microbe

Authors: Campbell, Danielle E., Ly, Lindsey K., Ridlon, Jason M., Hsiao, Ansel, Whitaker, Rachel J., Degnan, Patrick H.

Source: In Cell Reports 15 September 2020 32(11)

Reply to: Natively expressed AcrIII-1 does not function as an anti-CRISPR protein.

Authors: Athukoralage, Januka S., McMahon, Stephen A., Zhang, Changyi, Grüschow, Sabine, Graham, Shirley, Krupovic, Mart, Whitaker, Rachel J., Gloster, Tracey M., White, Malcolm F.

Source: Nature; Apr2025, Vol. 640 Issue 8059, pE15-E17, 3p

Duplication of leucyl-tRNA synthetase in an archaeal extremophile may play a role in adaptation to variable environmental conditions

Authors: Weitzel, Christopher S., Li, Li, Zhang, Changyi ^**, Eilts, Kristen K., Bretz, Nicholas M., Gatten, Alex L., Whitaker, Rachel J. ^**, Martinis, Susan A.

Source: In Journal of Biological Chemistry 3 April 2020 295(14):4563-4576

Intrinsic symmetry groups of links with 8 and fewer crossings

Authors: Berglund, Michael, Cantarella, Jason, Casey, Meredith Perrie, Dannenberg, Ellie, George, Whitney, Johnson, Aja, Kelly, Amelia, LaPointe, Al, Mastin, Matt, Parsley, Jason, Rooney, Jacob, Whitaker, Rachel

Source: Symmetry, 2012; 4(1):143-207

Subject Terms: Mathematics - Geometric Topology, 57M25

Access URL: http://arxiv.org/abs/1010.3234

Diversified local CRISPR-Cas immunity to viruses of Sulfolobus islandicus

Authors: Pauly, Matthew D., Bautista, Maria A., Black, Jesse A., Whitaker, Rachel J.

Source: Philosophical Transactions: Biological Sciences, 2019 May . 374(1772), 1-14.

Access URL: https://www.jstor.org/stable/26643694

The ecology and evolution of microbial CRISPR-Cas adaptive immune systems

Authors: Westra, Edze R., van Houte, Stineke, Gandon, Sylvain, Whitaker, Rachel

Source: Philosophical Transactions: Biological Sciences, 2019 May . 374(1772), 1-8.

Access URL: https://www.jstor.org/stable/26643687

Perspectives on the future of ecology, evolution, and biodiversity from the Council on Microbial Sciences of the American Society for Microbiology.

Authors: Akob, Denise M., Oates, A. Elizabeth, Girguis, Peter R., Badgley, Brian D., Cooper, Vaughn S., Poretsky, Rachel S., Tierney, Braden T., Litchman, Elena, Whitaker, Rachel J., Whiteson, Katrine L., Metcalf, C. Jessica E.

Source: MSphere; Nov2024, Vol. 9 Issue 11, p1-16, 16p

Phage-mediated resolution of genetic conflict alters the evolutionary trajectory of Pseudomonas aeruginosa lysogens.

Authors: Suttenfield, Laura C., Zoi Rapti, Chandrashekhar, Jayadevi H., Steinlein, Amelia C., Vera, Juan Cristobal, Ted Kim, Whitaker, Rachel J.

Source: MSystems; Sep2024, Vol. 9 Issue 9, p1-19, 19p

Characterization of tRNALeu binding interactions with Cu2 + and Pb2 + and their biological implications

Authors: Dimkovikj, Aleksandar, Banton, Mallory J., McDanel, Lance A., Arndt, Katelin N., Unvert, Katelyn E., Thorn, Elizabeth K., Marco, Ana Royo, Hellmann-Whitaker, Rachel A.

Source: In Journal of Inorganic Biochemistry June 2017 171:90-99

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CRISPR-Cas Gatekeeper: Slow on the Uptake but Gets the Job Done

Authors: Whitaker, Rachel J., Vanderpool, Carin K.

Source: In Cell Host & Microbe 10 February 2016 19(2):135-137

Inferring Speciation Processes from Patterns of Natural Variation in Microbial Genomes

Authors: Krause, David J., Whitaker, Rachel J.

Source: Systematic Biology, 2015 Nov 01. 64(6), 926-935.

Access URL: http://www.jstor.org/stable/43700178

Zinc is the molecular “switch” that controls the catalytic cycle of bacterial leucyl-tRNA synthetase

Authors: Kumar, Manonmani, Kumar, Sathish A.P., Dimkovikj, Aleksandar, Baykal, Layla N., Banton, Mallory J., Outlaw, Maya M., Polivka, Kristen E., Hellmann-Whitaker, Rachel A.

Source: In Journal of Inorganic Biochemistry January 2015 142:59-67

Geographic Barriers Isolate Endemic Populations of Hyperthermophilic Archaea

Authors: Whitaker, Rachel J., Grogan, Dennis W., Taylor, John W.

Source: Science, 2003 Aug . 301(5635), 976-978.

Access URL: https://www.jstor.org/stable/3834848

Local and Environmental Reservoirs of Salmonella enterica After Hurricane Florence Flooding.

Authors: Mao, Yuqing, Zeineldin, Mohamed, Usmani, Moiz, Jutla, Antarpreet, Shisler, Joanna L., Whitaker, Rachel J., Nguyen, Thanh H.

Source: Geohealth; Nov2023, Vol. 7 Issue 11, p1-18, 18p

Subject Terms: SALMONELLA enterica, HURRICANE Florence, 2018, MOBILE genetic elements, SWINE farms, SINGLE nucleotide polymorphisms, INFRASTRUCTURE (Economics), ANTIBIOTIC residues, FECAL contamination

Geographic Terms: NORTH Carolina