Transcriptome sequencing and anthocyanin metabolite analysis involved in leaf red color formation of Cinnamomum camphora

Authors: Xinxin Wu, Yan Li, Tong Du, Li Kang, Baolei Pei, Weibing Zhuang, Fang Tang

Source: Scientific Reports, Vol 14, Iss 1, Pp 1-16 (2024)

Subject Terms: Cinnamomum camphora, RNA-Seq, Anthocyanin biosynthesis, Leaf color, Chlorophyll degradation, Medicine, Science

File Description: electronic resource

Relation: https://doaj.org/toc/2045-2322

Access URL: https://doaj.org/article/54c41c93f9a24d009accdf31f1860e78

Characterization of the complete chloroplast genome of ‘Quanhong poplar’ (Populus deltoides W. Bartram ex Humphry Marshall, 2011)

Authors: Weibing Zhuang, Yuhang Li, Xiaochun Shu, Zhong Wang, Yan Wang, Tao Wang

Source: Mitochondrial DNA. Part B. Resources, Vol 9, Iss 2, Pp 285-289 (2024)

Subject Terms: Chloroplast genome, phylogenetic analysis, Quanhong poplar, whole-genome sequencing, Genetics, QH426-470

File Description: electronic resource

Relation: https://doaj.org/toc/2380-2359

Access URL: https://doaj.org/article/4297bf257f194765b0030f29b088779c

Functions and Regulatory Mechanisms of bHLH Transcription Factors during the Responses to Biotic and Abiotic Stresses in Woody Plants

Authors: Tengyue Yan, Xiaochun Shu, Chuanli Ning, Yuhang Li, Zhong Wang, Tao Wang, Weibing Zhuang

Source: Plants, Vol 13, Iss 16, p 2315 (2024)

Subject Terms: bHLH transcription factors, stress tolerance mechanism, woody plants, biotic stress response, abiotic stress response, Botany, QK1-989

File Description: electronic resource

Relation: https://www.mdpi.com/2223-7747/13/16/2315; https://doaj.org/toc/2223-7747

Access URL: https://doaj.org/article/5e0a52d7217242c3883a444c753717b4

Family characteristics, phylogenetic reconstruction, and potential applications of the plant BAHD acyltransferase family

Authors: Donghuan Xu, Zhong Wang, Weibing Zhuang, Tao Wang, Yinfeng Xie

Source: Frontiers in Plant Science, Vol 14 (2023)

Subject Terms: BAHD acyltransferase, protein structure, catalytic mechanism, phylogenetic reconstruction, acylation reactions, Plant culture, SB1-1110

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fpls.2023.1218914/full; https://doaj.org/toc/1664-462X

Access URL: https://doaj.org/article/2e05c9e8d1144b7aa98efc0d795e5324

Metabolic profiling and transcriptome analysis provide insights into the accumulation of flavonoids in chayote fruit during storage

Authors: YuTing Pu, Cheng Wang, YongWen Jiang, XiaoJing Wang, YuJie Ai, WeiBing Zhuang

Source: Frontiers in Nutrition, Vol 10 (2023)

Subject Terms: Sechium edulel, metabolite profiling, transcriptome profiling, flavonoids, DEGs, Nutrition. Foods and food supply, TX341-641

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fnut.2023.1029745/full; https://doaj.org/toc/2296-861X

Access URL: https://doaj.org/article/c16994d7961e461a84b25dd2b56a998b

Cadmium-Tolerant Bacterium Strain Cdb8-1 Contributed to the Remediation of Cadmium Pollution through Increasing the Growth and Cadmium Uptake of Chinese Milk Vetch (Astragalus sinicus L.) in Cadmium-Polluted Soils

Authors: Bo Wang, Minghui Sun, Yuekai Wang, Tengyue Yan, Yuhang Li, Xinxin Wu, Youbao Wang, Weibing Zhuang

Source: Plants, Vol 13, Iss 1, p 76 (2023)

Subject Terms: antioxidant defense system, Bacillus nitratireducens, bioremediation of Cd-contaminated soils, Cd-tolerant bacterium strain Cdb8-1, Chinese milk vetch, Botany, QK1-989

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Relation: https://www.mdpi.com/2223-7747/13/1/76; https://doaj.org/toc/2223-7747

Access URL: https://doaj.org/article/292cfbe4d06e45fd949be666db01c88b

Genome-wide analysis and expression profiles of PdeMYB transcription factors in colored-leaf poplar (Populus deltoids)

Authors: Weibing Zhuang, Xiaochun Shu, Xinya Lu, Tao Wang, Fengjiao Zhang, Ning Wang, Zhong Wang

Source: BMC Plant Biology, Vol 21, Iss 1, Pp 1-16 (2021)

Subject Terms: Genome-wide, PdeMYB transcription factors, Populus deltoids, Expression profiles, Anthocyanin biosynthesis, Botany, QK1-989

File Description: electronic resource

Relation: https://doaj.org/toc/1471-2229

Access URL: https://doaj.org/article/4f52498e6e464b6384e9050db813ddd7

Effects of Seasonal Changes on Chlorophyll Fluorescence and Physiological Characteristics in the Two Taxus Species

Authors: Tao Wang, Lingyu Li, Yalong Qin, Bo Lu, Donghuan Xu, Weibing Zhuang, Xiaochun Shu, Fengjiao Zhang, Ning Wang, Zhong Wang

Source: Plants, Vol 12, Iss 14, p 2636 (2023)

Subject Terms: chlorophyll a transient, chlorophyll fluorescence imaging, photosynthetic response, seasonal dynamics, Taxus species, Botany, QK1-989

File Description: electronic resource

Relation: https://www.mdpi.com/2223-7747/12/14/2636; https://doaj.org/toc/2223-7747

Access URL: https://doaj.org/article/0859574f2aae44358bf12727bab26c6e

Transcriptome Analysis Reveals Differentially Expressed Genes Involved in Cadmium and Arsenic Accumulation in Tea Plant (Camellia sinensis)

Authors: Shiqi Liu, Xuqian Peng, Xiaojing Wang, Weibing Zhuang

Source: Plants, Vol 12, Iss 5, p 1182 (2023)

Subject Terms: transcriptome, Cd and As, tea plants, RNA-sequencing, WGCNA, Botany, QK1-989

File Description: electronic resource

Relation: https://www.mdpi.com/2223-7747/12/5/1182; https://doaj.org/toc/2223-7747

Access URL: https://doaj.org/article/416bc80375f64a769bf099e072191c05

Comparative Transcriptome Analysis Identifies Key Regulatory Genes Involved in Anthocyanin Metabolism During Flower Development in Lycoris radiata

Authors: Ning Wang, Xiaochun Shu, Fengjiao Zhang, Weibing Zhuang, Tao Wang, Zhong Wang

Source: Frontiers in Plant Science, Vol 12 (2021)

Subject Terms: Lycoris radiata, transcriptome, anthocyanin, structural genes, phytohormone, transcription factors, Plant culture, SB1-1110

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fpls.2021.761862/full; https://doaj.org/toc/1664-462X

Access URL: https://doaj.org/article/48fef5ccffa44accaece45b37910710f

Transcriptomic analysis of interstock-induced dwarfism in Sweet Persimmon (Diospyros kaki Thunb.)

Authors: Yanying Shen, Weibing Zhuang, Xutong Tu, Zhihong Gao, Aisheng Xiong, Xinyi Yu, Xuehan Li, Feihong Li, Shenchun Qu

Source: Horticulture Research, Vol 6, Iss 1, Pp 1-17 (2019)

Subject Terms: Botany, QK1-989, Plant culture, SB1-1110

File Description: electronic resource

Relation: https://doaj.org/toc/2052-7276

Access URL: https://doaj.org/article/5d64f87d41cc42d884c4efaac1c8da9f

Overexpression of MzASMT 1, a Gene From Malus zumi Mats, Enhances Salt Tolerance in Transgenic Tobacco

Authors: Weibing Zhuang, Tianyu Liu, Xiaochun Shu, Hongxue Wang, Zhong Wang, Tao Wang, Fengjiao Zhang, Shenchun Qu

Source: Frontiers in Plant Science, Vol 11 (2020)

Subject Terms: melatonin, MzASMT 1, salt tolerance, ROS, antioxidant enzyme system, Plant culture, SB1-1110

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fpls.2020.561903/full; https://doaj.org/toc/1664-462X

Access URL: https://doaj.org/article/3f08130e28d746e5866c1b68cf9d3c98

Ornamental Poplar ‘Zhongshancaiyun’

Authors: Weibing Zhuang, Xiaochun Shu, Xinya Lu, Tao Wang, Fengjiao Zhang, Ning Wang, Zhong Wang

Source: HortScience, Vol 56, Iss 10, Pp 1291-1292 (2021)

Subject Terms: colored leaf, natural mutant, new cultivar, populus deltoides, Plant culture, SB1-1110

File Description: electronic resource

Relation: https://journals.ashs.org/hortsci/view/journals/hortsci/56/10/article-p1291.xml; https://doaj.org/toc/2327-9834

Access URL: https://doaj.org/article/ba5cd804f90e4093b1ab32da82d970fd

Complete chloroplast genome sequence and phylogenetic analysis of Populus deltoides Caihong

Authors: Weibing Zhuang, Xiaochun Shu, Hui Zhang, Tao Wang, Fengjiao Zhang, Ning Wang, Zhong Wang

Source: Mitochondrial DNA. Part B. Resources, Vol 6, Iss 2, Pp 389-390 (2021)

Subject Terms: caihong poplar, populus deltoides, chloroplast genome, whole-genome sequencing, phylogenetic analysis, Genetics, QH426-470

File Description: electronic resource

Relation: https://doaj.org/toc/2380-2359

Access URL: https://doaj.org/article/1b1de7777cf04db0a6031afed117d478

Characterization of the complete chloroplast genome of Populus deltoides Zhonglin 2025

Authors: Weibing Zhuang, Xiaochun Shu, Ming Zhang, Tao Wang, Fengjiao Zhang, Ning Wang, Zhong Wang

Source: Mitochondrial DNA. Part B. Resources, Vol 5, Iss 3, Pp 3705-3706 (2020)

Subject Terms: populus deltoides, chloroplast genome, whole-genome sequencing, phylogenetic analysis, Genetics, QH426-470

File Description: electronic resource

Relation: https://doaj.org/toc/2380-2359

Access URL: https://doaj.org/article/5cc8d62843424846a36aa7984ca3fc95

Comparative Chloroplast Genomes of Four Lycoris Species (Amaryllidaceae) Provides New Insight into Interspecific Relationship and Phylogeny

Authors: Fengjiao Zhang, Ning Wang, Guanghao Cheng, Xiaochun Shu, Tao Wang, Weibing Zhuang, Ruisen Lu, Zhong Wang

Source: Biology, Vol 10, Iss 8, p 715 (2021)

Subject Terms: Lycoris, Amaryllidaceae, chloroplast genome, interspecific comparison, phylogenetic analysis, Biology (General), QH301-705.5

File Description: electronic resource

Relation: https://www.mdpi.com/2079-7737/10/8/715; https://doaj.org/toc/2079-7737

Access URL: https://doaj.org/article/3f217e8b524f417b81e02104e0c066d9

Recent Research Progress in Taxol Biosynthetic Pathway and Acylation Reactions Mediated by Taxus Acyltransferases

Authors: Tao Wang, Lingyu Li, Weibing Zhuang, Fengjiao Zhang, Xiaochun Shu, Ning Wang, Zhong Wang

Source: Molecules, Vol 26, Iss 10, p 2855 (2021)

Subject Terms: taxol, biosynthetic pathway, acylation reaction, acyltransferase, latest research progress, Organic chemistry, QD241-441

File Description: electronic resource

Relation: https://www.mdpi.com/1420-3049/26/10/2855; https://doaj.org/toc/1420-3049

Access URL: https://doaj.org/article/14f2c6f2070e4896a55ac22c9f08c86c

Transcriptome Sequencing Reveals Regulatory Mechanisms of Taxol Synthesis in Taxus wallichiana var. Mairei

Authors: Tao Wang, Yiming Chen, Weibing Zhuang, Fengjiao Zhang, Xiaochun Shu, Zhong Wang, Qing Yang

Source: International Journal of Genomics, Vol 2019 (2019)

Subject Terms: Genetics, QH426-470

File Description: electronic resource

Relation: https://doaj.org/toc/2314-436X; https://doaj.org/toc/2314-4378

Access URL: https://doaj.org/article/df8967cf634e40b38bb2f1d9a151c2ac

The complete chloroplast genome sequence of Lycoris radiata

Authors: Fengjiao Zhang, Xiaochun Shu, Tao Wang, Weibing Zhuang, Zhong Wang

Source: Mitochondrial DNA. Part B. Resources, Vol 4, Iss 2, Pp 2886-2887 (2019)

Subject Terms: lycoris radiata, chloroplast genome, phylogenetic analysis, Genetics, QH426-470

File Description: electronic resource

Relation: https://doaj.org/toc/2380-2359

Access URL: https://doaj.org/article/e013a0499f9544dbb0b5327d1b78071e

Complete chloroplast genome of Lycoris sprengeri (Amaryllidaceae) and genetic comparison

Authors: Fengjiao Zhang, Weibing Zhuang, Xiaochun Shu, Tao Wang, Zhong Wang

Source: Mitochondrial DNA. Part B. Resources, Vol 4, Iss 2, Pp 3577-3578 (2019)

Subject Terms: lycoris sprengeri, complete chloroplast genome, genetic comparison, Genetics, QH426-470

File Description: electronic resource

Relation: https://doaj.org/toc/2380-2359

Access URL: https://doaj.org/article/8ad417d50f9e4850bf83ece87717504a