Quantitative Explainability Study of Deformable Convolutional Neural Networks using Chest X-rays

Authors: Chundru, Vivek K., Sait Kilinc, M., Lim, Anthony, Nnamdi, Micky C., Zhong, Yishan, Shi, Wenqi, Wang, May D.

Source: 2024 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) Bioinformatics and Biomedicine (BIBM), 2024 IEEE International Conference on. :5908-5913 Dec, 2024

Relation: 2024 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)

Interpretable Survival Risk Prediction for High-Grade Glioma Patients via Radiomic Features from Peritumoral Region

Authors: Dhamdhere, Rohan, Bharadwaj, Satvika, Aggarwal, Arpit, Mutha, Pushkar, Shi, Wenqi, Marteau, Benoit, Madabhushi, Anant, Wang, May D.

Source: 2024 46th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC) Engineering in Medicine and Biology Society (EMBC), 2024 46th Annual International Conference of the IEEE. :1-5 Jul, 2024

Relation: 2024 46th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC)

Predicting Cardiovascular Disease Risk in Tobacco Users Using Machine Learning Algorithms

Authors: Khimani, Asma, Hornback, Andrew, Jain, Neha, Avula, Pavithra, Jaishankar, Anirudh, Wang, May D.

Source: 2024 46th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC) Engineering in Medicine and Biology Society (EMBC), 2024 46th Annual International Conference of the IEEE. :1-5 Jul, 2024

Relation: 2024 46th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC)

Identifying Features for Keloid Scars Subtyping Using K-Modes Clustering

Authors: Jaishankar, Anirudh, Jain, Neha, Hornback, Andrew, Khimani, Asma, Avula, Pavithra, Wang, May D.

Source: 2024 46th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC) Engineering in Medicine and Biology Society (EMBC), 2024 46th Annual International Conference of the IEEE. :1-6 Jul, 2024

Relation: 2024 46th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC)

Are gene-by-environment interactions leveraged in multi-modality neural networks for breast cancer prediction?

Authors: Isgut, Monica, Hornback, Andrew, Luo, Yunan, Khimani, Asma, Jain, Neha, Wang, May D.

Subject Terms: Quantitative Biology - Genomics

Access URL: http://arxiv.org/abs/2407.20978

Multi-Modal Deep Feature Integration for Alzheimer's Disease Staging

Authors: Singh, Amritpal, Shi, Wenqi, Wang, May D.

Source: 2023 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) Bioinformatics and Biomedicine (BIBM), 2023 IEEE International Conference on. :1-6 Dec, 2023

Relation: 2023 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)

Effective Surrogate Models for Docking Scores Prediction of Candidate Drug Molecules on SARS-CoV-2 Protein Targets

Authors: Shi, Wenqi, Murakoso, Mio, Guo, Xiaoyan, Xiong, Linxi, Chen, Matthew, Wang, May D.

Source: 2023 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) Bioinformatics and Biomedicine (BIBM), 2023 IEEE International Conference on. :4235-4242 Dec, 2023

Relation: 2023 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)

Identification of Single-Cell RNA Sequencing Molecular Signatures for COVID-19 Infection Severity Classification

Authors: Li, Xinling, Zhang, Cheng, Chen, Wei-An, Shi, Wenqi, Wang, May D.

Source: 2023 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) Bioinformatics and Biomedicine (BIBM), 2023 IEEE International Conference on. :2044-2047 Dec, 2023

Relation: 2023 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)

Latent Topic Extraction as a Source of Labeling in Natural Language Processing

Authors: Hornback, Andrew, Zhu, Yuanda, Isgut, Monica, Shi, Wenqi, Nema, Arjita, Anderson, Blake, Wang, May D.

Source: 2023 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) Bioinformatics and Biomedicine (BIBM), 2023 IEEE International Conference on. :4312-4319 Dec, 2023

Relation: 2023 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)

Uncertainty-Aware Ensemble Learning Models for Out-of-Distribution Medical Imaging Analysis

Authors: Tamo, J. Ben, Nnamdi, Micky C., Lesbats, Lea, Shi, Wenqi, Zhong, Yishan, Wang, May D.

Source: 2023 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) Bioinformatics and Biomedicine (BIBM), 2023 IEEE International Conference on. :4243-4250 Dec, 2023

Relation: 2023 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)

Development of Interpretable Machine Learning Models for COVID-19 Drug Target Docking Scores Prediction

Authors: Shi, Wenqi, Murakoso, Mio, Guo, Xiaoyan, Wang, May D.

Source: 2023 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) Bioinformatics and Biomedicine (BIBM), 2023 IEEE International Conference on. :4124-4131 Dec, 2023

Relation: 2023 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)

Personalized COVID-19 Early Detection Using Wearable Data Based on Self-Reported Records

Authors: Ding, Cheng, Lin, David, Lei, Zewei, Myers, Jayden, Shi, Wenqi, Marteau, Benoit, Wang, May D.

Source: 2023 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) Bioinformatics and Biomedicine (BIBM), 2023 IEEE International Conference on. :3348-3353 Dec, 2023

Relation: 2023 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)

Rare Heart Transplant Rejection Classification Using Diffusion-Based Synthetic Image Augmentation

Authors: Bao, Han, Deng, Jie, Xing, Shihao, Zhong, Yishan, Shi, Wenqi, Marteau, Benoit, Das, Bibhuti, Shehata, Bahig, Deshpande, Shriprasad, Wang, May D.

Source: 2023 IEEE EMBS International Conference on Biomedical and Health Informatics (BHI) Biomedical and Health Informatics (BHI), 2023 IEEE EMBS International Conference on. :1-4 Oct, 2023

Relation: 2023 IEEE EMBS International Conference on Biomedical and Health Informatics (BHI)

Concept Bottleneck Model for Adolescent Idiopathic Scoliosis Patient Reported Outcomes Prediction

Authors: Nnamdi, Micky C., Shi, Wenqi, Tamo, J. Ben, Iwinski, Henry J., Wattenbarger, J. Michael, Wang, May D.

Source: 2023 IEEE EMBS International Conference on Biomedical and Health Informatics (BHI) Biomedical and Health Informatics (BHI), 2023 IEEE EMBS International Conference on. :1-4 Oct, 2023

Relation: 2023 IEEE EMBS International Conference on Biomedical and Health Informatics (BHI)

Automated Seizure Detection using Transformer Models on Multi-Channel EEGs

Authors: Zhu, Yuanda, Wang, May D.

Source: 2023 IEEE EMBS International Conference on Biomedical and Health Informatics (BHI) Biomedical and Health Informatics (BHI), 2023 IEEE EMBS International Conference on. :1-6 Oct, 2023

Relation: 2023 IEEE EMBS International Conference on Biomedical and Health Informatics (BHI)

MedAdapter: Efficient Test-Time Adaptation of Large Language Models towards Medical Reasoning

Authors: Shi, Wenqi, Xu, Ran, Zhuang, Yuchen, Yu, Yue, Sun, Haotian, Wu, Hang, Yang, Carl, Wang, May D.

Subject Terms: Computer Science - Computation and Language, Computer Science - Artificial Intelligence

Access URL: http://arxiv.org/abs/2405.03000

BMRetriever: Tuning Large Language Models as Better Biomedical Text Retrievers

Authors: Xu, Ran, Shi, Wenqi, Yu, Yue, Zhuang, Yuchen, Zhu, Yanqiao, Wang, May D., Ho, Joyce C., Zhang, Chao, Yang, Carl

Source: EMNLP 2024

Subject Terms: Computer Science - Computation and Language, Computer Science - Artificial Intelligence, Computer Science - Information Retrieval, Quantitative Biology - Quantitative Methods

Access URL: http://arxiv.org/abs/2404.18443

RAM-EHR: Retrieval Augmentation Meets Clinical Predictions on Electronic Health Records

Authors: Xu, Ran, Shi, Wenqi, Yu, Yue, Zhuang, Yuchen, Jin, Bowen, Wang, May D., Ho, Joyce C., Yang, Carl

Source: ACL 2024

Subject Terms: Computer Science - Computation and Language, Computer Science - Artificial Intelligence, Computer Science - Information Retrieval, Quantitative Biology - Other Quantitative Biology

Access URL: http://arxiv.org/abs/2403.00815

EHRAgent: Code Empowers Large Language Models for Few-shot Complex Tabular Reasoning on Electronic Health Records

Authors: Shi, Wenqi, Xu, Ran, Zhuang, Yuchen, Yu, Yue, Zhang, Jieyu, Wu, Hang, Zhu, Yuanda, Ho, Joyce, Yang, Carl, Wang, May D.

Subject Terms: Computer Science - Computation and Language, Computer Science - Artificial Intelligence

Access URL: http://arxiv.org/abs/2401.07128

Development of Machine Learning Regression Model for COVID-19 Drug Target Prediction

Authors: Zamitalo, Alexandra, Xie, Qingtong, Allam, Mayar, Philip, Phinu, Shi, Wenqi, Giuste, Felipe, Marteau, Benoit, Murakoso, Mio, Wang, May D.

Source: 2022 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) Bioinformatics and Biomedicine (BIBM), 2022 IEEE International Conference on. :2808-2815 Dec, 2022

Relation: 2022 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)