Phocaeicola vulgatus shapes the long-term growth dynamics and evolutionary adaptations of Clostridioides difficile

Authors: Sulaiman, Jordy Evan ¹, Thompson, Jaron ², Cheung, Pak Lun Kevin ³, Qian, Yili ¹, Mill, Jericha ¹, James, Isabella ⁴, Im, Hanhyeok ⁵, Vivas, Eugenio I. ^{6, 7}, Simcox, Judith ⁸, Venturelli, Ophelia S. ^{1, 2, 5, 6, 9, 10, ∗}

Source: In Cell Host & Microbe 8 January 2025 33(1):42-58

A secondary metabolite drives intraspecies antagonism in a gut symbiont that is inhibited by cell-wall acetylation

Authors: Özçam, Mustafa, Oh, Jee-Hwan, Tocmo, Restituto, Acharya, Deepa, Zhang, Shenwei, Astmann, Theresa J., Heggen, Mark, Ruiz-Ramírez, Silvette, Li, Fuyong, Cheng, Christopher C., Vivas, Eugenio, Rey, Federico E., Claesen, Jan, Bugni, Tim S., Walter, Jens, van Pijkeren, Jan-Peter

Source: In Cell Host & Microbe 8 June 2022 30(6):824-835

Polysaccharide utilization loci in Bacteroides determine population fitness and community-level interactions

Authors: Feng, Jun, Qian, Yili, Zhou, Zhichao, Ertmer, Sarah, Vivas, Eugenio I., Lan, Freeman, Hamilton, Joshua J., Rey, Federico E., Anantharaman, Karthik, Venturelli, Ophelia S.

Source: In Cell Host & Microbe 9 February 2022 30(2):200-215

Differential Catabolism of an Anthocyanin-Rich Elderberry Extract by Three Gut Microbiota Bacterial Species

Authors: Bresciani, Letizia, Angelino, Donato, Vivas, Eugenio I., Kerby, Robert L., García-Viguera, Cristina, Del Rio, Daniele, Rey, Federico E., Mena, Pedro

Source: Journal of agricultural and food chemistry. 68(7):1837-1843

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCRN623761020&indx=1&recIds=ETOCRN623761020

Loss of Gut Microbiota Alters Immune System Composition and Cripples Postinfarction Cardiac Repair

Authors: Tang, Tony W.H., Chen, Hung-Chih, Chen, Chen-Yun, Yen, Christopher Y.T., Lin, Chen-Ju, Prajnamitra, Ray P., Chen, Li-Lun, Ruan, Shu-Chian, Lin, Jen-Hao, Lin, Po-Ju, Lu, Hsueh-Han, Kuo, Chiung-Wen, Chang, Cindy M., Hall, Alexander D., Vivas, Eugenio I., Shui, Jr-Wen, Chen, Peilin, Hacker, Timothy A., Rey, Federico E., Kamp, Timothy J., Hsieh, Patrick C.H.

Source: Circulation. 139(5):647-659

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100188861088.0x000001&indx=1&recIds=ETOCvdc_100188861088.0x000001

Metabolic, Epigenetic, and Transgenerational Effects of Gut Bacterial Choline Consumption

Authors: Romano, Kymberleigh A., Martinez-del Campo, Ana, Kasahara, Kazuyuki, Chittim, Carina L., Vivas, Eugenio I., Amador-Noguez, Daniel, Balskus, Emily P., Rey, Federico E.

Source: In Cell Host & Microbe 13 September 2017 22(3):279-290

Interactions between Roseburia intestinalis and diet modulate atherogenesis in a murine model

Authors: Kasahara, Kazuyuki, Krautkramer, Kimberly A., Org, Elin, Romano, Kymberleigh A., Kerby, Robert L., Vivas, Eugenio I., Mehrabian, Margarete, Denu, John M., Bäckhed, Fredrik, Lusis, Aldons J., Rey, Federico E.

Source: Nature microbiology. 3(12):1461-1471

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100130019165.0x000001&indx=1&recIds=ETOCvdc_100130019165.0x000001

Fecal Aliquot Straw Technique (FAST) allows for easy and reproducible subsampling: assessing interpersonal variation in trimethylamine-N-oxide (TMAO) accumulation

Authors: Romano, Kymberleigh, Dill-McFarland, Kimberly, Kasahara, Kazuyuki, Kerby, Robert, Vivas, Eugenio, Amador-Noguez, Daniel, Herd, Pamela, Rey, Federico

Source: Microbiome. 6(1):1-8

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100162773764.0x000001&indx=1&recIds=ETOCvdc_100162773764.0x000001

Gut microbiome responds to alteration in female sex hormone status and exacerbates metabolic dysfunction.

Authors: Cross, Tzu-Wen L., Simpson, Abigayle M. R., Ching-Yen Lin, Hottmann, Natasha M., Bhatt, Aadra P., Pellock, Samuel J., Nelson, Erik R., Loman, Brett R., Wallig, Matthew A., Vivas, Eugenio I., Suchodolski, Jan, Redinbo, Matthew R., Reyd, Federico E., Swanson, Kelly S.

Source: Gut Microbes; 2024, Vol. 16 Issue 1, p1-19, 19p

Host Genotype and Gut Microbiome Modulate Insulin Secretion and Diet-Induced Metabolic Phenotypes

Authors: Kreznar, Julia H., Keller, Mark P., Traeger, Lindsay L., Rabaglia, Mary E., Schueler, Kathryn L., Stapleton, Donald S., Zhao, Wen, Vivas, Eugenio I., Yandell, Brian S., Broman, Aimee Teo, Hagenbuch, Bruno, Attie, Alan D., Rey, Federico E.

Source: Cell reports. 18(7):1739-1750

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100042383720.0x000001&indx=1&recIds=ETOCvdc_100042383720.0x000001

Diet-Microbiota Interactions Mediate Global Epigenetic Programming in Multiple Host Tissues

Authors: Krautkramer, Kimberly A., Kreznar, Julia H., Romano, Kymberleigh A., Vivas, Eugenio I., Barrett-Wilt, Gregory A., Rabaglia, Mary E., Keller, Mark P., Attie, Alan D., Rey, Federico E., Denu, John M.

Source: Molecular cell. 64(5):982-992

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100065777834.0x000001&indx=1&recIds=ETOCvdc_100065777834.0x000001

Dissecting the impact of dietary fiber type on atherosclerosis in mice colonized with different gut microbial communities.

Authors: Hutchison, Evan R., Kasahara, Kazuyuki, Zhang, Qijun, Vivas, Eugenio I., Cross, Tzu-Wen L., Rey, Federico E.

Source: NPJ Biofilms & Microbiomes; 6/3/2023, Vol. 9 Issue 1, p1-12, 12p

Posttranslational Modifications in Microcin B17 Define an Additional Class of DNA Gyrase Inhibitor

Authors: Yorgey, Peter, Lee, Jonathan, Kordel, Johann, Vivas, Eugenio, Warner, Philip, Jebaratnam, David, Kolter, Roberto

Source: Proceedings of the National Academy of Sciences of the United States of America, 1994 May 01. 91(10), 4519-4523.

Access URL: https://www.jstor.org/stable/2364688

The Rhodanese Domain of ThiI Is Both Necessary and Sufficient for Synthesis of the Thiazole Moiety of Thiamine in Salmonella enterica.

Authors: Martinez-Gomez, N. Cecilia, Palmer, Lauren D., Vivas, Eugenio

Source: Journal of Bacteriology; September 15 2011, Vol. 193 Issue 18, p4582-4587, 6p

Isolation and Characterization of Xenorhabdus nematophila Transposon Insertion Mutants Defective in Lipase Activity against Tween.

Authors: Richards, Gregory R., Vivas, Eugenio I., Andersen, Aaron W.

Source: Journal of Bacteriology; August 2009, Vol. 191 Issue 16, p5325-5331, 7p

Xenorhabdus nematophilus as a model for host-bacterium interactions: rpoS is necessary for mutualism with nematodes.

Authors: Vivas, Eugenio I., Goodrich-Blair, Heidi

Source: Journal of Bacteriology; August 2001, Vol. 183 Issue 16, p4687-4693, 7p

MurA (MurZ), the enzyme that catalyzes the first committed step in peptidoglycan biosynthesis, is essential in Escherichia coli.

Authors: Brown, Eric D., Vivas, Eugenio I., Walsh, Christopher T.

Source: Journal of Bacteriology; July 1995, Vol. 177 Issue 14, p4194-4197, 4p

Gut microbiome variation modulates the effects of dietary fiber on host metabolism.

Authors: Murga-Garrido, Sofia M., Hong, Qilin, Cross, Tzu-Wen L., Hutchison, Evan R., Han, Jessica, Thomas, Sydney P., Vivas, Eugenio I., Denu, John, Ceschin, Danilo G., Tang, Zheng-Zheng, Rey, Federico E.

Source: Microbiome; 5/20/2021, Vol. 9 Issue 1, p1-26, 26p

Subject Terms: GUT microbiome, DIETARY fiber, METABOLITES, AMINO acids, PHENOTYPES

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