Maize specialized metabolome networks reveal organ-preferential mixed glycosides

Authors: Desmet, Sandrien, Saeys, Yvan, Verstaen, Kevin, Dauwe, Rebecca, Kim, Hoon, Niculaes, Claudiu, Fukushima, Atsushi, Goeminne, Geert, Vanholme, Ruben, Ralph, John, Boerjan, Wout, Morreel, Kris

Source: In Computational and Structural Biotechnology Journal 2021 19:1127-1144

TCR transgenic clone selection guided by immune receptor analysis and single-cell RNA expression of polyclonal responders.

Authors: Debeuf, Nincy, Lameire, Sahine, Vanheerswynghels, Manon, Deckers, Julie, De Wolf, Caroline, Toussaint, Wendy, Verbeke, Rein, Verstaen, Kevin, Hammad, Hamida, Vanhee, Stijn, Lambrecht, Bart N.

Source: eLife; 12/30/2024, p1-17, 17p

A single-cell transcriptomic map of the murine and human multiple myeloma immune microenvironment across disease stages.

Authors: Verheye, Emma, Kancheva, Daliya, Satilmis, Hatice, Vandewalle, Niels, Fan, Rong, Bardet, Pauline M. R., Clappaert, Emile J., Verstaen, Kevin, De Becker, Ann, Vanderkerken, Karin, De Veirman, Kim, Laoui, Damya

Source: Journal of Hematology & Oncology; 11/7/2024, Vol. 17 Issue 1, p1-22, 22p

Subject Terms: DISEASE relapse, BONE marrow, MULTIPLE myeloma, DISEASE progression, DENDRITIC cells

A redundant transcription factor network steers spatiotemporal Arabidopsis triterpene synthesis.

Authors: Nguyen, Trang Hieu, Thiers, Louis, Van Moerkercke, Alex, Bai, Yuechen, Fernández-Calvo, Patricia, Minne, Max, Depuydt, Thomas, Colinas, Maite, Verstaen, Kevin, Van Isterdael, Gert, Nützmann, Hans-Wilhelm, Osbourn, Anne, Saeys, Yvan, De Rybel, Bert, Vandepoele, Klaas, Ritter, Andrés, Goossens, Alain

Source: Nature Plants; Jun2023, Vol. 9 Issue 6, p926-937, 12p

TIM3^+ TRBV11-2 T cells and IFNγ signature in patrolling monocytes and CD16^+ NK cells delineate MIS-C

Authors: Hoste, Levi, Roels, Lisa, Naesens, Leslie, Bosteels, Victor, Vanhee, Stijn, Dupont, Sam, Bosteels, Cedric, Browaeys, Robin, Vandamme, Niels, Verstaen, Kevin

Source: Journal of experimental medicine. 219(2):e20211381-e20211381

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCRN628591100&indx=1&recIds=ETOCRN628591100

A redundant transcription factor network steers spatiotemporal Arabidopsistriterpene synthesis

Authors: Nguyen, Trang Hieu, Thiers, Louis, Van Moerkercke, Alex, Bai, Yuechen, Fernández-Calvo, Patricia, Minne, Max, Depuydt, Thomas, Colinas, Maite, Verstaen, Kevin, Van Isterdael, Gert, Nützmann, Hans-Wilhelm, Osbourn, Anne, Saeys, Yvan, De Rybel, Bert, Vandepoele, Klaas, Ritter, Andrés, Goossens, Alain

Source: Nature Plants; 20230101, Issue: Preprints p1-12, 12p

Comparative analysis of antibody- and lipid-based multiplexing methods for single-cell RNA-seq.

Authors: Mylka, Viacheslav, Matetovici, Irina, Poovathingal, Suresh, Aerts, Jeroen, Vandamme, Niels, Seurinck, Ruth, Verstaen, Kevin, Hulselmans, Gert, Van den Hoecke, Silvie, Scheyltjens, Isabelle, Movahedi, Kiavash, Wils, Hans, Reumers, Joke, Van Houdt, Jeroen, Aerts, Stein, Saeys, Yvan

Source: Genome Biology; 2/16/2022, Vol. 23 Issue 1, p1-21, 21p

Non-cell autonomous and spatiotemporal signalling from a tissue organizer orchestrates root vascular development.

Authors: Yang, BaoJun, Minne, Max, Brunoni, Federica, Plačková, Lenka, Petřík, Ivan, Sun, Yanbiao, Nolf, Jonah, Smet, Wouter, Verstaen, Kevin, Wendrich, Jos R., Eekhout, Thomas, Hoyerová, Klára, Van Isterdael, Gert, Haustraete, Jurgen, Bishopp, Anthony, Farcot, Etienne, Novák, Ondřej, Saeys, Yvan, De Rybel, Bert

Source: Nature Plants; Nov2021, Vol. 7 Issue 11, p1485-1494, 10p

OTULIN maintains skin homeostasis by controlling keratinocyte death and stem cell identity.

Authors: Hoste, Esther, Lecomte, Kim, Annusver, Karl, Vandamme, Niels, Roels, Jana, Maschalidi, Sophia, Verboom, Lien, Vikkula, Hanna-Kaisa, Sze, Mozes, Van Hove, Lisette, Verstaen, Kevin, Martens, Arne, Hochepied, Tino, Saeys, Yvan, Ravichandran, Kodi, Kasper, Maria, van Loo, Geert

Source: Nature Communications; 10/8/2021, Vol. 12 Issue 1, p1-16, 16p

Subject Terms: KERATINOCYTES, STEM cells, HOMEOSTASIS, CELL death, SKIN inflammation, LABORATORY mice

Cell-by-cell dissection of phloem development links a maturation gradient to cell specialization.

Authors: Roszak, Pawel, Jung-ok Heo, Blob, Bernhard, Koichi Toyokura, Yuki Sugiyama, Angels de Luis Balaguer, Maria, Lau, Winnie W. Y., Hamey, Fiona, Cirrone, Jacopo, Madej, Ewelina, Bouatta, Alida M., Xin Wang, Guichard, Marjorie, Ursache, Robertas, Tavares, Hugo, Verstaen, Kevin, Wendrich, Jos, Melnyk, Charles W., Yoshihisa Oda, Shasha, Dennis

Source: Science; 12/24/2021, Vol. 374 Issue 6575, p1577-1577, 1p, 1 Diagram

Vascular transcription factors guide plant epidermal responses to limiting phosphate conditions.

Authors: Wendrich, Jos R., Bao Jun Yang, Vandamme, Niels, Verstaen, Kevin, Smet, Wouter, Van de Velde, Celien, Minne, Max, Wybouw, Brecht, Mor, Eliana, Arents, Helena E., Nolf, Jonah, Van Duyse, Julie, Van Isterdael, Gert, Maere, Steven, Saeys, Yvan, yvan.saeys@irc.vib-ugent.be, De Rybel, Bert, beryb@psb.vib-ugent.be

Source: Science; 11/13/2020, Vol. 370 Issue 6518, p810-810, 1p, 1 Diagram