High conservation of the dental plaque microbiome across populations with differing subsistence strategies and levels of market integration

Authors: Velsko, Irina M., Gallois, Sandrine, Stahl, Raphaela, Henry, Amanda G., Warinner, Christina

Source: Molecular ecology. 32(14):3872-3891

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100187164650.0x000001&indx=1&recIds=ETOCvdc_100187164650.0x000001

REPLY TO BEN-DOR ET AL. : Oral bacteria of Neanderthals and modern humans exhibit evidence of starch adaptation

Authors: Warinner, Christina, Velsko, Irina M., Yates, James A. Fellows

Source: Proceedings of the National Academy of Sciences of the United States of America, 2021 Sep . 118(37), 1-2.

Access URL: https://www.jstor.org/stable/27075683

Streptococcus abundance and oral site tropism in humans and non-human primates reflects host and lifestyle differences.

Authors: Velsko, Irina M., Warinner, Christina

Source: NPJ Biofilms & Microbiomes; 1/17/2025, Vol. 11 Issue 1, p1-13, 13p

The evolution and changing ecology of the African hominid oral microbiome

Authors: Yates, James A. Fellows, Velsko, Irina M., Aron, Franziska, Posth, Cosimo, Hofman, Courtney A., Austin, Rita M., Parker, Cody E., Mann, Allison E., Nägele, Kathrin, Arthur, Kathryn Weedman, Arthur, John W., Bauer, Catherine C., Crevecoeur, Isabelle, Cupillard, Christophe, Curtis, Matthew C., Dalén, Love, Bonilla, Marta Díaz-Zorita, Fernández-Lomana, J. Carlos Díez, Drucker, Dorothée G., Escrivá, Elena Escribano, Francken, Michael, Gibbon, Victoria E., Morales, Manuel R. González, Mateu, Ana Grande, Harvati, Katerina, Henry, Amanda G., Humphrey, Louise, Menéndez, Mario, Mihailovic, Dušan, Peresani, Marco, Morodera, Sofía Rodríguez, Roksandic, Mirjana, Rougier, Hélène, Sázelová, Sandra, Stock, Jay T., Straus, Lawrence Guy, Svoboda, Jiří, Teßmann, Barbara, Walker, Michael J., Power, Robert C., Lewis, Cecil M., Sankaranarayanan, Krithivasan, Guschanski, Katerina, Wrangham, Richard W., Dewhirst, Floyd E., Salazar-García, Domingo C., Krause, Johannes, Herbig, Alexander, Warinner, Christina

Source: Proceedings of the National Academy of Sciences of the United States of America, 2021 May . 118(20), 1-11.

Access URL: https://www.jstor.org/stable/27040410

Exploring the potential of dental calculus to shed light on past human migrations in Oceania.

Authors: Velsko, Irina M., Fagernäs, Zandra, Tromp, Monica, Bedford, Stuart, Buckley, Hallie R., Clark, Geoffrey, Dudgeon, John, Flexner, James, Galipaud, Jean-Christophe, Kinaston, Rebecca, Lewis Jr, Cecil M., Matisoo-Smith, Elizabeth, Nägele, Kathrin, Ozga, Andrew T., Posth, Cosimo, Rohrlach, Adam B., Shing, Richard, Simanjuntak, Truman, Spriggs, Matthew, Tamarii, Anatauarii

Source: Nature Communications; 11/24/2024, Vol. 15 Issue 1, p1-17, 17p

Subject Terms: HUMAN migration patterns, DENTAL calculus, HUMAN migrations, FOSSIL DNA, HUMAN DNA

Proteomic evidence of dietary sources in ancient dental calculus

Authors: Hendy, Jessica, Warinner, Christina, Bouwman, Abigail, Collins, Matthew J., Fiddyment, Sarah, Fischer, Roman, Hagan, Richard, Hofman, Courtney A., Holst, Malin, Chaves, Eros, Klaus, Lauren, Larson, Greger, Mackie, Meaghan, McGrath, Krista, Mundorff, Amy Z., Radini, Anita, Rao, Huiyun, Trachsel, Christian, Velsko, Irina M., Speller, Camilla F.

Source: Proceedings: Biological Sciences, 2018 Jul . 285(1883), 1-10.

Access URL: https://www.jstor.org/stable/26544912

Understanding the microbial biogeography of ancient human dentitions to guide study design and interpretation

Authors: Fagernäs, Zandra, Salazar-García, Domingo C, Haber Uriarte, María, Avilés Fernández, Azucena, Henry, Amanda G, Lomba Maurandi, Joaquín, Ozga, Andrew T, Velsko, Irina M, Warinner, Christina

Source: FEMS microbes. 3

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100163721259.0x000001&indx=1&recIds=ETOCvdc_100163721259.0x000001

Community-curated and standardised metadata of published ancient metagenomic samples with AncientMetagenomeDir

Authors: Fellows Yates, James A., Andrades Valtueña, Aida, Vågene, Åshild J., Cribdon, Becky, Velsko, Irina M., Borry, Maxime, Bravo-Lopez, Miriam J., Fernandez-Guerra, Antonio, Green, Eleanor J., Ramachandran, Shreya L., Heintzman, Peter D., Spyrou, Maria A., Hübner, Alexander, Gancz, Abigail S., Hider, Jessica, Allshouse, Aurora F., Zaro, Valentina, Warinner, Christina

Source: Scientific data. 8(1)

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100193175470.0x000001&indx=1&recIds=ETOCvdc_100193175470.0x000001

Grade C molar-incisor pattern periodontitis subgingival microbial profile before and after treatment.

Authors: Velsko, Irina M.¹ (AUTHOR), Harrison, Peter^2,3 (AUTHOR), Chalmers, Natalia⁴ (AUTHOR), Barb, Jennifer⁵ (AUTHOR), Huang, Hong² (AUTHOR), Aukhil, Ikramuddin² (AUTHOR), Shaddox, Luciana^2,6 (AUTHOR) lshaddox@uky.edu

Source: Journal of Oral Microbiology. Dec2020, Vol. 12 Issue 1, p1-9. 9p.

Subject Terms: *GINGIVA, *ACTINOBACILLUS actinomycetemcomitans, *PORPHYROMONAS gingivalis, *EUBACTERIALES, *AGGRESSIVE periodontitis, *RECORDING & registration, *ANTIBIOTICS, *PERIODONTITIS

Periodontitis in Rats Induces Systemic Oxidative Stress That Is Controlled by Bone-Targeted Antiresorptives

Authors: Oktay, Sehkar, Chukkapalli, Sasanka S., Rivera-Kweh, Mercedes F., Velsko, Irina M., Holliday, L. Shannon, Kesavalu, Lakshmyya

Source: Journal of periodontology. 86(1):137-145

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCRN600437810&indx=1&recIds=ETOCRN600437810

Microbial differences between dental plaque and historic dental calculus are related to oral biofilm maturation stage

Authors: Velsko, Irina M., Fellows Yates, James A., Aron, Franziska, Hagan, Richard W., Frantz, Laurent A. F., Loe, Louise, Martinez, Juan Bautista Rodriguez, Chaves, Eros, Gosden, Chris, Larson, Greger, Warinner, Christina

Source: Microbiome. 7(1)

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100129411394.0x000001&indx=1&recIds=ETOCvdc_100129411394.0x000001

Natural products from reconstructed bacterial genomes of the Middle and Upper Paleolithic.

Authors: Klapper, Martin¹, Hübner, Alexander^2,3, Ibrahim, Anan¹, Wasmuth, Ina¹, Borry, Maxime², Haensch, Veit G.⁴, Shuaibing Zhang¹, Al-Jammal, Walid K.⁵, Suma, Harikumar¹, Yates, James A. Fellows^1,2,3, Frangenberg, Jasmin¹, Velsko, Irina M.², Chowdhury, Somak¹, Herbst, Rosa¹, Bratovanov, Evgeni V.⁴, Dahse, Hans-Martin⁶, Horch, Therese⁴, Hertweck, Christian^4,7, González Morales, Manuel Ramon⁸, Guy Straus, Lawrence^9,10

Source: Science; 5/12/2023, Vol. 380 Issue 6645, p619-624, 6p, 3 Color Photographs

Consistent and reproducible long-term in vitro growth of health and disease-associated oral subgingival biofilms

Authors: Velsko, Irina M., Shaddox, Luciana M.

Source: BMC microbiology. 18(1)

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100127146320.0x000001&indx=1&recIds=ETOCvdc_100127146320.0x000001

HAYSTAC: A Bayesian framework for robust and rapid species identification in high-throughput sequencing data.

Authors: Dimopoulos, Evangelos A., Carmagnini, Alberto, Velsko, Irina M., Warinner, Christina, Larson, Greger, Frantz, Laurent A. F., Irving-Pease, Evan K.

Source: PLoS Computational Biology; 9/30/2022, Vol. 18 Issue 9, p1-30, 30p, 2 Charts, 9 Graphs

Subject Terms: NUCLEOTIDE sequencing, FOSSIL DNA, SPECIES, METAGENOMICS, IDENTIFICATION, DNA damage

Polymicrobial Oral Infection with Four Periodontal Bacteria Orchestrates a Distinct Inflammatory Response and Atherosclerosis in ApoE^null Mice.

Authors: Chukkapalli, Sasanka S.¹, Velsko, Irina M.¹, Rivera-Kweh, Mercedes F.¹, Zheng, Donghang², Lucas, Alexandra R.^2,3, Kesavalu, Lakshmyya^1,4 Kesavalu@dental.ufl.edu

Source: PLoS ONE. 11/30/2015, Vol. 10 Issue 11, p1-17. 17p.

Subject Terms: *ORAL diseases, *ATHEROSCLEROSIS, *APOPROTEINS, *LABORATORY mice, *PORPHYROMONAS gingivalis

Fusobacterium nucleatum Alters Atherosclerosis Risk Factors and Enhances Inflammatory Markers with an Atheroprotective Immune Response in ApoE^null Mice.

Authors: Velsko, Irina M.¹, Chukkapalli, Sasanka S.¹, Rivera-Kweh, Mercedes. F.¹, Chen, Hao², Zheng, Donghang², Bhattacharyya, Indraneel³, Gangula, Pandu R.^4,5, Lucas, Alexandra R.², Kesavalu, Lakshmyya^1,6 Kesavalu@dental.ufl.edu

Source: PLoS ONE. Jun2015, Vol. 10 Issue 6, p1-19. 19p.

Subject Terms: *FUSOBACTERIUM, *IMMUNE response, *LABORATORY mice, *PERIODONTAL disease, *CD3 antigen

Ancient Metagenomic Studies: Considerations for the Wider Scientific Community.

Authors: Sarkissian, Clio Der, Velsko, Irina M., Fotakis, Anna K., Vågene, Åshild J., Hübner, Alexander, Fellows Yates, James A.

Source: MSystems; Dec2021, Vol. 6 Issue 6, p1-12, 12p

Active Invasion of Oral and Aortic Tissues by Porphyromonas gingivalis in Mice Causally Links Periodontitis and Atherosclerosis.

Authors: Velsko, Irina M.¹, Chukkapalli, Sasanka S.¹, Rivera, Mercedes F.¹, Lee, Ju-Youn², Chen, Hao³, Zheng, Donghang³, Bhattacharyya, Indraneel⁴, Gangula, Pandu R.⁵, Lucas, Alexandra R.³, Kesavalu, Lakshmyya^1,6 Kesavalu@dental.ufl.edu

Source: PLoS ONE. May2014, Vol. 9 Issue 5, p1-11. 11p.

Subject Terms: *PORPHYROMONAS gingivalis infections, *PERIODONTITIS, *ATHEROSCLEROSIS, *MYOCARDIAL infarction, *STROKE, *ETIOLOGY of diseases, *MICROBIAL invasiveness

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