Predicting splicing patterns from the transcription factor binding sites in the promoter with deep learning

Authors: Tzu-Chieh Lin, Cheng-Hung Tsai, Cheng-Kai Shiau, Jia-Hsin Huang, Huai-Kuang Tsai

Source: BMC Genomics, Vol 25, Iss S3, Pp 1-16 (2024)

Subject Terms: Alternative splicing, TFBS, Deep learning, CNN, Transcriptional regulation, Biotechnology, TP248.13-248.65, Genetics, QH426-470

File Description: electronic resource

Relation: https://doaj.org/toc/1471-2164

Access URL: https://doaj.org/article/98ad9acef61a48188f47e2223ca9c95a

Comparative effectiveness and safety of escalating to triple therapy versus switching to dual bronchodilators after discontinuing LABA/ICS in patients with COPD: a retrospective cohort study

Authors: Li-Wei Wu, Tzu-Chieh Lin, Tzu-Han Lin, Ying-Jay Liou, Chen-Liang Tsai, Kuang-Yao Yang, Meng-Ting Wang

Source: Therapeutic Advances in Respiratory Disease, Vol 18 (2024)

Subject Terms: Diseases of the respiratory system, RC705-779

File Description: electronic resource

Relation: https://doaj.org/toc/1753-4666

Access URL: https://doaj.org/article/596f30e7d1b846dcaa2828dd819b1f1b

Genome and tissue-specific transcriptomes of the large-polyp coral, Fimbriaphyllia (Euphyllia) ancora: a recipe for a coral polyp

Authors: Shinya Shikina, Yuki Yoshioka, Yi-Ling Chiu, Taiga Uchida, Emma Chen, Yin-Chu Cheng, Tzu-Chieh Lin, Yu-Ling Chu, Miyuki Kanda, Mayumi Kawamitsu, Manabu Fujie, Takeshi Takeuchi, Yuna Zayasu, Noriyuki Satoh, Chuya Shinzato

Source: Communications Biology, Vol 7, Iss 1, Pp 1-14 (2024)

Subject Terms: Biology (General), QH301-705.5

File Description: electronic resource

Relation: https://doaj.org/toc/2399-3642

Access URL: https://doaj.org/article/5d1cb64384c5441d972c28877bbaa31a

The Potential for High-Priority Care Based on Pain Through Facial Expression Detection with Patients Experiencing Chest Pain

Authors: Hsiang Kao, Rita Wiryasaputra, Yo-Yun Liao, Yu-Tse Tsan, Wei-Min Chu, Yi-Hsuan Chen, Tzu-Chieh Lin, Chao-Tung Yang

Source: Diagnostics, Vol 15, Iss 1, p 17 (2024)

Subject Terms: cardiovascular disease, chest pain, deep learning, facial expression, expression recognition, YOLO, Medicine (General), R5-920

File Description: electronic resource

Relation: https://www.mdpi.com/2075-4418/15/1/17; https://doaj.org/toc/2075-4418

Access URL: https://doaj.org/article/523e68a733aa47b0b57a7cd8605c56ea

An Energy Modulation Interrogation Technique for Monitoring the Adhesive Joint Integrity Using the Full Spectral Response of Fiber Bragg Grating Sensors

Authors: Chow-Shing Shin, Tzu-Chieh Lin, Shun-Hsuan Huang

Source: Sensors, Vol 25, Iss 1, p 36 (2024)

Subject Terms: adhesive joint, integrity monitoring, fiber Bragg grating, tensile damage, full spectral response, energy modulation interrogation, Chemical technology, TP1-1185

File Description: electronic resource

Relation: https://www.mdpi.com/1424-8220/25/1/36; https://doaj.org/toc/1424-8220

Access URL: https://doaj.org/article/aa410bd7071a404d9cc6d37d23ca6b5c

Paper-based molecularly imprinted film designs for sensing human serum albumin

Authors: Tzu-Chieh Lin, Chung-Yin Lin, Yi-Ting Hwang, Dar-Fu Tai

Source: Talanta Open, Vol 11, Iss , Pp 100421- (2025)

Subject Terms: Human serum albumin, Molecularly imprinted films, Random coil, α-Helix, Conformation, Cellulose filter paper, Analytical chemistry, QD71-142

File Description: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S2666831925000244; https://doaj.org/toc/2666-8319

Access URL: https://doaj.org/article/cdd768391ce04ea0928960cdc7f309ff

Long-term administration of Western diet induced metabolic syndrome in mice and causes cardiac microvascular dysfunction, cardiomyocyte mitochondrial damage, and cardiac remodeling involving caveolae and caveolin-1 expression

Authors: I.-Fan Liu, Tzu-Chieh Lin, Shu-Chi Wang, Chia-Hung Yen, Chia-Yang Li, Hsuan-Fu Kuo, Chong-Chao Hsieh, Chia-Yuan Chang, Chuang-Rung Chang, Yung-Hsiang Chen, Yu-Ru Liu, Tsung-Ying Lee, Chi-Yuan Huang, Chih-Hsin Hsu, Shing-Jong Lin, Po-Len Liu

Source: Biology Direct, Vol 18, Iss 1, Pp 1-16 (2023)

Subject Terms: Metabolic syndrome, Caveolae, Caveolin-1, Endothelial dysfunction, Mitochondrial remodeling, Cardiac mitochondria dysfunction, Biology (General), QH301-705.5

File Description: electronic resource

Relation: https://doaj.org/toc/1745-6150

Access URL: https://doaj.org/article/b689a209521843abaeb77179977893f7

Evaluation of a membrane filter and platelet-rich plasma (PRP) product obtained from a prototype PRP kit that works through a new method for separating PRP based on cell dimensions

Authors: Subhaini Jakfar, Diana Setya Ningsih, Tzu-Chieh Lin, Zhi-Yu Chen, Feng-Huei Lin, Basri A. Gani, Dharli Syafriza, Hendra Kusuma

Source: AIP Advances, Vol 14, Iss 1, Pp 015305-015305-10 (2024)

Subject Terms: Physics, QC1-999

File Description: electronic resource

Relation: https://doaj.org/toc/2158-3226

Access URL: https://doaj.org/article/cd67d6c6f7ae4d9587d0ce455c7203be

Cardiovascular Safety in Postmenopausal Women and Men With Osteoporosis Treated With Denosumab and Zoledronic Acid: A Post‐Authorization Safety Study

Authors: Leslie Spangler, Carrie M. Nielson, M. Alan Brookhart, Rohini K. Hernandez, Robert Kees Stad, Tzu‐Chieh Lin

Source: JBMR Plus, Vol 7, Iss 10, Pp n/a-n/a (2023)

Subject Terms: ANTIRESORPTIVES, OSTEOPOROSIS, THERAPEUTICS—OTHER, Orthopedic surgery, RD701-811, Diseases of the musculoskeletal system, RC925-935

File Description: electronic resource

Relation: https://doaj.org/toc/2473-4039

Access URL: https://doaj.org/article/129cec94551548f8a9a3a4343cd3a9c5

Culturing reef-building corals on a laboratory dish: a simple experimental platform for stony corals

Authors: Shinya Shikina, Tzu-Chieh Lin, Yu-Ling Chu, Yin-Chu Cheng, Yu-En Chang, Naohisa Wada, Sen-Lin Tang, Yoshiyuki Iizuka, Yi-Ling Chiu

Source: Frontiers in Marine Science, Vol 10 (2023)

Subject Terms: stony corals, culture, laboratory dish, Petri dish, microcolony, Science, General. Including nature conservation, geographical distribution, QH1-199.5

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fmars.2023.1149495/full; https://doaj.org/toc/2296-7745

Access URL: https://doaj.org/article/0a374d9febb148df8731674b7f09cff6

The combination of resveratrol and Bletilla striata polysaccharide decreases inflammatory markers of early osteoarthritis knee and the preliminary results on LPS‐induced OA rats

Authors: Tzu‐Chieh Lin, Jhih‐Ni Lin, I‐Hsuan Yang, Christina Soong, Ya‐Jyun Liang, Subhaini Jakfar, Chun‐Che Yen, Hwa‐Chang Liu, Hsuan‐Yu Chen, Feng‐Huei Lin

Source: Bioengineering & Translational Medicine, Vol 8, Iss 4, Pp n/a-n/a (2023)

Subject Terms: articular cartilage, Bletilla striata, chondrocytes, inflammation, osteoarthritis, oxidative stress, Chemical engineering, TP155-156, Biotechnology, TP248.13-248.65, Therapeutics. Pharmacology, RM1-950

File Description: electronic resource

Relation: https://doaj.org/toc/2380-6761

Access URL: https://doaj.org/article/7dd44b72d15147aea64dc07407a2c4bb

Identification and comparative analysis of long non-coding RNAs in the brain of fire ant queens in two different reproductive states

Authors: Cheng-Hung Tsai, Tzu-Chieh Lin, Yi-Hsien Chang, Huai-Kuang Tsai, Jia-Hsin Huang

Source: BMC Genomics, Vol 22, Iss S5, Pp 1-14 (2022)

Subject Terms: lncRNA, RNA-seq, Differential expression, Brain, Biotechnology, TP248.13-248.65, Genetics, QH426-470

File Description: electronic resource

Relation: https://doaj.org/toc/1471-2164

Access URL: https://doaj.org/article/bd8b6e5f8a3842aba21a5e048ff2dc6b

New design to remove leukocytes from platelet-rich plasma (PRP) based on cell dimension rather than density

Authors: Subhaini Jakfar, Tzu-Chieh Lin, Shinn-Chih Wu, Yao-Horng Wang, Yu-Jun Sun, Minal Thacker, Li-Xin Liu, Feng-Huei Lin

Source: Bioactive Materials, Vol 6, Iss 10, Pp 3528-3540 (2021)

Subject Terms: Platelet-rich plasma (PRP), Filtered-tube design, Homemade design, Cut-off pore size, Platelets, Growth factors, Materials of engineering and construction. Mechanics of materials, TA401-492, Biology (General), QH301-705.5

File Description: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S2452199X21000980; https://doaj.org/toc/2452-199X

Access URL: https://doaj.org/article/af1406a570e8431c95486e4aec32bf31

The development of laminin-alginate microspheres encapsulated with Ginsenoside Rg1 and ADSCs for breast reconstruction after lumpectomy

Authors: I-Hsuan Yang, Yo-Shen Chen, Jia-Jing Li, Ya-Jyun Liang, Tzu-Chieh Lin, Subhaini Jakfar, Minal Thacker, Shinn-Chih Wu, Feng-Huei Lin

Source: Bioactive Materials, Vol 6, Iss 6, Pp 1699-1710 (2021)

Subject Terms: Laminin-alginate microspheres, Adipose-derived stem cells, Ginsenoside Rg1, Bio-electrospray, Tissue engineering, Materials of engineering and construction. Mechanics of materials, TA401-492, Biology (General), QH301-705.5

File Description: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S2452199X20303194; https://doaj.org/toc/2452-199X

Access URL: https://doaj.org/article/2cbd247940e040f88f4959713b64c523

Primary hemiarthroplasty after unstable trochanteric fracture in elderly patients: mortality, readmission and reoperation

Authors: Tzu-Chieh Lin, Pin-Wen Wang, Chun-Teng Lin, Yu-Jun Chang, Ying-Ju Lin, Wen-Miin Liang, Jeff Chien-Fu Lin

Source: BMC Musculoskeletal Disorders, Vol 22, Iss 1, Pp 1-11 (2021)

Subject Terms: Unstable trochanteric fracture, Hemiarthroplasty, Mortality, Readmission, Reoperation, Diseases of the musculoskeletal system, RC925-935

File Description: electronic resource

Relation: https://doaj.org/toc/1471-2474

Access URL: https://doaj.org/article/5c6e59e1428f4d0ca60ba5a176e1b50c

2019 novel coronavirus disease (COVID-19) in Taiwan: Reports of two cases from Wuhan, China

Authors: Wei-Hsuan Huang, Ling-Chiao Teng, Ting-Kuang Yeh, Yu-Jen Chen, Wei-Jung Lo, Ming-Ju Wu, Chun-Shih Chin, Yu-Tse Tsan, Tzu-Chieh Lin, Jyh-Wen Chai, Chin-Fu Lin, Chien-Hao Tseng, Chia-Wei Liu, Chi-Mei Wu, Po-Yen Chen, Zhi-Yuan Shi, Po-Yu Liu

Source: Journal of Microbiology, Immunology and Infection, Vol 53, Iss 3, Pp 481-484 (2020)

Subject Terms: COVID-19, SARS-CoV-2, Pneumonia, Emerging infectious diseases, Zoonosis, Microbiology, QR1-502

File Description: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S1684118220300372; https://doaj.org/toc/1684-1182

Access URL: https://doaj.org/article/74994f476656430a80ade0c47f956788

P2Y12 Inhibitor Monotherapy versus Conventional Dual Antiplatelet Therapy in Patients with Acute Coronary Syndrome after Percutaneous Coronary Intervention: A Meta-Analysis

Authors: Wen-Han Feng, Yong-Chieh Chang, Yi-Hsiung Lin, Hsiao-Ling Chen, Chun-Yin Chen, Tsung-Han Lin, Tzu-Chieh Lin, Ching-Tang Chang, Hsuan-Fu Kuo, Hsiu-Mei Chang, Chih-Sheng Chu

Source: Pharmaceuticals, Vol 16, Iss 2, p 232 (2023)

Subject Terms: P2Y12 inhibitor monotherapy, percutaneous coronary intervention (PCI), acute coronary syndrome (ACS), Medicine, Pharmacy and materia medica, RS1-441

File Description: electronic resource

Relation: https://www.mdpi.com/1424-8247/16/2/232; https://doaj.org/toc/1424-8247

Access URL: https://doaj.org/article/20e4e9e5d2fc40fb958f0683dc6780d1

Global epidemiology of hip fractures: a study protocol using a common analytical platform among multiple countries

Authors: Katia M C Verhamme, Kenneth K C Man, Daniel Prieto-Alhambra, Henrik T Sørensen, Douglas P Kiel, Edward Chia-Cheng Lai, Ian C K Wong, Sirpa Hartikainen, Anna-Maija Tolppanen, Amy Hai Yan Chan, Jenni Ilomäki, Kelvin Bryan Tan, Ju-Young Shin, Ganga Ganesan, Tzu-Chieh Lin, Ching-lung Cheung, Cécile Droz-Perroteau, Nobuhiro Ooba, Kiyoshi Kubota, Manju Chandran, Hongxin Zhao, Chor-Wing Sing, Sharon Bartholomew, Corina Bennett, Kebede Beyene, Pauline Bosco‐Lévy, Caroline Y Doyon, Han Eol Jeong, Jeff Lange, E Michael Lewiecki, Jiannong Liu, Mirhelen Mendes de Abreu, Nicolas Moore, James O’Kelly, Alma B Pedersen, Grace Hsin-Min Wang, Sawaeng Watcharathanakij

Source: BMJ Open, Vol 11, Iss 7 (2021)

Subject Terms: Medicine

File Description: electronic resource

Relation: https://bmjopen.bmj.com/content/11/7/e047258.full; https://doaj.org/toc/2044-6055

Access URL: https://doaj.org/article/46f1802291fa4b418727cc7802ba4411

Prediction of Prognosis in Patients with Trauma by Using Machine Learning

Authors: Kuo-Chang Lee, Chien-Chin Hsu, Tzu-Chieh Lin, Hsiu-Fen Chiang, Gwo-Jiun Horng, Kuo-Tai Chen

Source: Medicina, Vol 58, Iss 10, p 1379 (2022)

Subject Terms: trauma, machine learning, prognostic predictor, mortality, trauma score, Medicine (General), R5-920

File Description: electronic resource

Relation: https://www.mdpi.com/1648-9144/58/10/1379; https://doaj.org/toc/1010-660X; https://doaj.org/toc/1648-9144

Access URL: https://doaj.org/article/c595e594f11e4d03ac2e66b1cc1777b2

Pathogenicity of Avian Polyomaviruses and Prospect of Vaccine Development

Authors: Chen-Wei Wang, Yung-Liang Chen, Simon J. T. Mao, Tzu-Chieh Lin, Ching-Wen Wu, Duangsuda Thongchan, Chi-Young Wang, Hung-Yi Wu

Source: Viruses, Vol 14, Iss 9, p 2079 (2022)

Subject Terms: avian polyomavirus, Gammapolyomavirus, genomic structure, pathogenicity, vaccine, Microbiology, QR1-502

File Description: electronic resource

Relation: https://www.mdpi.com/1999-4915/14/9/2079; https://doaj.org/toc/1999-4915

Access URL: https://doaj.org/article/c33fb3b8b5154b2a9726240fed1fe1fa