Protein language models can capture protein quaternary state

Authors: Orly Avraham, Tomer Tsaban, Ziv Ben-Aharon, Linoy Tsaban, Ora Schueler-Furman

Source: BMC Bioinformatics, Vol 24, Iss 1, Pp 1-18 (2023)

Subject Terms: Protein language models, Natural language processing, Protein quaternary state, Oligomeric state prediction, Multilayer perceptron, Deep learning, Computer applications to medicine. Medical informatics, R858-859.7, Biology (General), QH301-705.5

File Description: electronic resource

Relation: https://doaj.org/toc/1471-2105

Access URL: https://doaj.org/article/a66efeb1f8f24b18b311ff73bedf1f54

Harnessing protein folding neural networks for peptide–protein docking

Authors: Tomer Tsaban, Julia K. Varga, Orly Avraham, Ziv Ben-Aharon, Alisa Khramushin, Ora Schueler-Furman

Source: Nature Communications, Vol 13, Iss 1, Pp 1-12 (2022)

Subject Terms: Science

File Description: electronic resource

Relation: https://doaj.org/toc/2041-1723

Access URL: https://doaj.org/article/498a78dc72be44ae80a6bac350a603c6

Structural basis for UFM1 transfer from UBA5 to UFC1

Authors: Manoj Kumar, Prasanth Padala, Jamal Fahoum, Fouad Hassouna, Tomer Tsaban, Guy Zoltsman, Sayanika Banerjee, Einav Cohen-Kfir, Moshe Dessau, Rina Rosenzweig, Michail N. Isupov, Ora Schueler-Furman, Reuven Wiener

Source: Nature Communications, Vol 12, Iss 1, Pp 1-13 (2021)

Subject Terms: Science

File Description: electronic resource

Relation: https://doaj.org/toc/2041-1723

Access URL: https://doaj.org/article/92a7bec4aca04541b5ce9c87607504cd