Poor hypotheses and research waste in biology: learning from a theory crisis in psychology

Authors: Shinichi Nakagawa, David W. Armitage, Tom Froese, Yefeng Yang, Malgorzata Lagisz

Source: BMC Biology, Vol 23, Iss 1, Pp 1-13 (2025)

Subject Terms: Questionable research practice, Replication crisis, Credibility revolution, Team science, SORTEE, Biology (General), QH301-705.5

File Description: electronic resource

Relation: https://doaj.org/toc/1741-7007

Access URL: https://doaj.org/article/d6ca6a4d5e604d6d96208b38adc94f8c

Beehive scale-free emergent dynamics

Authors: Ivan Shpurov, Tom Froese, Dante R. Chialvo

Source: Scientific Reports, Vol 14, Iss 1, Pp 1-8 (2024)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: https://doaj.org/toc/2045-2322

Access URL: https://doaj.org/article/3a944f7cd80541e784699974a03f37b9

Inter-brain desynchronization in social interaction: a consequence of subjective involvement?

Authors: Tom Froese, Chen Lam Loh, Finda Putri

Source: Frontiers in Human Neuroscience, Vol 18 (2024)

Subject Terms: EEG, hyperscanning, joint action, neural synchrony, social interaction, neural entropy, Neurosciences. Biological psychiatry. Neuropsychiatry, RC321-571

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fnhum.2024.1359841/full; https://doaj.org/toc/1662-5161

Access URL: https://doaj.org/article/ab53f448adc340e3984765045ea391d6

Football as Foraging? Movements by Individual Players and Whole Teams Exhibit Lévy Walk Dynamics

Authors: Ivan Shpurov, Tom Froese, Takashi Ikegami

Source: Complexity, Vol 2024 (2024)

Subject Terms: Electronic computers. Computer science, QA75.5-76.95

File Description: electronic resource

Relation: https://doaj.org/toc/1099-0526

Access URL: https://doaj.org/article/23b4c20798174f1a9fab9c8e1f44834f

Irruption and Absorption: A ‘Black-Box’ Framework for How Mind and Matter Make a Difference to Each Other

Authors: Tom Froese

Source: Entropy, Vol 26, Iss 4, p 288 (2024)

Subject Terms: agency, consciousness, observer, mind–body problem, mental causation, neural entropy, Science, Astrophysics, QB460-466, Physics, QC1-999

File Description: electronic resource

Relation: https://www.mdpi.com/1099-4300/26/4/288; https://doaj.org/toc/1099-4300

Access URL: https://doaj.org/article/d3a88d0f724e4d2e873a16b24771f6e6

Corrigendum: The pandemic experience survey II: A second corpus of subjective reports of life under social restrictions during COVID-19 in the UK, Japan, and Mexico

Authors: Mark M. James, Jamila Rodrigues, Morgan Montoya, Natalia Koshkina, Federico Sangati, Ekaterina Sangati, Matthew Ratcliffe, Havi Carel, Tom Froese

Source: Frontiers in Public Health, Vol 11 (2023)

Subject Terms: survey, COVID-19, cross-cultural, longitudinal, phenomenology, lived experience, Public aspects of medicine, RA1-1270

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fpubh.2023.1141279/full; https://doaj.org/toc/2296-2565

Access URL: https://doaj.org/article/d5c3a7a3f14b4628a46fd5aa040ad76f

The pandemic experience survey II: A second corpus of subjective reports of life under social restrictions during COVID-19 in the UK, Japan, and Mexico

Authors: Mark M. James, Jamila Rodrigues, Morgan Montoya, Natalia Koshkina, Federico Sangati, Ekaterina Sangati, Matthew Ratcliffe, Havi Carel, Tom Froese

Source: Frontiers in Public Health, Vol 10 (2022)

Subject Terms: survey, COVID-19, cross-cultural, longitudinal, phenomenology, lived experience, Public aspects of medicine, RA1-1270

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fpubh.2022.913096/full; https://doaj.org/toc/2296-2565

Access URL: https://doaj.org/article/d9353b9825694698b2a495cae74dc01b

The Problem of Meaning: The Free Energy Principle and Artificial Agency

Authors: Julian Kiverstein, Michael D. Kirchhoff, Tom Froese

Source: Frontiers in Neurorobotics, Vol 16 (2022)

Subject Terms: artificial agency, sensorimotor autonomy, the free energy principle, active inference, problem of meaning, frame problem, Neurosciences. Biological psychiatry. Neuropsychiatry, RC321-571

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fnbot.2022.844773/full; https://doaj.org/toc/1662-5218

Access URL: https://doaj.org/article/31f8a479b5214b0d95996d45ec9cc559

Irruption Theory: A Novel Conceptualization of the Enactive Account of Motivated Activity

Authors: Tom Froese

Source: Entropy, Vol 25, Iss 5, p 748 (2023)

Subject Terms: autopoiesis, adaptivity, embodied cognition, motivated activity, entropy, Science, Astrophysics, QB460-466, Physics, QC1-999

File Description: electronic resource

Relation: https://www.mdpi.com/1099-4300/25/5/748; https://doaj.org/toc/1099-4300

Access URL: https://doaj.org/article/e28293167edf45b59d52693f986fb2c1

Evidence of Critical Dynamics in Movements of Bees inside a Hive

Authors: Ivan Shpurov, Tom Froese

Source: Entropy, Vol 24, Iss 12, p 1840 (2022)

Subject Terms: critical dynamics, collective behavior, phase transition, the Ising model, Science, Astrophysics, QB460-466, Physics, QC1-999

File Description: electronic resource

Relation: https://www.mdpi.com/1099-4300/24/12/1840; https://doaj.org/toc/1099-4300

Access URL: https://doaj.org/article/8fbfcaaaa26d470da6730e62ac35570b

The Pandemic Experience: A Corpus of Subjective Reports on Life During the First Wave of COVID-19 in the UK, Japan, and Mexico

Authors: Tom Froese, Matthew Broome, Havi Carel, Clara Humpston, Alice Malpass, Tomoari Mori, Matthew Ratcliffe, Jamila Rodrigues, Federico Sangati

Source: Frontiers in Public Health, Vol 9 (2021)

Subject Terms: COVID-19, subjective reports of experience, social distancing, corpus, cross-cultural survey, Public aspects of medicine, RA1-1270

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fpubh.2021.725506/full; https://doaj.org/toc/2296-2565

Access URL: https://doaj.org/article/24dd94262c7540718487ee2328176034

Shrunken Social Brains? A Minimal Model of the Role of Social Interaction in Neural Complexity

Authors: Georgina Montserrat Reséndiz-Benhumea, Ekaterina Sangati, Federico Sangati, Soheil Keshmiri, Tom Froese

Source: Frontiers in Neurorobotics, Vol 15 (2021)

Subject Terms: agent-based modeling, social interaction, complexity, entropy, social brains, evolutionary robotics, Neurosciences. Biological psychiatry. Neuropsychiatry, RC321-571

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fnbot.2021.634085/full; https://doaj.org/toc/1662-5218

Access URL: https://doaj.org/article/01c7e3461005407e8a557201878e5160

The Effects of Daytime Psilocybin Administration on Sleep: Implications for Antidepressant Action

Authors: Daniela Dudysová, Karolina Janků, Michal Šmotek, Elizaveta Saifutdinova, Jana Kopřivová, Jitka Bušková, Bryce Anthony Mander, Martin Brunovský, Peter Zach, Jakub Korčák, Veronika Andrashko, Michaela Viktorinová, Filip Tylš, Anna Bravermanová, Tom Froese, Tomáš Páleníček, Jiří Horáček

Source: Frontiers in Pharmacology, Vol 11 (2020)

Subject Terms: neuroplasticity, EEG power spectra, antidepressant, psilocybin, sleep, Rapid Eye Movement sleep, Therapeutics. Pharmacology, RM1-950

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fphar.2020.602590/full; https://doaj.org/toc/1663-9812

Access URL: https://doaj.org/article/2c60ad15328a4bd09f38d9d502c6a964

The Feeling Is Mutual: Clarity of Haptics-Mediated Social Perception Is Not Associated With the Recognition of the Other, Only With Recognition of Each Other

Authors: Tom Froese, Leonardo Zapata-Fonseca, Iwin Leenen, Ruben Fossion

Source: Frontiers in Human Neuroscience, Vol 14 (2020)

Subject Terms: embodied cognition, social cognition, enactive approach, virtual reality, agency detection, perceptual awareness scale, Neurosciences. Biological psychiatry. Neuropsychiatry, RC321-571

File Description: electronic resource

Relation: https://www.frontiersin.org/article/10.3389/fnhum.2020.560567/full; https://doaj.org/toc/1662-5161

Access URL: https://doaj.org/article/f879a3338bf54432a2c8df9d68c8665f

Scientific Observation Is Socio-Materially Augmented Perception: Toward a Participatory Realism

Authors: Tom Froese

Source: Philosophies, Vol 7, Iss 2, p 37 (2022)

Subject Terms: mind–body problem, sensory substitution, direct perception, enactive cognition, tool-use, fact–value gap, Logic, BC1-199, Philosophy (General), B1-5802

File Description: electronic resource

Relation: https://www.mdpi.com/2409-9287/7/2/37; https://doaj.org/toc/2409-9287

Access URL: https://doaj.org/article/44d57a4ed883429ab7398a48c31dbf23

Horizontal transfer of code fragments between protocells can explain the origins of the genetic code without vertical descent

Authors: Tom Froese, Jorge I. Campos, Kosuke Fujishima, Daisuke Kiga, Nathaniel Virgo

Source: Scientific Reports, Vol 8, Iss 1, Pp 1-10 (2018)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: https://doaj.org/toc/2045-2322

Access URL: https://doaj.org/article/7282068fede84953aad9112b488260ba

Where Is the Action in Perception? An Exploratory Study With a Haptic Sensory Substitution Device

Authors: Tom Froese, Guillermo U. Ortiz-Garin

Source: Frontiers in Psychology, Vol 11 (2020)

Subject Terms: active perception, embodied cognition, agency, perceptual discrimination, enactive perception, Enactive Torch, Psychology, BF1-990

File Description: electronic resource

Relation: https://www.frontiersin.org/article/10.3389/fpsyg.2020.00809/full; https://doaj.org/toc/1664-1078

Access URL: https://doaj.org/article/cc0a2ab52f174d16b43cf0028c2d15c8

Unsupervised Learning Facilitates Neural Coordination Across the Functional Clusters of the C. elegans Connectome

Authors: Alejandro Morales, Tom Froese

Source: Frontiers in Robotics and AI, Vol 7 (2020)

Subject Terms: artificial neural networks, self-organization, Hebbian learning, self-modeling, complex adaptive systems, Hopfield networks, Mechanical engineering and machinery, TJ1-1570, Electronic computers. Computer science, QA75.5-76.95

File Description: electronic resource

Relation: https://www.frontiersin.org/article/10.3389/frobt.2020.00040/full; https://doaj.org/toc/2296-9144

Access URL: https://doaj.org/article/f14f780a05164e468d3ef5fd9bda09cf

Book Review: Embodiment, Enaction, and Culture: Investigating the Constitution of the Shared World

Authors: Tom Froese

Source: Frontiers in Psychology, Vol 10 (2019)

Subject Terms: Psychology, BF1-990

File Description: electronic resource

Relation: https://www.frontiersin.org/article/10.3389/fpsyg.2019.01853/full; https://doaj.org/toc/1664-1078

Access URL: https://doaj.org/article/db6b350f2f4749adad63a6a3c39dcc39

La vida es preciosa por ser precaria: individualidad, mortalidad y el significado

Authors: Tom Froese

Source: Iztapalapa, Vol 38, Iss 82/1, Pp 173-198 (2016)

Subject Terms: teoría computacional de la mente, ciencia cognitiva, filosofía de la mente, fenomenología, individualidad, Anthropology, GN1-890, Political science (General), JA1-92, Social sciences (General), H1-99

File Description: electronic resource

Relation: https://revistaiztapalapa.izt.uam.mx/index.php/izt/article/view/47; https://doaj.org/toc/0185-4259; https://doaj.org/toc/2007-9176

Access URL: https://doaj.org/article/b487f3fe21014c1abdeb333f4dd68bbf