Cross-talk between tissues is critical for intergenerational acclimation to environmental change in Acanthochromis polyacanthus

Authors: Sneha Suresh, Megan J. Welch, Philip L. Munday, Timothy Ravasi, Celia Schunter

Source: Communications Biology, Vol 7, Iss 1, Pp 1-11 (2024)

Subject Terms: Biology (General), QH301-705.5

File Description: electronic resource

Relation: https://doaj.org/toc/2399-3642

Access URL: https://doaj.org/article/5da9a27ba1e3457dbf3f80ad257242e5

Transcriptomic responses in the nervous system and correlated behavioural changes of a cephalopod exposed to ocean acidification

Authors: Jodi T. Thomas, Roger Huerlimann, Celia Schunter, Sue-Ann Watson, Philip L. Munday, Timothy Ravasi

Source: BMC Genomics, Vol 25, Iss 1, Pp 1-21 (2024)

Subject Terms: Carbon dioxide, Climate change, Gene expression, Behaviour, Neurotransmission, Neuroplasticity, Biotechnology, TP248.13-248.65, Genetics, QH426-470

File Description: electronic resource

Relation: https://doaj.org/toc/1471-2164

Access URL: https://doaj.org/article/bf04f5b2e6a248468ab3c87e02eff402

Niche–dependent sponge hologenome expression profiles and the host-microbes interplay: a case of the hawaiian demosponge Mycale Grandis

Authors: Fang Liu, Taewoo Ryu, Timothy Ravasi, Xin Wang, Guangyi Wang, Zhiyong Li

Source: Environmental Microbiome, Vol 19, Iss 1, Pp 1-15 (2024)

Subject Terms: Mycale Grandis, Hologenome, Gene expression, Host-microbe interplay, (Meta)transcriptome, GeoChip microarray, Environmental sciences, GE1-350, Microbiology, QR1-502

File Description: electronic resource

Relation: https://doaj.org/toc/2524-6372

Access URL: https://doaj.org/article/c8449a8342f94b90a77b9a351242da54

The transcriptional landscape underlying larval development and metamorphosis in the Malabar grouper (Epinephelus malabaricus)

Authors: Roger Huerlimann, Natacha Roux, Ken Maeda, Polina Pilieva, Saori Miura, Hsiao-chian Chen, Michael Izumiyama, Vincent Laudet, Timothy Ravasi

Source: eLife, Vol 13 (2024)

Subject Terms: life cycle transition, endocrine control, genome, transcriptomics, Medicine, Science, Biology (General), QH301-705.5

File Description: electronic resource

Relation: https://elifesciences.org/articles/94573; https://doaj.org/toc/2050-084X

Access URL: https://doaj.org/article/54834eb0227a4d53919000eb7ab8fe02

Brain transcriptome of gobies inhabiting natural CO2 seeps reveal acclimation strategies to long‐term acidification

Authors: Sneha Suresh, Alice Mirasole, Timothy Ravasi, Salvatrice Vizzini, Celia Schunter

Source: Evolutionary Applications, Vol 16, Iss 7, Pp 1345-1358 (2023)

Subject Terms: anemone goby, brain, climate change, ocean acidification, transcriptomics, Evolution, QH359-425

File Description: electronic resource

Relation: https://doaj.org/toc/1752-4571

Access URL: https://doaj.org/article/e716bbf761884152b6cdbeb7cf9eae80

Fish and coral assemblages of a highly isolated oceanic island: The first eDNA survey of the Ogasawara Islands

Authors: Ayşe Haruka Oshima Açıkbaş, Haruhi Narisoko, Roger Huerlimann, Koki Nishitsuji, Noriyuki Satoh, James Davis Reimer, Timothy Ravasi

Source: Environmental DNA, Vol 6, Iss 1, Pp n/a-n/a (2024)

Subject Terms: coral reefs, environmental DNA, fish, marine biodiversity, metabarcoding, oceanic islands, Environmental sciences, GE1-350, Microbial ecology, QR100-130

File Description: electronic resource

Relation: https://doaj.org/toc/2637-4943

Access URL: https://doaj.org/article/197176d04030451fa2f30f3cca1a4229

Sharks and their relatives: can their past help predict their future?

Authors: Aaron Hasenei, Jennifer M. Donelson, Timothy Ravasi, Jodie L. Rummer

Source: Frontiers in Marine Science, Vol 10 (2023)

Subject Terms: plasticity, adaptation, elasmobranch, climate change, physiology, Science, General. Including nature conservation, geographical distribution, QH1-199.5

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fmars.2023.1268532/full; https://doaj.org/toc/2296-7745

Access URL: https://doaj.org/article/9f256c9c35d2467ab2e72dc81305b22a

Anemonefishes: A model system for evolutionary genomics [version 2; peer review: 2 approved]

Authors: Vincent Laudet, Marcela Herrera, Timothy Ravasi

Source: F1000Research, Vol 12 (2023)

Subject Terms: adaptive radiation, Amphiprion, chromosome-scale assembly, clownfish, genome, pigmentation, eng, Medicine, Science

File Description: electronic resource

Relation: https://f1000research.com/articles/12-204/v2; https://doaj.org/toc/2046-1402

Access URL: https://doaj.org/article/6725f07d06384405bc0a19cf9824d2da

Plasticity to ocean warming is influenced by transgenerational, reproductive, and developmental exposure in a coral reef fish

Authors: Moisés A. Bernal, Timothy Ravasi, Giverny G. Rodgers, Philip L. Munday, Jennifer M. Donelson

Source: Evolutionary Applications, Vol 15, Iss 2, Pp 249-261 (2022)

Subject Terms: acclimation, aerobic metabolism, climate change, gene expression, phenotypic plasticity, Evolution, QH359-425

File Description: electronic resource

Relation: https://doaj.org/toc/1752-4571

Access URL: https://doaj.org/article/4d412c61a4694e6db1e138b62ee9650f

The chromosome-scale genome assembly of the yellowtail clownfish Amphiprion clarkii provides insights into the melanic pigmentation of anemonefish

Authors: Billy Moore, Marcela Herrera, Emma Gairin, Chengze Li, Saori Miura, Jeffrey Jolly, Manon Mercader, Michael Izumiyama, Erina Kawai, Timothy Ravasi, Vincent Laudet, Taewoo Ryu

Source: G3: Genes, Genomes, Genetics, Vol 13, Iss 3 (2023)

Subject Terms: Genetics, QH426-470

File Description: electronic resource

Relation: https://doaj.org/toc/2160-1836

Access URL: https://doaj.org/article/db6383e43ee94691a5516e5d6b0ebc5d

The time course of molecular acclimation to seawater in a euryhaline fish

Authors: Lucrezia C. Bonzi, Alison A. Monroe, Robert Lehmann, Michael L. Berumen, Timothy Ravasi, Celia Schunter

Source: Scientific Reports, Vol 11, Iss 1, Pp 1-16 (2021)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: https://doaj.org/toc/2045-2322

Access URL: https://doaj.org/article/36bbecff78084603b21f19f3d6298c28

Sex‐ and time‐specific parental effects of warming on reproduction and offspring quality in a coral reef fish

Authors: Rachel K. Spinks, Lucrezia C. Bonzi, Timothy Ravasi, Philip L. Munday, Jennifer M. Donelson

Source: Evolutionary Applications, Vol 14, Iss 4, Pp 1145-1158 (2021)

Subject Terms: climate change, developmental plasticity, maternal effects, paternal effects, phenotypic plasticity, timing of exposure, Evolution, QH359-425

File Description: electronic resource

Relation: https://doaj.org/toc/1752-4571

Access URL: https://doaj.org/article/431c5abf705149e6b1aa19c41ef6188a

Parents exposed to warming produce offspring lower in weight and condition

Authors: Rachel K. Spinks, Jennifer M. Donelson, Lucrezia C. Bonzi, Timothy Ravasi, Philip L. Munday

Source: Ecology and Evolution, Vol 12, Iss 7, Pp n/a-n/a (2022)

Subject Terms: climate change, coral reef fish, maternal effects, ontogenetic timing, paternal effects, transgenerational plasticity, Ecology, QH540-549.5

File Description: electronic resource

Relation: https://doaj.org/toc/2045-7758

Access URL: https://doaj.org/article/58cf68b04f4543ff9321f72a7442ada1

Viral ecogenomics across the Porifera

Authors: Cecília Pascelli, Patrick W. Laffy, Emmanuelle Botté, Marija Kupresanin, Thomas Rattei, Miguel Lurgi, Timothy Ravasi, Nicole S. Webster

Source: Microbiome, Vol 8, Iss 1, Pp 1-22 (2020)

Subject Terms: Viromics, Viral ecology, Functional diversity, AMGs, Coral reef sponges, Microbial ecology, QR100-130

File Description: electronic resource

Relation: http://link.springer.com/article/10.1186/s40168-020-00919-5; https://doaj.org/toc/2049-2618

Access URL: https://doaj.org/article/83b7fdfd2e6b4058ae62f4391df1ec0d

Editorial: Adaptation and Phenotypic Plasticity to Climate Change

Authors: Lisa N. S. Shama, Jennifer M. Donelson, Jose M. Eirin-Lopez, Timothy Ravasi

Source: Frontiers in Marine Science, Vol 9 (2022)

Subject Terms: climate change, adaptation, plasticity, epigenetics, marine, aquatic ectotherm, Science, General. Including nature conservation, geographical distribution, QH1-199.5

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fmars.2022.893117/full; https://doaj.org/toc/2296-7745

Access URL: https://doaj.org/article/d505bff3599d4256bfff2d5307c9c460

Molecular Response of the Brain to Cross-Generational Warming in a Coral Reef Fish

Authors: Moisés A. Bernal, Elliott Schmidt, Jennifer M. Donelson, Philip L. Munday, Timothy Ravasi

Source: Frontiers in Marine Science, Vol 9 (2022)

Subject Terms: climate change, gene expression, ocean warming, parental effects, phenotypic plasticity, poikilotherms, Science, General. Including nature conservation, geographical distribution, QH1-199.5

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fmars.2022.784418/full; https://doaj.org/toc/2296-7745

Access URL: https://doaj.org/article/4b67d52977144b6a8a698e5826b53a84

A chromosome-scale genome assembly of the false clownfish, Amphiprion ocellaris

Authors: Taewoo Ryu, Marcela Herrera, Billy Moore, Michael Izumiyama, Erina Kawai, Vincent Laudet, Timothy Ravasi

Source: G3: Genes, Genomes, Genetics, Vol 12, Iss 5 (2022)

Subject Terms: Genetics, QH426-470

File Description: electronic resource

Relation: https://doaj.org/toc/2160-1836

Access URL: https://doaj.org/article/2ad0b0d7f11f4804a4e7019fb9c3ffff

Magnetic core–shell nanowires as MRI contrast agents for cell tracking

Authors: Aldo Isaac Martínez-Banderas, Antonio Aires, Sandra Plaza-García, Lorena Colás, Julián A. Moreno, Timothy Ravasi, Jasmeen S. Merzaban, Pedro Ramos-Cabrer, Aitziber L. Cortajarena, Jürgen Kosel

Source: Journal of Nanobiotechnology, Vol 18, Iss 1, Pp 1-12 (2020)

Subject Terms: Cell tracking, Magnetic resonance imaging, Iron-iron oxide, Core–shell, Nanowires, Cell labeling, Biotechnology, TP248.13-248.65, Medical technology, R855-855.5

File Description: electronic resource

Relation: http://link.springer.com/article/10.1186/s12951-020-00597-3; https://doaj.org/toc/1477-3155

Access URL: https://doaj.org/article/9f32443c70a74ee6aabcf42fa294a974

Proteomic Responses to Ocean Acidification in the Brain of Juvenile Coral Reef Fish

Authors: Hin Hung Tsang, Megan J. Welch, Philip L. Munday, Timothy Ravasi, Celia Schunter

Source: Frontiers in Marine Science, Vol 7 (2020)

Subject Terms: environmental proteomics, climate change, ocean acidification, behavior, tolerance, Science, General. Including nature conservation, geographical distribution, QH1-199.5

File Description: electronic resource

Relation: https://www.frontiersin.org/article/10.3389/fmars.2020.00605/full; https://doaj.org/toc/2296-7745

Access URL: https://doaj.org/article/82669213d2e24ddea1a15d99881cb0e1

An Epigenetic Signature for Within-Generational Plasticity of a Reef Fish to Ocean Warming

Authors: Taewoo Ryu, Heather D. Veilleux, Philip L. Munday, Imgook Jung, Jennifer M. Donelson, Timothy Ravasi

Source: Frontiers in Marine Science, Vol 7 (2020)

Subject Terms: climate change, ocean warming, coral reef fish, epigenetics, DNA methylation, phenotypic plasticity, Science, General. Including nature conservation, geographical distribution, QH1-199.5

File Description: electronic resource

Relation: https://www.frontiersin.org/article/10.3389/fmars.2020.00284/full; https://doaj.org/toc/2296-7745

Access URL: https://doaj.org/article/717d505660464915bf5a95e62a6ab7c7