Diazotrophy in the Indian Ocean: Current understanding and future perspectives

Authors: Subhadeep Chowdhury, Eric Raes, Cora Hörstmann, Ayaz Ahmed, Céline Ridame, Nicolas Metzl, P S Bhavya, Takuya Sato, Takuhei Shiozaki, Sophie Bonnet, Carolin R. Löscher, Arvind Singh, Mar Benavides

Source: Limnology and Oceanography Letters, Vol 8, Iss 5, Pp 707-722 (2023)

Subject Terms: Oceanography, GC1-1581

File Description: electronic resource

Relation: https://doaj.org/toc/2378-2242

Access URL: https://doaj.org/article/092bf767f26e444c8cd2c4f27b568c8c

Coexistence of Dominant Marine Phytoplankton Sustained by Nutrient Specialization

Authors: Takako Masuda, Keisuke Inomura, Jan Mareš, Taketoshi Kodama, Takuhei Shiozaki, Takato Matsui, Koji Suzuki, Shigenobu Takeda, Curtis Deutsch, Ondřej Prášil, Ken Furuya

Source: Microbiology Spectrum, Vol 11, Iss 4 (2023)

Subject Terms: nutrient specialization, Prochlorococcus, Synechococcus, Microbiology, QR1-502

File Description: electronic resource

Relation: https://doaj.org/toc/2165-0497

Access URL: https://doaj.org/article/3aec81f554594bdd919ea0bb1b1cf9c9

Nanomolar phosphate supply and its recycling drive net community production in the subtropical North Pacific

Authors: Fuminori Hashihama, Ichiro Yasuda, Aki Kumabe, Mitsuhide Sato, Hiroshi Sasaoka, Yosuke Iida, Takuhei Shiozaki, Hiroaki Saito, Jota Kanda, Ken Furuya, Philip W. Boyd, Masao Ishii

Source: Nature Communications, Vol 12, Iss 1, Pp 1-8 (2021)

Subject Terms: Science

File Description: electronic resource

Relation: https://doaj.org/toc/2041-1723

Access URL: https://doaj.org/article/d93f8ddcae624b78a6a5f0729cb68be0

Author Correction: Heterogeneous nitrogen fixation rates confer energetic advantage and expanded ecological niche of unicellular diazotroph populations

Authors: Takako Masuda, Keisuke Inomura, Naoto Takahata, Takuhei Shiozaki, Yuji Sano, Curtis Deutsch, Ondřej Prášil, Ken Furuya

Source: Communications Biology, Vol 6, Iss 1, Pp 1-1 (2023)

Subject Terms: Biology (General), QH301-705.5

File Description: electronic resource

Relation: https://doaj.org/toc/2399-3642

Access URL: https://doaj.org/article/1e6c9cc39a9c43c2955aeab8e1623caa

A DNA metabarcoding approach for recovering plankton communities from archived samples fixed in formalin.

Authors: Takuhei Shiozaki, Fumihiro Itoh, Yuu Hirose, Jonaotaro Onodera, Akira Kuwata, Naomi Harada

Source: PLoS ONE, Vol 16, Iss 2, p e0245936 (2021)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: https://doaj.org/toc/1932-6203

Access URL: https://doaj.org/article/2592f0793c7749bda5a16406b971a3e8

Eukaryotic Phytoplankton Contributing to a Seasonal Bloom and Carbon Export Revealed by Tracking Sequence Variants in the Western North Pacific

Authors: Takuhei Shiozaki, Yuu Hirose, Koji Hamasaki, Ryo Kaneko, Kazuo Ishikawa, Naomi Harada

Source: Frontiers in Microbiology, Vol 10 (2019)

Subject Terms: 18S rRNA, eukaryotic phytoplankton, biological pump, coastal diatoms, prasinophytes, Microbiology, QR1-502

File Description: electronic resource

Relation: https://www.frontiersin.org/article/10.3389/fmicb.2019.02722/full; https://doaj.org/toc/1664-302X

Access URL: https://doaj.org/article/4c444ddd6e0a463290520e786ebc82d1

Database of nitrification and nitrifiers in the global ocean

Authors: Weiyi Tang (Department of Geosciences, Princeton University), Bess B. Ward (Department of Geosciences, Princeton University), Michael Beman (Life and Environmental Sciences, University of California, Merced), Laura Bristow (Department of Marine Sciences, University of Gothenburg), Darren Clark (Somerset Scientific Services), Sarah Fawcett (Department of Oceanography, University of Cape Town), Claudia Frey (Department of Environmental Science, University of Basel), François Fripiat (Department of Geosciences, Environment and Society, Université Libre de Bruxelles), Gerhard J. Herndl (Functional and Evolutionary Ecology, Faculty of Life Sciences, University of Vienna), Mhlangabezi Mdutyana (Department of Oceanography, University of Cape Town), Fabien Paulot (Geophysical Fluid Dynamics Laboratory, National Oceanic and Atmospheric Administration, USA), Xuefeng Peng (School of Earth, Ocean and Environment, University of South Carolina), Alyson E. Santoro (Department of Ecology, Evolution and Marine Biology, University of California, Santa Barbara), Takuhei Shiozaki (Atmosphere and Ocean Research Institute, The University of Tokyo), Eva Sintes (Instituto Español de Oceanografía-CSIC, Centro Oceanográfico de Baleares), Charles Stock (Geophysical Fluid Dynamics Laboratory, National Oceanic and Atmospheric Administration, USA), Xin Sun (Department of Global Ecology, Carnegie Institution for Science), Xianhui S. Wan (Department of Geosciences, Princeton University), Min N. Xu (State Key Laboratory of Marine Resource Utilization in South China Sea, Hainan University), Yao Zhang (State Key Laboratory of Marine Environmental Science, Xiamen University)

Availability: http://data.europeana.eu/aggregation/europeana/1300/https___phaidra_univie_ac_at_o_2071250

Investigating Algal Communities in Lacustrine and Hydro-Terrestrial Environments of East Antarctica Using Deep Amplicon Sequencing

Authors: Yuu Hirose, Takuhei Shiozaki, Masahiro Otani, Sakae Kudoh, Satoshi Imura, Toshihiko Eki, Naomi Harada

Source: Microorganisms, Vol 8, Iss 4, p 497 (2020)

Subject Terms: algae, Antarctica, lacustrine, hydro-terrestrial, Cyanobacteria, microbiome, Biology (General), QH301-705.5

File Description: electronic resource

Relation: https://www.mdpi.com/2076-2607/8/4/497; https://doaj.org/toc/2076-2607

Access URL: https://doaj.org/article/f5c54a7e544c4a039ac0d54001d6442b

Characteristics of late summer Arctic brash sea ice and its melting effect on the surface-water biogeochemistry of the Chukchi Shelf and Canada Basin.

Authors: Ryota Akino, Daiki Nomura, Reishi Sahashi, Manami Tozawa, Mariko Hatta, Kohei Matsuno, Wakana Endo, Takuhei Shiozaki, Tatsuya Kawakami, Masato Ito, Akihiko Murata, Amane Fujiwara

Source: Elementa: Science of the Anthropocene; 2024, Vol. 12 Issue 1, p1-20, 20p

Database of nitrification and nitrifiers in the global ocean.

Authors: Weiyi Tang, Ward, Bess B., Beman, Michael, Bristow, Laura, Clark, Darren, Fawcett, Sarah, Frey, Claudia, Fripiat, Francois, Herndl, Gerhard J., Mdutyana, Mhlangabezi, Paulot, Fabien, Xuefeng Peng, Santoro, Alyson E., Takuhei Shiozaki, Sintes, Eva, Stock, Charles, Xin Sun, Wan, Xianhui S., Xu, Min N., Yao Zhang

Source: Earth System Science Data Discussions; 5/24/2023, p1-66, 66p

Subject Terms: NITRIFICATION, DATABASES, NITROGEN cycle, ANOXIC waters, MARINE productivity, CARBON fixation

Nitrogen Fixation and Diazotroph Community in the Subarctic Sea of Japan and Sea of Okhotsk.

Authors: Takuya Sato, Takuhei Shiozaki, Yukiko Taniuchi, Hiromi Kasai, Kazutaka Takahashi

Source: Journal of Geophysical Research. Oceans; Apr2021, Vol. 126 Issue 4, p1-14, 14p

Subject Terms: NITROGEN content of sewage, OCEAN temperature, WATER temperature, NITROGEN fixation, BIOGEOCHEMICAL cycles

Geographic Terms: SEA of Okhotsk

A specific combination of dual index adaptors decreases the sensitivity of amplicon sequencing with the Illumina platform.

Authors: Yuu Hirose, Takuhei Shiozaki, Itsuki Hamano, Shizue Yoshihara, Hayato Tokumoto, Toshihiko Eki, Naomi Harada

Source: DNA Research; Aug2020, Vol. 27 Issue 4, p1-13, 13p, 6 Graphs