Light-modulated neural control of sphincter regulation in the evolution of through-gut

Authors: Junko Yaguchi, Kazumi Sakai, Atsushi Horiuchi, Takashi Yamamoto, Takahiro Yamashita, Shunsuke Yaguchi

Source: Nature Communications, Vol 15, Iss 1, Pp 1-14 (2024)

Subject Terms: Science

File Description: electronic resource

Relation: https://doaj.org/toc/2041-1723

Access URL: https://doaj.org/article/50ac4dcacce649e899d41d57e88c3c51

Cell-wide arrangement of Golgi/RE units depends on the microtubule organization

Authors: Tatsuya Tago, Syara Fujii, Shogo Sasaki, Maki Shirae-Kurabayashi, Naoaki Sakamoto, Takashi Yamamoto, Makoto Maeda, Tatsuya Ueki, Takunori Satoh, Akiko K. Satoh

Source: Cell Structure and Function, Vol 49, Iss 2, Pp 101-110 (2024)

Subject Terms: golgi stack, recycling endosome, golgi-ribbon, microtubule, cilium, sea urchin, ascidian, Science, Biology (General), QH301-705.5

File Description: electronic resource

Relation: https://www.jstage.jst.go.jp/article/csf/49/2/49_24055/_html/-char/en; https://doaj.org/toc/0386-7196; https://doaj.org/toc/1347-3700

Access URL: https://doaj.org/article/0da3109fe66a441b80a6c4f7bfcb1ae9

Direct protein delivery into intact Arabidopsis cells for genome engineering

Authors: Yuichi Furuhata, Mitsuhiro Kimura, Ayako Sakai, Tomi Murakami, Emiko Egi, Tetsushi Sakuma, Takashi Yamamoto, Takeshi Yoshizumi, Yoshio Kato

Source: Scientific Reports, Vol 14, Iss 1, Pp 1-14 (2024)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: https://doaj.org/toc/2045-2322

Access URL: https://doaj.org/article/849580f241614fa8ba47a9fde7c11270

UGGT1-mediated reglucosylation of N-glycan competes with ER-associated degradation of unstable and misfolded glycoproteins

Authors: Satoshi Ninagawa, Masaki Matsuo, Deng Ying, Shuichiro Oshita, Shinya Aso, Kazutoshi Matsushita, Mai Taniguchi, Akane Fueki, Moe Yamashiro, Kaoru Sugasawa, Shunsuke Saito, Koshi Imami, Yasuhiko Kizuka, Tetsushi Sakuma, Takashi Yamamoto, Hirokazu Yagi, Koichi Kato, Kazutoshi Mori

Source: eLife, Vol 12 (2024)

Subject Terms: ER protein quality control, protein folding, protein degradation, UGGT1, EDEM, Medicine, Science, Biology (General), QH301-705.5

File Description: electronic resource

Relation: https://elifesciences.org/articles/93117; https://doaj.org/toc/2050-084X

Access URL: https://doaj.org/article/42d5cb3e54fd4c2c93fd5d5ac18d10e8

High pressure pasteurization: Simultaneous native tissue decellularization and sterilization

Authors: Akihisa Otaka, Takashi Yamamoto, Tetsuji Yamaoka

Source: Regenerative Therapy, Vol 26, Iss , Pp 2-8 (2024)

Subject Terms: Biomaterials, Xenografts, Decellularization, High hydrostatic pressure, Sterilization, Medicine (General), R5-920, Cytology, QH573-671

File Description: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S2352320424000129; https://doaj.org/toc/2352-3204

Access URL: https://doaj.org/article/2db4992a80c845bab001019418750d62

Synthesis of cyclic β-1,6-oligosaccharides from glucosamine monomers by electrochemical polyglycosylation

Authors: Md Azadur Rahman, Hirofumi Endo, Takashi Yamamoto, Shoma Okushiba, Norihiko Sasaki, Toshiki Nokami

Source: Beilstein Journal of Organic Chemistry, Vol 20, Iss 1, Pp 1421-1427 (2024)

Subject Terms: cyclic oligosaccharide, electrochemical glycosylation, glucosamine, polyglycosylation, Science, Organic chemistry, QD241-441

File Description: electronic resource

Relation: https://doaj.org/toc/1860-5397

Access URL: https://doaj.org/article/e04edce771364d9d8cd6bec352d69d7e

GDE5/Gpcpd1 activity determines phosphatidylcholine composition in skeletal muscle and regulates contractile force in mice

Authors: Rahmawati Aisyah, Noriyasu Ohshima, Daiki Watanabe, Yoshiko Nakagawa, Tetsushi Sakuma, Felix Nitschke, Minako Nakamura, Koji Sato, Kaori Nakahata, Chihiro Yokoyama, Charlotte R. Marchioni, Thanutchaporn Kumrungsee, Takahiko Shimizu, Yusuke Sotomaru, Toru Takeo, Naomi Nakagata, Takashi Izumi, Shinji Miura, Berge A. Minassian, Takashi Yamamoto, Masanobu Wada, Noriyuki Yanaka

Source: Communications Biology, Vol 7, Iss 1, Pp 1-17 (2024)

Subject Terms: Biology (General), QH301-705.5

File Description: electronic resource

Relation: https://doaj.org/toc/2399-3642

Access URL: https://doaj.org/article/cb2483d665d74748b78e1920755b6628

Sclerostin modulates mineralization degree and stiffness profile in the fibrocartilaginous enthesis for mechanical tissue integrity

Authors: Shinsei Yambe, Yuki Yoshimoto, Kazutaka Ikeda, Koichiro Maki, Aki Takimoto, Akihide Tokuyama, Shinnosuke Higuchi, Xinyi Yu, Kenta Uchibe, Shigenori Miura, Hitomi Watanabe, Tetsushi Sakuma, Takashi Yamamoto, Kotaro Tanimoto, Gen Kondoh, Masataka Kasahara, Toshihide Mizoguchi, Denitsa Docheva, Taiji Adachi, Chisa Shukunami

Source: Frontiers in Cell and Developmental Biology, Vol 12 (2024)

Subject Terms: sclerostin, Sost, fibrocartilage, mineralization, fibrochondrocytes, Biology (General), QH301-705.5

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fcell.2024.1360041/full; https://doaj.org/toc/2296-634X

Access URL: https://doaj.org/article/427052bd41564fbcaaa067f05c89e21b

Activating 2D MoS2 by loading 2D Cu–S nanoplatelets for improved visible light photocatalytic hydrogen evolution, drug degradation, and CO2 reduction

Authors: Filipp Temerov, Rossella Greco, Joran Celis, Salvador Eslava, Weimin Wang, Takashi Yamamoto, Wei Cao

Source: Results in Materials, Vol 22, Iss , Pp 100569- (2024)

Subject Terms: Materials of engineering and construction. Mechanics of materials, TA401-492

File Description: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S2590048X24000438; https://doaj.org/toc/2590-048X

Access URL: https://doaj.org/article/f7a70290416c4264a8d6049a895db45e

Engineering of Zinc Finger Nucleases Through Structural Modeling Improves Genome Editing Efficiency in Cells

Authors: Shota Katayama, Masahiro Watanabe, Yoshio Kato, Wataru Nomura, Takashi Yamamoto

Source: Advanced Science, Vol 11, Iss 23, Pp n/a-n/a (2024)

Subject Terms: genome editing, protein engineering, structural biology, zinc finger nucleases, Science

File Description: electronic resource

Relation: https://doaj.org/toc/2198-3844

Access URL: https://doaj.org/article/eed14a28a26b48d6a6a856a8ffef3bb8

Global assessment of marine plastic exposure risk for oceanic birds

Authors: Bethany L. Clark, Ana P. B. Carneiro, Elizabeth J. Pearmain, Marie-Morgane Rouyer, Thomas A. Clay, Win Cowger, Richard A. Phillips, Andrea Manica, Carolina Hazin, Marcus Eriksen, Jacob González-Solís, Josh Adams, Yuri V. Albores-Barajas, Joanna Alfaro-Shigueto, Maria Saldanha Alho, Deusa Teixeira Araujo, José Manuel Arcos, John P. Y. Arnould, Nadito J. P. Barbosa, Christophe Barbraud, Annalea M. Beard, Jessie Beck, Elizabeth A. Bell, Della G. Bennet, Maud Berlincourt, Manuel Biscoito, Oskar K. Bjørnstad, Mark Bolton, Katherine A. Booth Jones, John J. Borg, Karen Bourgeois, Vincent Bretagnolle, Joël Bried, James V. Briskie, M. de L. Brooke, Katherine C. Brownlie, Leandro Bugoni, Licia Calabrese, Letizia Campioni, Mark J. Carey, Ryan D. Carle, Nicholas Carlile, Ana R. Carreiro, Paulo Catry, Teresa Catry, Jacopo G. Cecere, Filipe R. Ceia, Yves Cherel, Chang-Yong Choi, Marco Cianchetti-Benedetti, Rohan H. Clarke, Jaimie B. Cleeland, Valentina Colodro, Bradley C. Congdon, Jóhannis Danielsen, Federico De Pascalis, Zoe Deakin, Nina Dehnhard, Giacomo Dell’Omo, Karine Delord, Sébastien Descamps, Ben J. Dilley, Herculano A. Dinis, Jerome Dubos, Brendon J. Dunphy, Louise M. Emmerson, Ana Isabel Fagundes, Annette L. Fayet, Jonathan J. Felis, Johannes H. Fischer, Amanda N. D. Freeman, Aymeric Fromant, Giorgia Gaibani, David García, Carina Gjerdrum, Ivandra Soeli Gonçalves Correia Gomes, Manuela G. Forero, José P. Granadeiro, W. James Grecian, David Grémillet, Tim Guilford, Gunnar Thor Hallgrimsson, Luke R. Halpin, Erpur Snær Hansen, April Hedd, Morten Helberg, Halfdan H. Helgason, Leeann M. Henry, Hannah F. R. Hereward, Marcos Hernandez-Montero, Mark A. Hindell, Peter J. Hodum, Simona Imperio, Audrey Jaeger, Mark Jessopp, Patrick G. R. Jodice, Carl G. Jones, Christopher W. Jones, Jón Einar Jónsson, Adam Kane, Sven Kapelj, Yuna Kim, Holly Kirk, Yann Kolbeinsson, Philipp L. Kraemer, Lucas Krüger, Paulo Lago, Todd J. Landers, Jennifer L. Lavers, Matthieu Le Corre, Andreia Leal, Maite Louzao, Jeremy Madeiros, Maria Magalhães, Mark L. Mallory, Juan F. Masello, Bruno Massa, Sakiko Matsumoto, Fiona McDuie, Laura McFarlane Tranquilla, Fernando Medrano, Benjamin J. Metzger, Teresa Militão, William A. Montevecchi, Rosalinda C. Montone, Leia Navarro-Herrero, Verónica C. Neves, David G. Nicholls, Malcolm A. C. Nicoll, Ken Norris, Steffen Oppel, Daniel Oro, Ellie Owen, Oliver Padget, Vítor H. Paiva, David Pala, Jorge M. Pereira, Clara Péron, Maria V. Petry, Admilton de Pina, Ariete T. Moreira Pina, Patrick Pinet, Pierre A. Pistorius, Ingrid L. Pollet, Benjamin J. Porter, Timothée A. Poupart, Christopher D. L. Powell, Carolina B. Proaño, Júlia Pujol-Casado, Petra Quillfeldt, John L. Quinn, Andre F. Raine, Helen Raine, Iván Ramírez, Jaime A. Ramos, Raül Ramos, Andreas Ravache, Matt J. Rayner, Timothy A. Reid, Gregory J. Robertson, Gerard J. Rocamora, Dominic P. Rollinson, Robert A. Ronconi, Andreu Rotger, Diego Rubolini, Kevin Ruhomaun, Asunción Ruiz, James C. Russell, Peter G. Ryan, Sarah Saldanha, Ana Sanz-Aguilar, Mariona Sardà-Serra, Yvan G. Satgé, Katsufumi Sato, Wiebke C. Schäfer, Stefan Schoombie, Scott A. Shaffer, Nirmal Shah, Akiko Shoji, Dave Shutler, Ingvar A. Sigurðsson, Mónica C. Silva, Alison E. Small, Cecilia Soldatini, Hallvard Strøm, Christopher A. Surman, Akinori Takahashi, Vikash R. V. Tatayah, Graeme A. Taylor, Robert J. Thomas, David R. Thompson, Paul M. Thompson, Thorkell L. Thórarinsson, Diego Vicente-Sastre, Eric Vidal, Ewan D. Wakefield, Susan M. Waugh, Henri Weimerskirch, Heiko U. Wittmer, Takashi Yamamoto, Ken Yoda, Carlos B. Zavalaga, Francis J. Zino, Maria P. Dias

Source: Nature Communications, Vol 14, Iss 1, Pp 1-14 (2023)

Subject Terms: Science

File Description: electronic resource

Relation: https://doaj.org/toc/2041-1723

Access URL: https://doaj.org/article/56773c26a1074a7abc72110b0e673856

Inhibition of OCT4 binding at the MYCN locus induces neuroblastoma cell death accompanied by downregulation of transcripts with high-open reading frame dominance

Authors: Kazuma Nakatani, Hiroyuki Kogashi, Takanori Miyamoto, Taiki Setoguchi, Tetsushi Sakuma, Kazuto Kugou, Yoshinori Hasegawa, Takashi Yamamoto, Yoshitaka Hippo, Yusuke Suenaga

Source: Frontiers in Oncology, Vol 14 (2024)

Subject Terms: neuroblastoma, MYCN, oct4, open reading frame dominance, CRISPR/dCas9, p53, Neoplasms. Tumors. Oncology. Including cancer and carcinogens, RC254-282

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fonc.2024.1237378/full; https://doaj.org/toc/2234-943X

Access URL: https://doaj.org/article/acc0491d59654de7b7070657dd1c0837

Development of a chub mackerel with less-aggressive fry stage by genome editing of arginine vasotocin receptor V1a2

Authors: Hirofumi Ohga, Koki Shibata, Ryo Sakanoue, Takuma Ogawa, Hajime Kitano, Satoshi Kai, Kohei Ohta, Naoki Nagano, Tomoya Nagasako, Seiichi Uchida, Tetsushi Sakuma, Takashi Yamamoto, Sangwan Kim, Kosuke Tashiro, Satoru Kuhara, Koichiro Gen, Atushi Fujiwara, Yukinori Kazeto, Takanori Kobayashi, Michiya Matsuyama

Source: Scientific Reports, Vol 13, Iss 1, Pp 1-13 (2023)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: https://doaj.org/toc/2045-2322

Access URL: https://doaj.org/article/9006dd74c974442aadfd50bbc6816763

The flavor-enhancing action of glutamate and its mechanism involving the notion of kokumi

Authors: Takashi Yamamoto, Chizuko Inui-Yamamoto

Source: npj Science of Food, Vol 7, Iss 1, Pp 1-6 (2023)

Subject Terms: Nutrition. Foods and food supply, TX341-641, Food processing and manufacture, TP368-456

File Description: electronic resource

Relation: https://doaj.org/toc/2396-8370

Access URL: https://doaj.org/article/d41c31e18c3147869b404694796ca767

3D matrix adhesion feedback controls nuclear force coupling to drive invasive cell migration

Authors: Daniel Newman, Lorna E. Young, Thomas Waring, Louise Brown, Katarzyna I. Wolanska, Ewan MacDonald, Arthur Charles-Orszag, Benjamin T. Goult, Patrick T. Caswell, Tetsushi Sakuma, Takashi Yamamoto, Laura M. Machesky, Mark R. Morgan, Tobias Zech

Source: Cell Reports, Vol 42, Iss 12, Pp 113554- (2023)

Subject Terms: CP: Cell biology, Biology (General), QH301-705.5

File Description: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S2211124723015668; https://doaj.org/toc/2211-1247

Access URL: https://doaj.org/article/cc9ca5676a6c4c1a8c9af06188019194

Sound-Absorbing, Thermal-Insulating Material Based on Non-Woven Fabrics Mixed with Aerogel Particles

Authors: Daiji Katsura, Hiroya Ochiai, Mitsuyoshi Kawabe, Takashi Yamamoto, Joji Ohshita

Source: Applied Sciences, Vol 14, Iss 13, p 5368 (2024)

Subject Terms: porous material, sound absorption, thermal insulation, heat insulation, aerogel, non-woven fabric, Technology, Engineering (General). Civil engineering (General), TA1-2040, Biology (General), QH301-705.5, Physics, QC1-999, Chemistry, QD1-999

File Description: electronic resource

Relation: https://www.mdpi.com/2076-3417/14/13/5368; https://doaj.org/toc/2076-3417

Access URL: https://doaj.org/article/bc535f49f098450abd2fa4cd932a8de1

STREAMING-tag system reveals spatiotemporal relationships between transcriptional regulatory factors and transcriptional activity

Authors: Hiroaki Ohishi, Seiru Shimada, Satoshi Uchino, Jieru Li, Yuko Sato, Manabu Shintani, Hitoshi Owada, Yasuyuki Ohkawa, Alexandros Pertsinidis, Takashi Yamamoto, Hiroshi Kimura, Hiroshi Ochiai

Source: Nature Communications, Vol 13, Iss 1, Pp 1-19 (2022)

Subject Terms: Science

File Description: electronic resource

Relation: https://doaj.org/toc/2041-1723

Access URL: https://doaj.org/article/6c98c1dca35547af9846761d5b135fd4

Electro-conversion of cumene into acetophenone using boron-doped diamond electrodes

Authors: Mana Kitano, Tsuyoshi Saitoh, Shigeru Nishiyama, Yasuaki Einaga, Takashi Yamamoto

Source: Beilstein Journal of Organic Chemistry, Vol 18, Iss 1, Pp 1154-1158 (2022)

Subject Terms: aromatic alkyl, boron-doped diamond electrode, electrosynthesis, oxidation, Science, Organic chemistry, QD241-441

File Description: electronic resource

Relation: https://doaj.org/toc/1860-5397

Access URL: https://doaj.org/article/a96b293adc4246ccac39e8d1d94e2d34

Sound-Absorbing, Thermal-Insulating Material Based on Poly(methylsiloxane) Xerogel and Cellulose Nanofibers

Authors: Daiji Katsura, Tetsuya Maeda, Kazuyoshi Kanamori, Takashi Yamamoto, Joji Ohshita

Source: Applied Sciences, Vol 14, Iss 6, p 2570 (2024)

Subject Terms: porous material, sound absorption, thermal insulation, heat insulation, poly(methylsiloxane) xerogel, cellulose nanofiber, Technology, Engineering (General). Civil engineering (General), TA1-2040, Biology (General), QH301-705.5, Physics, QC1-999, Chemistry, QD1-999

File Description: electronic resource

Relation: https://www.mdpi.com/2076-3417/14/6/2570; https://doaj.org/toc/2076-3417

Access URL: https://doaj.org/article/125d8b9ac11644ebb258ce6d45b1caab

Factors associated with gravity-dependent distribution on chest CT in elderly patients with community-acquired pneumonia: a retrospective observational study

Authors: Kosaku Komiya, Takashi Yamamoto, Hiroki Yoshikawa, Akihiko Goto, Kenji Umeki, Takeshi Johkoh, Kazufumi Hiramatsu, Jun-ichi Kadota

Source: Scientific Reports, Vol 12, Iss 1, Pp 1-7 (2022)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: https://doaj.org/toc/2045-2322

Access URL: https://doaj.org/article/6d644f1eaba247a6b90bf9c09c4596b2