Image processing in DNA

Authors: Pan, Chao, Yazdi, S. M. Hossein Tabatabaei, Tabatabaei, S Kasra, Hernandez, Alvaro G., Schroeder, Charles, Milenkovic, Olgica

Subject Terms: Electrical Engineering and Systems Science - Image and Video Processing, Computer Science - Computer Vision and Pattern Recognition, Computer Science - Machine Learning

Access URL: http://arxiv.org/abs/1910.10095

One-pot Golden Gate Assembly of an avian infectious bronchitis virus reverse genetics system.

Authors: Bilotti, Katharina, Keep, Sarah, Sikkema, Andrew P., Pryor, John M., Kirk, James, Foldes, Katalin, Doyle, Nicole, Wu, Ge, Freimanis, Graham, Dowgier, Giulia, Adeyemi, Oluwapelumi, Tabatabaei, S. Kasra, Lohman, Gregory J. S., Bickerton, Erica

Source: PLoS ONE; 7/25/2024, Vol. 19 Issue 7, p1-24, 24p

Subject Terms: AVIAN infectious bronchitis virus, REVERSE genetics, VIRAL genetics, AVIAN infectious bronchitis, MOLECULAR biology, AVIAN influenza A virus

High‐Complexity One‐Pot Golden Gate Assembly.

Authors: Sikkema, Andrew P., Tabatabaei, S. Kasra, Lee, Yan‐Jiun, Lund, Sean, Lohman, Gregory J. S.

Source: Current Protocols; Sep2023, Vol. 3 Issue 9, p1-47, 47p

Solid-State MoS2 Nanopore Membranes for Discriminating among the Lengths of RNA Tails on a Double-Stranded DNA: A New Simulation-Based Differentiating Algorithm.

Authors: Chakraborty, Rajat, Xiong, Mingye, Athreya, Nagendra, Tabatabaei, S Kasra, Milenkovic, Olgica, Leburton, Jean-Pierre

Source: ACS Applied Nano Materials; 3/24/2023, Vol. 6 Issue 6, p4651-4660, 10p

Rewritable two-dimensional DNA-based data storage with machine learning reconstruction.

Authors: Pan, Chao, Tabatabaei, S. Kasra, Tabatabaei Yazdi, S. M. Hossein, Hernandez, Alvaro G., Schroeder, Charles M., Milenkovic, Olgica

Source: Nature Communications; 5/27/2022, Vol. 13 Issue 1, p1-12, 12p

Subject Terms: DATA warehousing, MACHINE learning, NUCLEOTIDE sequence, DNA structure, ARTIFICIAL chromosomes

Cas12a-assisted precise targeted cloning using in vivo Cre-lox recombination.

Authors: Enghiad, Behnam, Huang, Chunshuai, Guo, Fang, Jiang, Guangde, Wang, Bin, Tabatabaei, S. Kasra, Martin, Teresa A., Zhao, Huimin

Source: Nature Communications; 2/19/2021, Vol. 12 Issue 1, p1-11, 11p

Subject Terms: GRAM-positive bacteria, METHICILLIN-resistant staphylococcus aureus, MOLECULAR cloning, ENTEROCOCCUS faecium, NATURAL numbers, DEFENSINS

DNA punch cards for storing data on native DNA sequences via enzymatic nicking.

Authors: Tabatabaei, S. Kasra, Wang, Boya, Athreya, Nagendra Bala Murali, Enghiad, Behnam, Hernandez, Alvaro Gonzalo, Fields, Christopher J., Leburton, Jean-Pierre, Soloveichik, David, Zhao, Huimin, Milenkovic, Olgica

Source: Nature Communications; 4/8/2020, Vol. 11 Issue 1, p1-10, 10p

Subject Terms: NUCLEOTIDE sequence, DNA, PYROCOCCUS furiosus, DATA warehousing, SEQUENCE alignment, ESCHERICHIA coli