Abnormal open states patterns in the ATXN2 DNA sequence depends on the CAG repeats length

Authors: Drobotenko, Mikhail I., Lyasota, Oksana M., Hernandez-Caceres, Jose Luis, Labrada, Roberto Rodriguez, Svidlov, Alexandr A., Dorohova, Аnna A., Baryshev, Mikhail G., Nechipurenko, Yury D., Pérez, Luis Velázquez, Dzhimak, Stepan S.

Source: In International Journal of Biological Macromolecules September 2024 276 Part 1

Medium viscosity influence on the open states genesis in a DNA molecule.

Authors: Drobotenko, Mikhail I., Svidlov, Alexandr A., Dorohova, Аnna A., Baryshev, Mikhail G., Dzhimak, Stepan S.

Source: Journal of Biomolecular Structure & Dynamics; Mar2025, Vol. 43 Issue 5, p2253-2261, 9p

Localization of Potential Energy in Hydrogen Bonds of the ATXN2 Gene.

Authors: Drobotenko, Mikhail, Lyasota, Oksana, Dzhimak, Stepan, Svidlov, Alexandr, Baryshev, Mikhail, Leontyeva, Olga, Dorohova, Anna

Source: International Journal of Molecular Sciences; Feb2025, Vol. 26 Issue 3, p933, 13p

Subject Terms: NUCLEOTIDE sequence, MECHANICAL oscillations, TRINUCLEOTIDE repeats, HYDROGEN as fuel, MECHANICAL energy

Fluctuations in Medium Viscosity May Affect the Stability of the CAG Tract in the ATXN2 Gene.

Authors: Dorohova, Anna, Lyasota, Oksana, Dzhimak, Stepan, Svidlov, Alexandr, Leontyeva, Olga, Drobotenko, Mikhail

Source: Biomedicines; Oct2024, Vol. 12 Issue 10, p2396, 12p

Subject Terms: TRINUCLEOTIDE repeats, AGE of onset, NEURODEGENERATION, PREVENTIVE medicine, VISCOSITY

Stability of the CAG Tract in the ATXN2 Gene Depends on the Localization of CAA Interruptions.

Authors: Lyasota, Oksana, Dorohova, Anna, Hernandez-Caceres, Jose Luis, Svidlov, Alexandr, Tekutskaya, Elena, Drobotenko, Mikhail, Dzhimak, Stepan

Source: Biomedicines; Aug2024, Vol. 12 Issue 8, p1648, 7p

Subject Terms: TRINUCLEOTIDE repeats, HAIRPINS, GENETIC code, DNA, PARKINSONIAN disorders

Genesis of Open States Zones in a DNA Molecule Depends on the Localization and Value of the Torque.

Authors: Dzhimak, Stepan^1,2 (AUTHOR) jimack@mail.ru, Svidlov, Alexandr^1,2 (AUTHOR) anna013194@mail.ru, Elkina, Anna^1,2 (AUTHOR) baryshev_mg@mail.ru, Gerasimenko, Eugeny³ (AUTHOR) rosmaplus@gmail.com, Baryshev, Mikhail^1,2,3 (AUTHOR) mdrobotenko@mail.ru, Drobotenko, Mikhail¹ (AUTHOR)

Source: International Journal of Molecular Sciences. Apr2022, Vol. 23 Issue 8, p4428-4428. 13p.

Subject Terms: *BASE pairs, *TORQUE, *DNA, *TORSION, *MOLECULES

Influence of a Single Deuterium Substitution for Protium on the Frequency Generation of Different-Size Bubbles in IFNA17.

Authors: Basov, Alexandr, Dorohova, Anna, Malyshko, Vadim, Moiseev, Arkadii, Svidlov, Alexandr, Bezhenar, Maria, Nechipurenko, Yury, Dzhimak, Stepan

Source: International Journal of Molecular Sciences; Aug2023, Vol. 24 Issue 15, p12137, 22p

Subject Terms: BASE pairs, HYDROGEN isotopes, INTERFERON receptors, DEUTERIUM, THRESHOLD energy, ISOTOPE exchange reactions, INVERSE relationships (Mathematics)

Inequality in the Frequency of the Open States Occurrence Depends on Single 2H/1H Replacement in DNA.

Authors: Basov, Alexander, Drobotenko, Mikhail, Svidlov, Alexandr, Gerasimenko, Eugeny, Malyshko, Vadim, Elkina, Anna, Baryshev, Mikhail, Dzhimak, Stepan, González-Díaz, Humbert

Source: Molecules; 8/15/2020, Vol. 25 Issue 16, p3753, 1p, 5 Diagrams, 4 Charts, 3 Graphs

Subject Terms: DNA, SINGLE-stranded DNA, HYDROGEN bonding, INTERFERON alpha, MATHEMATICAL equivalence, DEUTERIUM