POLE-Mutated Uterine Carcinosarcomas: A Clinicopathologic and Molecular Study of 11 Cases

Authors: Hammer, Phoebe M. ^a, Momeni-Boroujeni, Amir ^b, Kolin, David L. ^c, Kingsley, Leandra ^a, Folkins, Ann ^a, Geisick, Rachel L.P. ^a, Ho, Chandler ^a, Suarez, Carlos J. ^a, Howitt, Brooke E. ^{a, ∗}

Source: In Modern Pathology March 2025 38(3)

Congenital Peribronchial Myofibroblastic Tumors Harbor a Recurrent EGFR Kinase Domain Duplication

Authors: Younes, Sheren ^a, Suarez, Carlos J. ^a, Pogoriler, Jennifer ^b, Bhatti, Tricia ^b, Shenoy, Archana ^{c, d}, Saab, Raya ^e, Surrey, Lea F. ^b, Tan, Serena Y. ^{a, ∗}

Source: In Modern Pathology February 2025 38(2)

DNA-PKcs inhibition improves sequential gene insertion of the full-length CFTR cDNA in airway stem cells

Authors: Stack, Jacob T., Rayner, Rachael E., Nouri, Reza, Suarez, Carlos J., Kim, Sun Hee, Kanke, Karen L., Vetter, Tatyana A., Cormet-Boyaka, Estelle, Vaidyanathan, Sriram

Source: In Molecular Therapy - Nucleic Acids 10 December 2024 35(4)

Targeted mutational profiling of Epstein Barr virus-positive mucocutaneous ulcer: Implications for differential diagnosis with EBV-positive diffuse large B-cell lymphoma

Authors: Volaric, Ashley K., Kumar, Jyoti, Nicholas, Veronica, Saleem, Atif, Fernandez-Pol, Sebastian, Suarez, Carlos J., Natkunam, Yasodha

Source: In Annals of Diagnostic Pathology December 2024 73

Randomized Study of Temozolomide or Temozolomide and Capecitabine in Patients With Advanced Pancreatic Neuroendocrine Tumors (ECOG-ACRIN E2211)

Authors: Kunz, Pamela L., Graham, Noah T., Catalano, Paul J., Nimeiri, Halla S., Fisher, George A., Longacre, Teri A., Suarez, Carlos J., Martin, Brock A., Yao, James C., Kulke, Matthew H., Hendifar, Andrew E., Shanks, James C., Shah, Manisha H., Zalupski, Mark M., Schmulbach, Edmond L., Reidy-Lagunes, Diane L., Strosberg, Jonathan R., O'Dwyer, Peter J., Benson, Al B.

Source: Journal of clinical oncology. 41(7):1359-1369

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100187185555.0x000001&indx=1&recIds=ETOCvdc_100187185555.0x000001

Targeted Mutational Profiling Reveals Clonal Relationships in Metachronous Occurrence of Classic Hodgkin and Mediastinal Large B-Cell Lymphomas

Authors: Singh, Kunwar, Lezama, Lhara S., Kurzer, Jason, Oak, Jean, Schultz, Liora M., Walkush, Ann, Cheng, Tse-Chang, Chen, Everett H., May, William A., Chang, Cheryl, Link, Michael P., Advani, Ranjana H., Suarez, Carlos J., Natkunam, Yasodha

Source: American journal of surgical pathology. 47(1):81-90

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100186832465.0x000001&indx=1&recIds=ETOCvdc_100186832465.0x000001

Recommendations for the Use of in Silico Approaches for Next-Generation Sequencing Bioinformatic Pipeline Validation

Authors: Duncavage, Eric J., Coleman, Joshua F., de Baca, Monica E., Kadri, Sabah, Leon, Annette, Routbort, Mark, Roy, Somak, Suarez, Carlos J., Vanderbilt, Chad, Zook, Justin M.

Source: Journal of molecular diagnostics. 25(1):3-16

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100178526309.0x000001&indx=1&recIds=ETOCvdc_100178526309.0x000001

Circulating tumor DNA monitoring for early recurrence detection in epithelial ovarian cancer

Authors: Hou, June Y., Chapman, Jocelyn S., Kalashnikova, Ekaterina, Pierson, William, Smith-McCune, Karen, Pineda, Geovanni, Vattakalam, Reena Marie, Ross, Alexandra, Mills, Meredith, Suarez, Carlos J., Davis, Tracy, Edwards, Robert, Boisen, Michelle, Sawyer, Sarah, Wu, Hsin-Ta, Dashner, Scott, Aushev, Vasily N., George, Giby V., Malhotra, Meenakshi, Zimmermann, Bernhard, Sethi, Himanshu, ElNaggar, Adam C., Aleshin, Alexey, Ford, James M.

Source: In Gynecologic Oncology November 2022 167(2):334-341

In Silico Approaches to Proficiency Testing

Authors: Hagemann, Ian S., Zehir, Ahmet, Suarez, Carlos J., Furtado, Larissa V., Halley, Jaimie, Kane, Megan, Mot, Nicole, Vasalos, Patricia, Moncur, Joel T., Konnick, Eric Q.

Source: Journal of molecular diagnostics. 25(8):533-535

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100194791890.0x000001&indx=1&recIds=ETOCvdc_100194791890.0x000001

A Multiplex SNaPshot Assay is a Rapid and Cost-Effective Method for Detecting POLE Exonuclease Domain Mutations in Endometrial Carcinoma

Authors: Devereaux, Kelly A., Steiner, David F., Ho, Chandler, Gomez, Adam J., Gilks, Blake, Longacre, Teri A., Zehnder, James L., Howitt, Brooke E., Suarez, Carlos J.

Source: International journal of gynecological pathology. 41(6):541-551

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100178623925.0x000001&indx=1&recIds=ETOCvdc_100178623925.0x000001

Targeted replacement of full-length CFTR in human airway stem cells by CRISPR-Cas9 for pan-mutation correction in the endogenous locus

Authors: Vaidyanathan, Sriram, Baik, Ron, Chen, Lu, Bravo, Dawn T., Suarez, Carlos J., Abazari, Shayda M., Salahudeen, Ameen A., Dudek, Amanda M., Teran, Christopher A., Davis, Timothy H., Lee, Ciaran M., Bao, Gang, Randell, Scott H., Artandi, Steven E., Wine, Jeffrey J., Kuo, Calvin J., Desai, Tushar J., Nayak, Jayakar V., Sellers, Zachary M., Porteus, Matthew H.

Source: Molecular therapy. 30(1):223-237

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100170950159.0x000001&indx=1&recIds=ETOCvdc_100170950159.0x000001

Applications of machine learning in routine laboratory medicine: Current state and future directions

Authors: Rabbani, Naveed, Kim, Grace Y.E., Suarez, Carlos J., Chen, Jonathan H.

Source: Clinical biochemistry. 103:1-7

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100159643075.0x000001&indx=1&recIds=ETOCvdc_100159643075.0x000001

Prospective molecular classification of endometrial carcinomas: institutional implementation, practice, and clinical experience

Authors: Devereaux, Kelly A., Weiel, Julianna J., Pors, Jennifer, Steiner, David F., Ho, Chandler, Charu, Vivek, Suarez, Carlos J., Renz, Malte, Diver, Elisabeth, Karam, Amer, Litkouhi, Babak, Dorigo, Oliver, Kidd, Elizabeth A., Yang, Eric J., Folkins, Ann K., Longacre, Teri A., Howitt, Brooke E.

Source: In Modern Pathology May 2022 35(5):688-696

Accurate Detection and Quantification of FLT3 Internal Tandem Duplications in Clinical Hybrid Capture Next-Generation Sequencing Data

Authors: Tung, Jack K., Suarez, Carlos J., Chiang, Tsoyu, Zehnder, James L., Stehr, Henning

Source: In The Journal of Molecular Diagnostics October 2021 23(10):1404-1413

Two Cases With Features of Lymphocyte Variant Hypereosinophilic Syndrome With STAT3 SH2 Domain Mutations

Authors: Fernandez-Pol, Sebastian, Petersen, Bruce, Murphy, Jo-Ellen, Oak, Jean S., Wang, Erica B.K., Rieger, Kerri E., Kim, Youn H., Khodadoust, Michael S., Suarez, Carlos J.

Source: American journal of surgical pathology. 45(2):193-199

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100185884687.0x000001&indx=1&recIds=ETOCvdc_100185884687.0x000001

Molecular classification of metastatic and recurrent endometrial endometrioid carcinoma: prognostic relevance among low‐ and high‐stage tumours.

Authors: McHenry, Austin, Devereaux, Kelly, Ryan, Emily, Chow, Stephanie, Allard, Grace, Ho, Chandler C, Suarez, Carlos J, Folkins, Ann, Yang, Eric, Longacre, Teri A, Charu, Vivek, Howitt, Brooke E

Source: Histopathology; Oct2024, Vol. 85 Issue 4, p614-626, 13p

Subject Terms: ENDOMETRIAL cancer, TUMOR classification, MICROSATELLITE repeats, METASTASIS, PROGNOSIS

Multi-Institutional Evaluation of Interrater Agreement of Variant Classification Based on the 2017 Association for Molecular Pathology, American Society of Clinical Oncology, and College of American Pathologists Standards and Guidelines for the Interpretation and Reporting of Sequence Variants in Cancer

Authors: Sirohi, Deepika, Schmidt, Robert L., Aisner, Dara L., Behdad, Amir, Betz, Bryan L., Brown, Noah, Coleman, Joshua F., Corless, Christopher L., Deftereos, Georgios, Ewalt, Mark D., Fernandes, Helen, Hsiao, Susan J., Mansukhani, Mahesh M., Murray, Sarah S., Niu, Nifang, Ritterhouse, Lauren L., Suarez, Carlos J., Tafe, Laura J., Thorson, John A., Segal, Jeremy P., Furtado, Larissa V.

Source: In The Journal of Molecular Diagnostics February 2020 22(2):284-293

Molecular Classification Outperforms Histologic Classification in Prognostication of High-grade Endometrial Carcinomas With Undifferentiated and Sarcomatous Components.

Authors: Hammer, Phoebe M., Aihui Wang, Vermij, Lisa, Zdravkovic, Sabrina, Heilbroner, Lucas, Ryan, Emily, Geisick, Rachel L. P., Charu, Vivek, Longacre, Teri A., Suarez, Carlos J., Ho, Chandler, Jenkins, Taylor M., Mills, Anne M., Bosse, Tjalling, Howitt, Brooke E.

Source: American Journal of Surgical Pathology; Aug2024, Vol. 48 Issue 8, p953-964, 12p

Pharma-Oncogenomics in the Era of Personal Genomics: A Quick Guide to Online Resources and Tools

Authors: Joshi, Rohan P., Steiner, David F., Konnick, Eric Q., Suarez, Carlos J.

Source: Advances in experimental medicine and biology. 1168:103-116

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCRN622273819&indx=1&recIds=ETOCRN622273819

Promoting appropriate genetic testing: the impact of a combined test review and consultative service

Authors: Suarez, Carlos J., Yu, Linbo, Downs, Natalie, Costa, Helio A., Stevenson, David A.

Source: In Genetics in Medicine September 2017 19(9):1049-1054