Comparing T cell receptor repertoires using optimal transport.

Authors: Branden J Olson, Stefan A Schattgen, Paul G Thomas, Philip Bradley, Frederick A Matsen Iv

Source: PLoS Computational Biology, Vol 18, Iss 12, p e1010681 (2022)

Subject Terms: Biology (General), QH301-705.5

File Description: electronic resource

Relation: https://doaj.org/toc/1553-734X; https://doaj.org/toc/1553-7358

Access URL: https://doaj.org/article/07e08b08cdfd43c5b68f7ac983c2b188

Combining genotypes and T cell receptor distributions to infer genetic loci determining V(D)J recombination probabilities

Authors: Magdalena L Russell, Aisha Souquette, David M Levine, Stefan A Schattgen, E Kaitlynn Allen, Guillermina Kuan, Noah Simon, Angel Balmaseda, Aubree Gordon, Paul G Thomas, Frederick A Matsen IV, Philip Bradley

Source: eLife, Vol 11 (2022)

Subject Terms: t cell receptor repertoire, VDJ recombination probabilities, GWAS, Artemis, TdT, Medicine, Science, Biology (General), QH301-705.5

File Description: electronic resource

Relation: https://elifesciences.org/articles/73475; https://doaj.org/toc/2050-084X

Access URL: https://doaj.org/article/95bf64a4fda74d50b1793c5c3f136e61

Single cell and TCR analysis of immune cells from AAV gene therapy-dosed Duchenne muscular dystrophy patients

Authors: Michael R. Emami, Mark A. Brimble, Alejandro Espinoza, Jane Owens, Laurence O. Whiteley, Sandra Casinghino, Thomas A. Lanz, Philip K. Farahat, Matteo Pellegrini, Courtney S. Young, Paul G. Thomas, Elizabeth M. McNally, S. Armando Villalta, Stefan A. Schattgen, Melissa J. Spencer

Source: Molecular Therapy: Methods & Clinical Development, Vol 32, Iss 4, Pp 101349- (2024)

Subject Terms: adeno-associated virus, AAV, gene therapy, neuromuscular disorders, muscular dystrophy, Duchenne, Genetics, QH426-470, Cytology, QH573-671

File Description: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S2329050124001657; https://doaj.org/toc/2329-0501

Access URL: https://doaj.org/article/fee20f3ef621479e9e7090e49aade946

Secondary bone marrow graft loss after third-party virus-specific T cell infusion: Case report of a rare complication

Authors: Michael D. Keller, Stefan A. Schattgen, Shanmuganathan Chandrakasan, E. Kaitlynn Allen, Mariah A. Jensen-Wachspress, Christopher A. Lazarski, Muna Qayed, Haili Lang, Patrick J. Hanley, Jay Tanna, Sung-Yun Pai, Suhag Parikh, Seth I. Berger, Stephen Gottschalk, Michael A. Pulsipher, Paul G. Thomas, Catherine M. Bollard

Source: Nature Communications, Vol 15, Iss 1, Pp 1-9 (2024)

Subject Terms: Science

File Description: electronic resource

Relation: https://doaj.org/toc/2041-1723

Access URL: https://doaj.org/article/2d98f25b1b53444d849e04310e6b7692

Comparing T cell receptor repertoires using optimal transport

Authors: Branden J. Olson, Stefan A. Schattgen, Paul G. Thomas, Philip Bradley, Frederick A. Matsen IV

Source: PLoS Computational Biology, Vol 18, Iss 12 (2022)

Subject Terms: Biology (General), QH301-705.5

File Description: electronic resource

Relation: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9728925/?tool=EBI; https://doaj.org/toc/1553-734X; https://doaj.org/toc/1553-7358

Access URL: https://doaj.org/article/f57ce3b08e2048eea1c4e7c612b87c51