Computational framework for the generation of one-dimensional vascular models accounting for uncertainty in networks extracted from medical images

Authors: Bartolo, Michelle A, Taylor-LaPole, Alyssa M, Gandhi, Darsh, Johnson, Alexandria, Li, Yaqi, Slack, Emma, Stevens, Isaiah, Turner, Zachary, Weigand, Justin D, Puelz, Charles, Husmeier, Dirk, Olufsen, Mette S

Subject Terms: Quantitative Biology - Tissues and Organs, Quantitative Biology - Quantitative Methods

Access URL: http://arxiv.org/abs/2309.08779

Salmonella Typhimurium screen identifies shifts in mixed-acid fermentation during gut colonization

Authors: Nguyen, Bidong D., Sintsova, Anna, Schubert, Christopher, Sichert, Andreas, Scheidegger, Clio, Näf, Jana, Huttman, Julien, Lentsch, Verena, Keys, Tim, Rutschmann, Christoph, Christen, Philipp, Kiefer, Patrick, Keller, Philipp, Barthel, Manja, Cuenca, Miguelangel, Christen, Beat, Sauer, Uwe, Slack, Emma, Vorholt, Julia A., Sunagawa, Shinichi, Hardt, Wolf-Dietrich

Source: In Cell Host & Microbe 9 October 2024 32(10):1758-1773

Exploring the relationship between early cognitive ability and age-60 sleep quality: The Newcastle Thousand Families Study birth cohort

Authors: Grebby, Jess, Slack, Emma L., Wells-Dean, Natalja, St. Clair-Thompson, Helen, Pearce, Mark S.

Source: In Sleep Health: Journal of the National Sleep Foundation October 2024 10(5):594-601

'EvoVax' – A rationally designed inactivated Salmonella Typhimurium vaccine induces strong and long-lasting immune responses in pigs

Authors: Lentsch, Verena, Aslani, Selma, Echtermann, Thomas, Preet, Swapan, Cappio Barazzone, Elisa, Hoces, Daniel, Moresi, Claudia, Kümmerlen, Dolf, Slack, Emma

Source: Vaccine. 41(38):5545-5552

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100195746232.0x000001&indx=1&recIds=ETOCvdc_100195746232.0x000001

Mechanical tuning of virus-like particles

Authors: Radiom, Milad, Keys, Tim, Turgay, Yagmur, Ali, Ahmed, Preet, Swapan, Chesnov, Serge, Lutz-Bueno, Viviane, Slack, Emma, Mezzenga, Raffaele

Source: Journal of colloid and interface science. 634:963-971

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100188002162.0x000001&indx=1&recIds=ETOCvdc_100188002162.0x000001

Non-invasive monitoring of microbiota and host metabolism using secondary electrospray ionization-mass spectrometry

Authors: Lan, Jiayi, Greter, Giorgia, Streckenbach, Bettina, Wanner, Benedikt, Arnoldini, Markus, Zenobi, Renato, Slack, Emma

Source: In Cell Reports Methods 28 August 2023 3(8)

Resistance is futile? Mucosal immune mechanisms in the context of microbial ecology and evolution

Authors: Slack, Emma, Diard, Médéric

Source: In Mucosal Immunology November 2022 15(6):1188-1198

Microbiome-based interventions to modulate gut ecology and the immune system

Authors: Hitch, Thomas C.A., Hall, Lindsay J., Walsh, Sarah Kate, Leventhal, Gabriel E., Slack, Emma, de Wouters, Tomas, Walter, Jens, Clavel, Thomas

Source: In Mucosal Immunology November 2022 15(6):1095-1113

IL-1 mediates microbiome-induced inflammaging of hematopoietic stem cells in mice

Authors: Kovtonyuk, Larisa V., Caiado, Francisco, Garcia-Martin, Santiago, Manz, Eva-Maria, Helbling, Patrick, Takizawa, Hitoshi, Boettcher, Steffen, Al-Shahrour, Fatima, Nombela-Arrieta, Cesar, Slack, Emma, Manz, Markus G.

Source: Blood. 139(1):44-58

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100183242440.0x000001&indx=1&recIds=ETOCvdc_100183242440.0x000001

Activity interference in patients with Sjögren's syndrome: a cross-sectional study of 149 patients in the UK

Authors: Schoon, Hannah, Slack, Emma, Pearce, Mark, Ng, Wan-Fai, Hackett, Katie L

Source: Rheumatology. 61(10):4065-4075

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100163923012.0x000001&indx=1&recIds=ETOCvdc_100163923012.0x000001

Sublethal systemic LPS in mice enables gut-luminal pathogens to bloom through oxygen species-mediated microbiota inhibition.

Authors: Kroon, Sanne, Malcic, Dejan, Weidert, Lena, Bircher, Lea, Boldt, Leonardo, Christen, Philipp, Kiefer, Patrick, Sintsova, Anna, Nguyen, Bidong D., Barthel, Manja, Steiger, Yves, Clerc, Melanie, Herzog, Mathias K.-M., Chen, Carmen, Gül, Ersin, Guery, Benoit, Slack, Emma, Sunagawa, Shinichi, Vorholt, Julia A., Maier, Lisa

Source: Nature Communications; 3/21/2025, Vol. 16 Issue 1, p1-18, 18p

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Diagnosing and engineering gut microbiomes.

Authors: Cappio Barazzone, Elisa, Diard, Médéric, Hug, Isabelle, Larsson, Louise, Slack, Emma

Source: EMBO Molecular Medicine; Nov2024, Vol. 16 Issue 11, p2660-2677, 18p

Intestinal epithelial NAIP/NLRC4 restricts systemic dissemination of the adapted pathogen Salmonella Typhimurium due to site-specific bacterial PAMP expression

Authors: Hausmann, Annika, Böck, Desirée, Geiser, Petra, Berthold, Dorothée L., Fattinger, Stefan A., Furter, Markus, Bouman, Judith A., Barthel-Scherrer, Manja, Lang, Crispin M., Bakkeren, Erik, Kolinko, Isabel, Diard, Médéric, Bumann, Dirk, Slack, Emma, Regoes, Roland R., Pilhofer, Martin, Sellin, Mikael E., Hardt, Wolf-Dietrich

Source: In Mucosal Immunology 1 May 2020 13(3):530-544

Microbiota-derived peptide mimics drive lethal inflammatory cardiomyopathy

Authors: Gil-Cruz, Cristina, Perez-Shibayama, Christian, De Martin, Angelina, Ronchi, Francesca, van der Borght, Katrien, Niederer, Rebekka, Onder, Lucas, Lütge, Mechthild, Novkovic, Mario, Nindl, Veronika, Ramos, Gustavo, Arnoldini, Markus, Slack, Emma M.C., Boivin-Jahns, Valérie, Jahns, Roland, Wyss, Madeleine, Mooser, Catherine, Lambrecht, Bart N., Maeder, Micha T., Rickli, Hans, Flatz, Lukas, Eriksson, Urs, Geuking, Markus B., McCoy, Kathy D., Ludewig, Burkhard

Source: Science, 2019 Nov . 366(6467), 881-886.

Access URL: https://www.jstor.org/stable/26845226

The antibody/microbiota interface in health and disease

Authors: Sterlin, Delphine, Fadlallah, Jehane, Slack, Emma, Gorochov, Guy

Source: In Mucosal Immunology January 2020 13(1):3-11

IgA and the intestinal microbiota: the importance of being specific

Authors: Pabst, Oliver, Slack, Emma

Source: In Mucosal Immunology January 2020 13(1):12-21

Mucispirillum schaedleri Antagonizes Salmonella Virulence to Protect Mice against Colitis

Authors: Herp, Simone, Brugiroux, Sandrine, Garzetti, Debora, Ring, Diana, Jochum, Lara M., Beutler, Markus, Eberl, Claudia, Hussain, Saib, Walter, Steffi, Gerlach, Roman G., Ruscheweyh, Hans J., Huson, Daniel, Sellin, Mikael E., Slack, Emma, Hanson, Buck, Loy, Alexander, Baines, John F., Rausch, Philipp, Basic, Marijana, Bleich, André, Berry, David, Stecher, Bärbel

Source: In Cell Host & Microbe 8 May 2019 25(5):681-694

Growing, evolving and sticking in a flowing environment: understanding IgA interactions with bacteria in the gut

Authors: Hoces, Daniel, Arnoldini, Markus, Diard, Médéric, Loverdo, Claude, Slack, Emma

Source: Immunology. 159(1):52-62

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100103107152.0x000001&indx=1&recIds=ETOCvdc_100103107152.0x000001

Computational framework for the generation of one‐dimensional vascular models accounting for uncertainty in networks extracted from medical images.

Authors: Bartolo, Michelle A., Taylor‐LaPole, Alyssa M., Gandhi, Darsh, Johnson, Alexandria, Li, Yaqi, Slack, Emma, Stevens, Isaiah, Turner, Zachary G., Weigand, Justin D., Puelz, Charles, Husmeier, Dirk, Olufsen, Mette S.

Source: Journal of Physiology; Aug2024, Vol. 602 Issue 16, p3929-3954, 26p

Subject Terms: DIAGNOSTIC imaging, SHEARING force, VASCULAR resistance, HEMODYNAMICS, VASCULAR remodeling