Large scale analysis of the SARS-CoV-2 main protease reveals marginal presence of nirmatrelvir-resistant SARS-CoV-2 Omicron mutants in Ontario, Canada, December 2021-September 2023.

Authors: Duvvuri, Venkata, Shire, Fatima, Isabel, Sandra, Braukmann, Thomas, Clark, Shawn, Marchand-Austin, Alex, Eshaghi, Alireza, Bandukwala, Hina, Varghese, Nobish, Ye Li, Sivaraman, Karthikeyan, Hussain, Hadia, Cronin, Kirby, Sullivan, Ashleigh, Aimin Li, Zygmunt, Austin, Ramotar, Karam, Kus, Julianne, Hasso, Maan, Corbeil, Antoine

Source: Canada Communicable Disease Report; Oct2024, Vol. 50 Issue 10, p365-374, 10p

Subject Terms: SARS-CoV-2 Omicron variant, SARS-CoV-2, COVID-19 pandemic, COVID-19 treatment, DATABASES

Are shed hair genomes the most effective noninvasive resource for estimating relationships in the wild?

Authors: Khan, Anubhab, Patel, Kaushalkumar, Bhattacharjee, Subhadeep, Sharma, Sudarshan, Chugani, Anup N., Sivaraman, Karthikeyan, Hosawad, Vinayak, Sahu, Yogesh Kumar, Reddy, Goddilla V., Ramakrishnan, Uma

Source: Ecology and evolution. 10(11):4583-4594

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100107471637.0x000001&indx=1&recIds=ETOCvdc_100107471637.0x000001

Metabolite systems profiling identifies exploitable weaknesses in retinoblastoma

Authors: Sahoo, Swagatika, Ravi Kumar, Ranjith Kumar, Nicolay, Brandon, Mohite, Omkar, Sivaraman, Karthikeyan, Khetan, Vikas, Rishi, Pukhraj, Ganesan, Suganeswari, Subramanyan, Krishnakumar, Raman, Karthik, Miles, Wayne, Elchuri, Sailaja V.

Source: FEBS letters. 593(1):23-41

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100083709939.0x000001&indx=1&recIds=ETOCvdc_100083709939.0x000001

Detection of the novel SARS-CoV-2 European lineage B.1.177 in Ontario, Canada

Authors: Guthrie, Jennifer L., Teatero, Sarah, Zittermann, Sandra, Chen, Yao, Sullivan, Ashleigh, Rilkoff, Heather, Joshi, Esha, Sivaraman, Karthikeyan, de Borja, Richard, Sundaravadanam, Yogi, Laszloffy, Michael, Heisler, Lawrence, Allen, Vanessa G., Simpson, Jared T., Fittipaldi, Nahuel

Source: In Journal of Clinical Virology Plus June 2021 1(1-2)

Genome sequencing and analysis reveals possible determinants of Staphylococcus aureus nasal carriage

Authors: Cole Alexander M, Tsai Jennifer, Dewell Scott, Venkataraman Nitya, Sivaraman Karthikeyan

Source: BMC Genomics, Vol 9, Iss 1, p 433 (2008)

Subject Terms: Biotechnology, TP248.13-248.65, Genetics, QH426-470

File Description: electronic resource

Relation: http://www.biomedcentral.com/1471-2164/9/433; https://doaj.org/toc/1471-2164

Access URL: https://doaj.org/article/2c2baff34a6a4c3c9cec49955fd47eeb

Non-coding and Coding Transcriptional Profiles Are Significantly Altered in Pediatric Retinoblastoma Tumors.

Authors: Rajasekaran, Swetha, Nagarajha Selvan, Lakshmi Dhevi, Dotts, Kathleen, Kumar, Ranjith, Rishi, Pukhraj, Khetan, Vikas, Bisht, Madhoolika, Sivaraman, Karthikeyan, Krishnakumar, Subrmanian, Sahoo, Debashis, Campbell, Moray J., Elchuri, Sailaja V., Miles, Wayne O.

Source: Frontiers in Oncology; 4/16/2019, pN.PAG-N.PAG, 12p

Subject Terms: RETINOBLASTOMA, TUMORS in children, TUMOR suppressor genes, GENE expression, BIOMARKERS

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Pathogenesis gene families in the common minimal genome of Staphylococcus aureus are hypervariable

Authors: Sivaraman, Karthikeyan, Cole, Alexander M.

Source: In FEBS Letters 2009 583(8):1304-1308

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Genome sequencing and analysis reveals possible determinants of Staphylococcus aureus nasal carriage.

Authors: Sivaraman, Karthikeyan, Venkataraman, Nitya, Tsai, Jennifer, Dewell, Scott, Cole, Alexander M.

Source: BMC Genomics; 2008, Vol. 9, Special section p1-13, 13p

Subject Terms: STAPHYLOCOCCUS aureus, BACTERIAL genomes, NUCLEOTIDE sequence, GENETIC polymorphisms, GENES

Role of hydrophobic interactions and salt-bridges in β-hairpin folding

Authors: Seshasayee, Aswin, Raghunathan, Krishnan, Sivaraman, Karthikeyan, Pennathur, Gautam

Source: Journal of Molecular Modeling; January 2006, Vol. 12 Issue: 2 p197-204, 8p

Characterization of the yehUT Two-Component Regulatory System of Salmonella enterica Serovar Typhi and Typhimurium.

Authors: Wong, Vanessa K., Pickard, Derek J., Barquist, Lars, Sivaraman, Karthikeyan, Page, Andrew J., Hart, Peter J., Arends, Mark J., Holt, Kathryn E., Kane, Leanne, Mottram, Lynda F., Ellison, Louise, Bautista, Ruben, McGee, Chris J., Kay, Sally J., Wileman, Thomas M., Kenney, Linda J., MacLennan, Calman A., Kingsley, Robert A., Dougan, Gordon

Source: PLoS ONE; Dec2013, Vol. 8 Issue 12, p1-1, 1p

Subject Terms: SALMONELLA enterica, NUCLEOTIDE sequence, GENETIC regulation, MICROBIAL sensitivity tests, PHENOTYPES, GENETIC code, LABORATORY mice