Showing 1 - 20 results of 349 Refine Results
  1. 1
    Conference

    A Fine-tuning Dataset and Benchmark for Large Language Models for Protein Understanding

    Authors: Shen, Yiqing, Chen, Zan, Mamalakis, Michail, He, Luhan, Xia, Haiyang, Li, Tianbin, Su, Yanzhou, He, Junjun, Wang, Yu Guang

    Source: 2024 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) Bioinformatics and Biomedicine (BIBM), 2024 IEEE International Conference on. :2390-2395 Dec, 2024

    Relation: 2024 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)

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  2. 2
    Conference

    LaGDif: Latent Graph Diffusion Model for Efficient Protein Inverse Folding with Self-Ensemble

    Authors: Wu, Taoyu, Wang, Yu Guang, Shen, Yiqing

    Source: 2024 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) Bioinformatics and Biomedicine (BIBM), 2024 IEEE International Conference on. :3850-3855 Dec, 2024

    Relation: 2024 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)

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  3. 3
    Conference

    Virtual Doctor: The role, responsibilities, and counterparts of the general medical AI

    Authors: Carbonell, Eduard Lloret, Huang, Jiaxuan, Shen, Yiqing, Ke, Jing

    Source: 2024 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) Bioinformatics and Biomedicine (BIBM), 2024 IEEE International Conference on. :6984-6989 Dec, 2024

    Relation: 2024 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)

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  4. 4
    Conference

    Segment Any Nuclei: A Prompt-free Segment Anything Model for Nuclei from Histology Image

    Authors: Sun, Xutao, Liu, Junwen, Ren, Yonggong, Xu, Xiaolu, Shen, Yiqing

    Source: 2024 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) Bioinformatics and Biomedicine (BIBM), 2024 IEEE International Conference on. :3726-3730 Dec, 2024

    Relation: 2024 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)

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  5. 5
    Conference

    A Regressor-Guided Graph Diffusion Model for Predicting Enzyme Mutations to Enhance Turnover Number

    Authors: Yu, Xiaozhu, Yi, Kai, Wang, Yu Guang, Shen, Yiqing

    Source: 2024 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) Bioinformatics and Biomedicine (BIBM), 2024 IEEE International Conference on. :3943-3948 Dec, 2024

    Relation: 2024 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)

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  6. 6
    Conference

    TourSynbio: A Multi-Modal Large Model and Agent Framework to Bridge Text and Protein Sequences for Protein Engineering

    Authors: Shen, Yiqing, Chen, Zan, Mamalakis, Michail, Liu, Yungeng, Li, Tianbin, Su, Yanzhou, He, Junjun, Lio, Pietro, Wang, Yu Guang

    Source: 2024 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) Bioinformatics and Biomedicine (BIBM), 2024 IEEE International Conference on. :2382-2389 Dec, 2024

    Relation: 2024 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)

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  7. 7
    Conference

    A Tiny Efficient U-Net with Gated Linear Attention for Medical Image Segmentation

    Authors: Ju, Sibo, Chen, Zhaozhen, Liao, Xiangwen, Shen, Yiqing, He, Junjun, Su, Yanzhou

    Source: 2024 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) Bioinformatics and Biomedicine (BIBM), 2024 IEEE International Conference on. :3367-3371 Dec, 2024

    Relation: 2024 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)

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  8. 8
    Conference

    TourSynbio-Search: A Large Language Model Driven Agent Framework for Unified Search Method for Protein Engineering

    Authors: Liu, Yungeng, Chen, Zan, Wang, Yu Guang, Shen, Yiqing

    Source: 2024 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) Bioinformatics and Biomedicine (BIBM), 2024 IEEE International Conference on. :5395-5400 Dec, 2024

    Relation: 2024 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)

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  9. 9
    Conference

    Validation of an LLM-based Multi-Agent Framework for Protein Engineering in Dry Lab and Wet Lab

    Authors: Chen, Zan, Liu, Yungeng, Wang, Yu Guang, Shen, Yiqing

    Source: 2024 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) Bioinformatics and Biomedicine (BIBM), 2024 IEEE International Conference on. :5364-5370 Dec, 2024

    Relation: 2024 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)

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  10. 10
    Conference

    Edge-SAN: An Edge-Prompted Foundation Model for Accurate Nuclei Instance Segmentation in Histology Images

    Authors: Wu, Xuening, Shen, Yiqing, Zhao, Qing, Kang, Yanlan, Hu, Ruiqi, Zhang, Wenqiang

    Source: 2024 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) Bioinformatics and Biomedicine (BIBM), 2024 IEEE International Conference on. :2694-2701 Dec, 2024

    Relation: 2024 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)

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  11. 11
    Conference

    TPC-GNN: A Three-Level Hierarchical Graph Neural Network for Microsatellite Instability Prediction from Histopathology Whole Slide Images

    Authors: Zhang, Hang, Xu, Xueru, Wang, Guoyou, Shen, Yiqing

    Source: 2024 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) Bioinformatics and Biomedicine (BIBM), 2024 IEEE International Conference on. :2880-2887 Dec, 2024

    Relation: 2024 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)

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  12. 12
    Conference

    FalconProtein: Finetuning Falcon Foundation Model for Protein Engineering

    Authors: Yang, Wenjun, Shen, Yiqing, Wang, Zehong, Zhao, Rui, Lu, Qitong, Liu, Xinsheng, Liu, Yungeng, Debbah, Merouane, Wang, Yu Guang, Li Wang, Shir

    Source: 2024 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) Bioinformatics and Biomedicine (BIBM), 2024 IEEE International Conference on. :5409-5417 Dec, 2024

    Relation: 2024 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)

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  13. 13
    Report

    FinSphere: A Conversational Stock Analysis Agent Equipped with Quantitative Tools based on Real-Time Database

    Authors: Han, Shijie, Zhou, Changhai, Shen, Yiqing, Sun, Tianning, Zhou, Yuhua, Wang, Xiaoxia, Yang, Zhixiao, Zhang, Jingshu, Li, Hongguang

    Subject Terms: Computer Science - Artificial Intelligence, Computer Science - Computation and Language, Computer Science - Information Retrieval, Quantitative Finance - Computational Finance

    Access URL: http://arxiv.org/abs/2501.12399

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  14. 14
    Conference

    Diffimpute: Tabular Data Imputation with Denoising Diffusion Probabilistic Model

    Authors: Wen, Yizhu, Wang, Yiwei, Yi, Kai, Ke, Jing, Shen, Yiqing

    Source: 2024 IEEE International Conference on Multimedia and Expo (ICME) Multimedia and Expo (ICME), 2024 IEEE International Conference on. :1-6 Jul, 2024

    Relation: 2024 IEEE International Conference on Multimedia and Expo (ICME)

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  15. 15
    Report

    An Intrinsically Explainable Approach to Detecting Vertebral Compression Fractures in CT Scans via Neurosymbolic Modeling

    Authors: Inigo, Blanca, Shen, Yiqing, Killeen, Benjamin D., Song, Michelle, Krieger, Axel, Bradley, Christopher, Unberath, Mathias

    Subject Terms: Computer Science - Machine Learning, Computer Science - Computer Vision and Pattern Recognition, Electrical Engineering and Systems Science - Image and Video Processing

    Access URL: http://arxiv.org/abs/2412.17258

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  16. 16
    Report

    Memorizing SAM: 3D Medical Segment Anything Model with Memorizing Transformer

    Authors: Shao, Xinyuan, Shen, Yiqing, Unberath, Mathias

    Subject Terms: Computer Science - Computer Vision and Pattern Recognition

    Access URL: http://arxiv.org/abs/2412.13908

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  17. 17
    Report

    An Agent Framework for Real-Time Financial Information Searching with Large Language Models

    Authors: Li, Jinzheng, Zhang, Jingshu, Li, Hongguang, Shen, Yiqing

    Subject Terms: Computer Science - Information Retrieval, Computer Science - Artificial Intelligence

    Access URL: http://arxiv.org/abs/2502.15684

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  18. 18
    Report

    AutoProteinEngine: A Large Language Model Driven Agent Framework for Multimodal AutoML in Protein Engineering

    Authors: Liu, Yungeng, Chen, Zan, Wang, Yu Guang, Shen, Yiqing

    Subject Terms: Quantitative Biology - Quantitative Methods

    Access URL: http://arxiv.org/abs/2411.04440

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  19. 19
    Conference

    A Retinex Structure-based Low-light Enhancement Model Guided by Spatial Consistency

    Authors: Zhang, Miao, Shen, Yiqing, Li, Zhuowei, Pan, Guofeng, Lu, Shuai

    Source: 2024 IEEE International Conference on Robotics and Automation (ICRA) Robotics and Automation (ICRA), 2024 IEEE International Conference on. :2154-2161 May, 2024

    Relation: 2024 IEEE International Conference on Robotics and Automation (ICRA)

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  20. 20
    Report

    DiffuseReg: Denoising Diffusion Model for Obtaining Deformation Fields in Unsupervised Deformable Image Registration

    Authors: Zhuo, Yongtai, Shen, Yiqing

    Subject Terms: Computer Science - Computer Vision and Pattern Recognition

    Access URL: http://arxiv.org/abs/2410.05234

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