homeRNA self-blood collection enables high-frequency temporal profiling of presymptomatic host immune kinetics to respiratory viral infection: a prospective cohort study

Authors: Lim, Fang Yun ^{a, b}, Lea, Hannah G. ^{b, c}, Dostie, Ashley M. ^b, Kim, Soo-Young ^a, van Neel, Tammi L. ^b, Hassan, Grant W. ^b, Takezawa, Meg G. ^b, Starita, Lea M. ^{d, e}, Adams, Karen N. ^{b, f}, Boeckh, Michael ^{a, g}, Schiffer, Joshua T. ^{a, g}, Hyrien, Ollivier ^a, Waghmare, Alpana ^{a, h, i, ∗∗∗}, Berthier, Erwin ^{b, ∗∗}, Theberge, Ashleigh B. ^{b, j, ∗}

Source: In eBioMedicine February 2025 112

Durability of COVID-19 vaccine and infection induced immunity: A systematic review and meta-regression analysis

Authors: Moore, Mia ^⁎, Anderson, Larissa, Schiffer, Joshua T., Matrajt, Laura, Dimitrov, Dobromir

Source: In Vaccine 30 April 2025 54

Meeting report of the 37th International Conference on Antiviral Research in Gold Coast, Australia, May 20–24, 2024, organized by the International Society for Antiviral Research

Authors: Welch, Stephen R. ^{a, ⁎}, Bilello, John P. ^b, Carter, Kara ^c, Delang, Leen ^d, Dirr, Larissa ^e, Durantel, David ^f, Feng, Joy Y. ^g, Gowen, Brian B. ^h, Herrero, Lara J. ^e, Janeba, Zlatko ⁱ, Kleymann, Gerald ^j, Lee, Alpha A. ^k, Meier, Chris ^l, Moffat, Jennifer ^m, Schang, Luis M. ⁿ, Schiffer, Joshua T. ^{o, p}, Seley-Radtke, Katherine L. ^q, Sheahan, Timothy P. ^{r, s, t}, Spengler, Jessica R. ^{a, ⁎}

Source: In Antiviral Research December 2024 232

Stochastic fate decisions of HSCs after transplantation: early contribution, symmetric expansion, and pool formation

Authors: Radtke, Stefan, Enstrom, Mark, Pande, Dnyanada, Duke, Elizabeth R., Cardozo-Ojeda, E. Fabian, Madhu, Ravishankar, Owen, Staci, Kanestrom, Greta, Cui, Margaret, Perez, Anai M., Schiffer, Joshua T., Kiem, Hans-Peter

Source: In Blood 6 July 2023 142(1):33-43

Evolution during primary HIV infection does not require adaptive immune selection

Authors: Swan, David A., Rolland, Morgane, Herbeck, Joshua T., Schiffer, Joshua T., Reeves, Daniel B.

Source: Proceedings of the National Academy of Sciences of the United States of America, 2022 Feb . 119(7), 1-10.

Access URL: https://www.jstor.org/stable/27118583

Substantial uneven proliferation of CD4+ T cells during recovery from acute HIV infection is sufficient to explain the observed expanded clones in the HIV reservoir

Authors: Tettamanti Boshier, Florencia A., Reeves, Daniel B., Duke, Elizabeth R., Swan, David A., Prlic, Martin, Cardozo-Ojeda, E. Fabian, Schiffer, Joshua T.

Source: In Journal of Virus Eradication December 2022 8(4)

Modeling explains prolonged SARS-CoV-2 nasal shedding relative to lung shedding in remdesivir-treated rhesus macaques

Authors: Goyal, Ashish ^{1, 4}, Duke, Elizabeth R. ^{1, 2}, Cardozo-Ojeda, E. Fabian ^{1, 5}, Schiffer, Joshua T. ^{1, 2, 3, 5, 6, ∗}

Source: In iScience 17 June 2022 25(6)

HIV reservoir quantification using cross-subtype multiplex ddPCR

Authors: Cassidy, Noah A.J., Fish, Carolyn S., Levy, Claire N., Roychoudhury, Pavitra, Reeves, Daniel B., Hughes, Sean M., Schiffer, Joshua T., Benki-Nugent, Sarah, John-Stewart, Grace, Wamalwa, Dalton, Jerome, Keith R., Overbaugh, Julie, Hladik, Florian, Lehman, Dara A.

Source: In iScience 21 January 2022 25(1)

Cytomegalovirus-specific T-cell reconstitution following letermovir prophylaxis after hematopoietic cell transplantation

Authors: Zamora, Danniel, Duke, Elizabeth R., Xie, Hu, Edmison, Bradley C., Akoto, Brenda, Kiener, Richard, Stevens-Ayers, Terry, Wagner, Ralf, Mielcarek, Marco, Leisenring, Wendy M., Jerome, Keith R., Schiffer, Joshua T., Finak, Greg, De Rosa, Stephen C., Boeckh, Michael ^*

Source: In Blood 8 July 2021 138(1):34-43

A highly multiplexed droplet digital PCR assay to measure the intact HIV-1 proviral reservoir

Authors: Levy, Claire N., Hughes, Sean M., Roychoudhury, Pavitra, Reeves, Daniel B., Amstuz, Chelsea, Zhu, Haiying, Huang, Meei-Li, Wei, Yulun, Bull, Marta E., Cassidy, Noah A.J., McClure, Jan, Frenkel, Lisa M., Stone, Mars, Bakkour, Sonia, Wonderlich, Elizabeth R., Busch, Michael P., Deeks, Steven G., Schiffer, Joshua T., Coombs, Robert W., Lehman, Dara A., Jerome, Keith R., Hladik, Florian

Source: In Cell Reports Medicine 20 April 2021 2(4)

Hydroxychloroquine with or without azithromycin for treatment of early SARS-CoV-2 infection among high-risk outpatient adults: A randomized clinical trial

Authors: Johnston, Christine, Brown, Elizabeth R., Stewart, Jenell, Karita, Helen C.Stankiewicz, Kissinger, Patricia J., Dwyer, John, Hosek, Sybil, Oyedele, Temitope, Paasche-Orlow, Michael K., Paolino, Kristopher, Heller, Kate B., Leingang, Hannah, Haugen, Harald S., Dong, Tracy Q., Bershteyn, Anna, Sridhar, Arun R., Poole, Jeanne, Noseworthy, Peter A., Ackerman, Michael J., Morrison, Susan, Greninger, Alexander L., Huang, Meei-Li, Jerome, Keith R., Wener, Mark H., Wald, Anna, Schiffer, Joshua T., Celum, Connie, Chu, Helen Y., Barnabas, Ruanne V., Baeten, Jared M.

Source: In EClinicalMedicine March 2021 33

Widespread testing, case isolation and contact tracing may allow safe school reopening with continued moderate physical distancing: A modeling analysis of King County, WA data

Authors: Bracis, Chloe, Burns, Eileen, Moore, Mia, Swan, David, Reeves, Daniel B., Schiffer, Joshua T., Dimitrov, Dobromir

Source: In Infectious Disease Modelling 2021 6:24-35

Ensemble modeling of SARS-CoV-2 immune dynamics in immunologically naïve rhesus macaques predicts that potent, early innate immune responses drive viral elimination.

Authors: Byrne, Catherine, Schiffer, Joshua T.

Source: Frontiers in Immunology; 2024, p1-16, 16p

Subject Terms: RHESUS monkeys, ECOLOGICAL forecasting, ANTIBODY formation, VIRAL load, T cells

Highly Heterogeneous Kaposi Sarcoma–Associated Herpesvirus Oral Shedding Kinetics Among People With and Without Kaposi Sarcoma and Human Immunodeficiency Virus Coinfection.

Authors: Krantz, Elizabeth M, Mutyaba, Innocent, Nankoma, Janet, Okuku, Fred, Casper, Corey, Orem, Jackson, Swan, David A, Phipps, Warren, Schiffer, Joshua T

Source: Open Forum Infectious Diseases; Oct2024, Vol. 11 Issue 10, p1-9, 9p

Subject Terms: HIV, VIRAL load, KAPOSI'S sarcoma, VIRAL shedding, POLYMERASE chain reaction

In the Eye of the Beholder : A Conjunctival Lesion in a Woman With Acute Myelogenous Leukemia

Authors: McGuffin, Sarah A., Bharadwaj, Rajnish, Gonzalez-Cuyar, Luis F., Schiffer, Joshua T., Stacey, Andrew W., Walter, Roland B., Duke, Elizabeth R.

Source: Clinical Infectious Diseases, 2019 Feb 01. 68(3), 527-529.

Access URL: https://www.jstor.org/stable/26621286

Reply to Giménez et al

Authors: Hill, Joshua A., Mayer, Bryan T., Xie, Hu, Leisenring, Wendy M., Boeckh, Michael, Schiffer, Joshua T.

Source: Clinical Infectious Diseases, 2018 Sep 01. 67(5), 807-808.

Access URL: https://www.jstor.org/stable/26526727

Biologic interactions between HSV-2 and HIV-1 and possible implications for HSV vaccine development

Authors: Schiffer, Joshua T., Gottlieb, Sami L.

Source: Vaccine. 37(50):7363-7371

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100093080531.0x000001&indx=1&recIds=ETOCvdc_100093080531.0x000001

Review of mathematical models of HSV-2 vaccination: Implications for vaccine development

Authors: Spicknall, Ian H., Looker, Katharine J., Gottlieb, Sami L., Chesson, Harrell W., Schiffer, Joshua T., Elmes, Jocelyn, Boily, Marie-Claude

Source: Vaccine. 37(50):7396-7407

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100093080492.0x000001&indx=1&recIds=ETOCvdc_100093080492.0x000001

Kinetics of Double-Stranded DNA Viremia After Allogeneic Hematopoietic Cell Transplantation

Authors: Hill, Joshua A., Mayer, Bryan T., Xie, Hu, Leisenring, Wendy M., Huang, Meei-Li, Stevens-Ayers, Terry, Milano, Filippo, Delaney, Colleen, Jerome, Keith R., Zerr, Danielle M., Nichols, Garrett, Boeckh, Michael, Schiffer, Joshua T.

Source: Clinical Infectious Diseases, 2018 Feb 01. 66(3), 368-375.

Access URL: https://www.jstor.org/stable/26525996

Effect of HSV-2 infection on subsequent HIV acquisition: an updated systematic review and meta-analysis

Authors: Looker, Katharine J, Elmes, Jocelyn A R, Gottlieb, Sami L, Schiffer, Joshua T, Vickerman, Peter, Turner, Katherine M E, Boily, Marie-Claude

Source: In The Lancet Infectious Diseases December 2017 17(12):1303-1316