Randomized feature selection based semi-supervised latent Dirichlet allocation for microbiome analysis

Authors: Namitha Pais, Nalini Ravishanker, Sanguthevar Rajasekaran, George Weinstock, Dong-Binh Tran

Source: Scientific Reports, Vol 14, Iss 1, Pp 1-10 (2024)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: https://doaj.org/toc/2045-2322

Access URL: https://doaj.org/article/2d0983a3aa2b4f178c3bac84f91489a7

Semi-Supervised Machine Learning for Fault Detection and Diagnosis of a Rooftop Unit

Authors: Mohammed G. Albayati, Jalal Faraj, Amy Thompson, Prathamesh Patil, Ravi Gorthala, Sanguthevar Rajasekaran

Source: Big Data Mining and Analytics, Vol 6, Iss 2, Pp 170-184 (2023)

Subject Terms: semi-supervised machine learning, fault classification, fault detection and diagnostics, heating, ventilation, and air-conditioning, data-driven modeling, energy efficiency, Electronic computers. Computer science, QA75.5-76.95

File Description: electronic resource

Relation: https://www.sciopen.com/article/10.26599/BDMA.2022.9020015; https://doaj.org/toc/2096-0654

Access URL: https://doaj.org/article/1bf1ede38a0f4fc780b99a9c0ab8c9bc

A fast privacy-preserving patient record linkage of time series data

Authors: Ahmed Soliman, Sanguthevar Rajasekaran, Patrick Toman, Nalini Ravishanker

Source: Scientific Reports, Vol 13, Iss 1, Pp 1-10 (2023)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: https://doaj.org/toc/2045-2322

Access URL: https://doaj.org/article/9629d384bb6943ff9ec05b8f7842900f

Supervised Dynamic Correlated Topic Model for Classifying Categorical Time Series

Authors: Namitha Pais, Nalini Ravishanker, Sanguthevar Rajasekaran

Source: Algorithms, Vol 17, Iss 7, p 275 (2024)

Subject Terms: classification, promoter sequence identification, time series, topic model, Industrial engineering. Management engineering, T55.4-60.8, Electronic computers. Computer science, QA75.5-76.95

File Description: electronic resource

Relation: https://www.mdpi.com/1999-4893/17/7/275; https://doaj.org/toc/1999-4893

Access URL: https://doaj.org/article/432cecd13ea0407781bbe790bb4c79e3

Latent Autoregressive Student-t Prior Process Models to Assess Impact of Interventions in Time Series

Authors: Patrick Toman, Nalini Ravishanker, Nathan Lally, Sanguthevar Rajasekaran

Source: Future Internet, Vol 16, Iss 1, p 8 (2023)

Subject Terms: Gaussian process regression, Student-t process, impact of interventions, IoT sensor data, time series analysis, variational inference, Information technology, T58.5-58.64

File Description: electronic resource

Relation: https://www.mdpi.com/1999-5903/16/1/8; https://doaj.org/toc/1999-5903

Access URL: https://doaj.org/article/8b3366e637ea4f03b40f6b8ad12a5a8d

A robust and stable gene selection algorithm based on graph theory and machine learning

Authors: Subrata Saha, Ahmed Soliman, Sanguthevar Rajasekaran

Source: Human Genomics, Vol 15, Iss 1, Pp 1-16 (2021)

Subject Terms: Robust and Stable Gene Selection Algorithm (RSGSA), Symmetric Uncertainty (SU), Gain ratio (GR), Support vector machine-recursive feature elimination (SVM-RFE), Linear Support Vector Machine (LSVM), Medicine, Genetics, QH426-470

File Description: electronic resource

Relation: https://doaj.org/toc/1479-7364

Access URL: https://doaj.org/article/21e4f9da095a4dce8150adf6a5967f79

Novel and Efficient Randomized Algorithms for Feature Selection

Authors: Zigeng Wang, Xia Xiao, Sanguthevar Rajasekaran

Source: Big Data Mining and Analytics, Vol 3, Iss 3, Pp 208-224 (2020)

Subject Terms: feature selection, randomized algorithms, efficient selection, Electronic computers. Computer science, QA75.5-76.95

File Description: electronic resource

Relation: https://www.sciopen.com/article/10.26599/BDMA.2020.9020005; https://doaj.org/toc/2096-0654

Access URL: https://doaj.org/article/84ef381e566e41bebf74107fc29eb08a

Novel algorithms for LDD motif search

Authors: Peng Xiao, Martin Schiller, Sanguthevar Rajasekaran

Source: BMC Genomics, Vol 20, Iss S5, Pp 1-8 (2019)

Subject Terms: Motif search, Radix sort, Neighborhood tree, Biotechnology, TP248.13-248.65, Genetics, QH426-470

File Description: electronic resource

Relation: http://link.springer.com/article/10.1186/s12864-019-5701-6; https://doaj.org/toc/1471-2164

Access URL: https://doaj.org/article/79efb831c0d84644a273bdf1a0a0220a

Automatic subject-specific spatiotemporal feature selection for subject-independent affective BCI.

Authors: Badar Almarri, Sanguthevar Rajasekaran, Chun-Hsi Huang

Source: PLoS ONE, Vol 16, Iss 8, p e0253383 (2021)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: https://doaj.org/toc/1932-6203

Access URL: https://doaj.org/article/b153b040d3fa4a59a4b8f128d6a55bd8

On String Matching with Mismatches

Authors: Marius Nicolae, Sanguthevar Rajasekaran

Source: Algorithms, Vol 8, Iss 2, Pp 248-270 (2015)

Subject Terms: pattern matching with mismatches, kmismatches problem, approximate counting of mismatches, Industrial engineering. Management engineering, T55.4-60.8, Electronic computers. Computer science, QA75.5-76.95

File Description: electronic resource

Relation: http://www.mdpi.com/1999-4893/8/2/248; https://doaj.org/toc/1999-4893

Access URL: https://doaj.org/article/cdd6201d89554ed1989ca0d50799ea44

PMS6MC: A Multicore Algorithm for Motif Discovery

Authors: Shibdas Bandyopadhyay, Sartaj Sahni, Sanguthevar Rajasekaran

Source: Algorithms, Vol 6, Iss 4, Pp 805-823 (2013)

Subject Terms: planted motif search, parallel string algorithms, multi-core algorithms, Industrial engineering. Management engineering, T55.4-60.8, Electronic computers. Computer science, QA75.5-76.95

File Description: electronic resource

Relation: http://www.mdpi.com/1999-4893/6/4/805; https://doaj.org/toc/1999-4893

Access URL: https://doaj.org/article/5cb2223f74474e9fb8fd1174471b443e

The Functional Human C-Terminome.

Authors: Surbhi Sharma, Oniel Toledo, Michael Hedden, Kenneth F Lyon, Steven B Brooks, Roxanne P David, Justin Limtong, Jacklyn M Newsome, Nemanja Novakovic, Sanguthevar Rajasekaran, Vishal Thapar, Sean R Williams, Martin R Schiller

Source: PLoS ONE, Vol 11, Iss 4, p e0152731 (2016)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: http://europepmc.org/articles/PMC4822787?pdf=render; https://doaj.org/toc/1932-6203

Access URL: https://doaj.org/article/f8226a89c1b7496c8e82ecabda6af2d5

Efficient Record Linkage Algorithms Using Complete Linkage Clustering.

Authors: Abdullah-Al Mamun, Robert Aseltine, Sanguthevar Rajasekaran

Source: PLoS ONE, Vol 11, Iss 4, p e0154446 (2016)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: http://europepmc.org/articles/PMC4849582?pdf=render; https://doaj.org/toc/1932-6203

Access URL: https://doaj.org/article/ba3109008c924e5bad8c557e2a8149bf

RLT-S: A Web System for Record Linkage.

Authors: Abdullah-Al Mamun, Robert Aseltine, Sanguthevar Rajasekaran

Source: PLoS ONE, Vol 10, Iss 5, p e0124449 (2015)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: http://europepmc.org/articles/PMC4420456?pdf=render; https://doaj.org/toc/1932-6203

Access URL: https://doaj.org/article/11d14e63044a45878ab86b38c050f053

PMS: a panoptic motif search tool.

Authors: Hieu Dinh, Sanguthevar Rajasekaran

Source: PLoS ONE, Vol 8, Iss 12, p e80660 (2013)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: http://europepmc.org/articles/PMC3851466?pdf=render; https://doaj.org/toc/1932-6203

Access URL: https://doaj.org/article/e1028fe956ae4ec2a404ca8f2d943c72

Secondary structure, a missing component of sequence-based minimotif definitions.

Authors: David P Sargeant, Michael R Gryk, Mark W Maciejewski, Vishal Thapar, Vamsi Kundeti, Sanguthevar Rajasekaran, Pedro Romero, Keith Dunker, Shun-Cheng Li, Tomonori Kaneko, Martin R Schiller

Source: PLoS ONE, Vol 7, Iss 12, p e49957 (2012)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: http://europepmc.org/articles/PMC3517595?pdf=render; https://doaj.org/toc/1932-6203

Access URL: https://doaj.org/article/207e0e8e296d417890618a9e282cf5c8

qPMS7: a fast algorithm for finding (ℓ, d)-motifs in DNA and protein sequences.

Authors: Hieu Dinh, Sanguthevar Rajasekaran, Jaime Davila

Source: PLoS ONE, Vol 7, Iss 7, p e41425 (2012)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/22848493/pdf/?tool=EBI; https://doaj.org/toc/1932-6203

Access URL: https://doaj.org/article/34be10bd78cf4c7a8ccf4cb71dea0936

Achieving high accuracy prediction of minimotifs.

Authors: Tian Mi, Sanguthevar Rajasekaran, Jerlin Camilus Merlin, Michael Gryk, Martin R Schiller

Source: PLoS ONE, Vol 7, Iss 9, p e45589 (2012)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: http://europepmc.org/articles/PMC3459956?pdf=render; https://doaj.org/toc/1932-6203

Access URL: https://doaj.org/article/929b229410c54648a3944e403fd109ea

Reducing false-positive prediction of minimotifs with a genetic interaction filter.

Authors: Jerlin C Merlin, Sanguthevar Rajasekaran, Tian Mi, Martin R Schiller

Source: PLoS ONE, Vol 7, Iss 3, p e32630 (2012)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: http://europepmc.org/articles/PMC3293834?pdf=render; https://doaj.org/toc/1932-6203

Access URL: https://doaj.org/article/9f68e7cb250d44b297be6459fb1df16f

Partitioning of minimotifs based on function with improved prediction accuracy.

Authors: Sanguthevar Rajasekaran, Tian Mi, Jerlin Camilus Merlin, Aaron Oommen, Patrick Gradie, Martin R Schiller

Source: PLoS ONE, Vol 5, Iss 8, p e12276 (2010)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: http://europepmc.org/articles/PMC2924378?pdf=render; https://doaj.org/toc/1932-6203

Access URL: https://doaj.org/article/f3507b8b2aca45fc930a46fabaf5c910