The evolution and international spread of extensively drug resistant Shigella sonnei

Authors: Lewis C. E. Mason, David R. Greig, Lauren A. Cowley, Sally R. Partridge, Elena Martinez, Grace A. Blackwell, Charlotte E. Chong, P. Malaka De Silva, Rebecca J. Bengtsson, Jenny L. Draper, Andrew N. Ginn, Indy Sandaradura, Eby M. Sim, Jonathan R. Iredell, Vitali Sintchenko, Danielle J. Ingle, Benjamin P. Howden, Sophie Lefèvre, Elisabeth Njamkepo, François-Xavier Weill, Pieter-Jan Ceyssens, Claire Jenkins, Kate S. Baker

Source: Nature Communications, Vol 14, Iss 1, Pp 1-12 (2023)

Subject Terms: Science

File Description: electronic resource

Relation: https://doaj.org/toc/2041-1723

Access URL: https://doaj.org/article/903be358a29547c2aff2a14b03f46bbd

Integrative omics identifies conserved and pathogen-specific responses of sepsis-causing bacteria

Authors: Andre Mu, William P. Klare, Sarah L. Baines, C. N. Ignatius Pang, Romain Guérillot, Nichaela Harbison-Price, Nadia Keller, Jonathan Wilksch, Nguyen Thi Khanh Nhu, Minh-Duy Phan, Bernhard Keller, Brunda Nijagal, Dedreia Tull, Saravanan Dayalan, Hwa Huat Charlie Chua, Dominik Skoneczny, Jason Koval, Abderrahman Hachani, Anup D. Shah, Nitika Neha, Snehal Jadhav, Sally R. Partridge, Amanda J. Cork, Kate Peters, Olivia Bertolla, Stephan Brouwer, Steven J. Hancock, Laura Álvarez-Fraga, David M. P. De Oliveira, Brian Forde, Ashleigh Dale, Warasinee Mujchariyakul, Calum J. Walsh, Ian Monk, Anna Fitzgerald, Mabel Lum, Carolina Correa-Ospina, Piklu Roy Chowdhury, Robert G. Parton, James De Voss, James Beckett, Francois Monty, Jessica McKinnon, Xiaomin Song, John R. Stephen, Marie Everest, Matt I. Bellgard, Matthew Tinning, Michael Leeming, Dianna Hocking, Leila Jebeli, Nancy Wang, Nouri Ben Zakour, Serhat A. Yasar, Stefano Vecchiarelli, Tonia Russell, Thiri Zaw, Tyrone Chen, Don Teng, Zena Kassir, Trevor Lithgow, Adam Jenney, Jason N. Cole, Victor Nizet, Tania C. Sorrell, Anton Y. Peleg, David L. Paterson, Scott A. Beatson, Jemma Wu, Mark P. Molloy, Anna E. Syme, Robert J. A. Goode, Adam A. Hunter, Grahame Bowland, Nicholas P. West, Marc R. Wilkins, Steven P. Djordjevic, Mark R. Davies, Torsten Seemann, Benjamin P. Howden, Dana Pascovici, Sonika Tyagi, Ralf B. Schittenhelm, David P. De Souza, Malcolm J. McConville, Jonathan R. Iredell, Stuart J. Cordwell, Richard A. Strugnell, Timothy P. Stinear, Mark A. Schembri, Mark J. Walker

Source: Nature Communications, Vol 14, Iss 1, Pp 1-21 (2023)

Subject Terms: Science

File Description: electronic resource

Relation: https://doaj.org/toc/2041-1723

Access URL: https://doaj.org/article/6d65b18b91de403488fe5eca204df6be

Third generation cephalosporins and piperacillin/tazobactam have distinct impacts on the microbiota of critically ill patients

Authors: Hasinika K. A. H. Gamage, Carola Venturini, Sasha G. Tetu, Masrura Kabir, Vineet Nayyar, Andrew N. Ginn, Belinda Roychoudhry, Lee Thomas, Mitchell Brown, Andrew Holmes, Sally R. Partridge, Ian Seppelt, Ian T. Paulsen, Jonathan R. Iredell

Source: Scientific Reports, Vol 11, Iss 1, Pp 1-10 (2021)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: https://doaj.org/toc/2045-2322

Access URL: https://doaj.org/article/89ef1323acf544d9a6dfaafa7d3554be

Co-Occurrence of Multidrug Resistant Klebsiella pneumoniae Pathogenic Clones of Human Relevance in an Equine Pneumonia Case

Authors: Carola Venturini, Bethany Bowring, Sally R. Partridge, Nouri L. Ben Zakour, Alicia Fajardo-Lubian, Ariana Lopez Ayala, Jilong Qin, Makrina Totsika, Gaby van Galen, Jacqueline Norris, Jonathan Iredell

Source: Microbiology Spectrum, Vol 10, Iss 3 (2022)

Subject Terms: Klebsiella pneumoniae, ST307, multidrug resistance, bacteriophages, plasmids, pathogenic clones, Microbiology, QR1-502

File Description: electronic resource

Relation: https://doaj.org/toc/2165-0497

Access URL: https://doaj.org/article/e5ca775725a04b35af5f4367ef588f6b

Author Correction: The evolution and international spread of extensively drug resistant Shigella sonnei

Authors: Lewis C. E. Mason, David R. Greig, Lauren A. Cowley, Sally R. Partridge, Elena Martinez, Grace A. Blackwell, Charlotte E. Chong, P. Malaka De Silva, Rebecca J. Bengtsson, Jenny L. Draper, Andrew N. Ginn, Indy Sandaradura, Eby M. Sim, Jonathan R. Iredell, Vitali Sintchenko, Danielle J. Ingle, Benjamin P. Howden, Sophie Lefèvre, Elisabeth Njamkepo, François-Xavier Weill, Pieter-Jan Ceyssens, Claire Jenkins, Kate S. Baker

Source: Nature Communications, Vol 14, Iss 1, Pp 1-1 (2023)

Subject Terms: Science

File Description: electronic resource

Relation: https://doaj.org/toc/2041-1723

Access URL: https://doaj.org/article/4c9ad3a1dee04f11960ad1364b3fd23b

Comment on 'Conserved phylogenetic distribution and limited antibiotic resistance of class 1 integrons revealed by assessing the bacterial genome and plasmid collection' by A.N. Zhang et al.

Authors: Paul H. Roy, Sally R. Partridge, Ruth M. Hall

Source: Microbiome, Vol 9, Iss 1, Pp 1-3 (2021)

Subject Terms: Integron, Integrase, Cassette, XerC, Transposon, Microbial ecology, QR100-130

File Description: electronic resource

Relation: https://doaj.org/toc/2049-2618

Access URL: https://doaj.org/article/0583966d0ab047808565552e9399c514

Combining sequencing approaches to fully resolve a carbapenemase-encoding megaplasmid in a Pseudomonas shirazica clinical strain

Authors: João Botelho, Cédric Lood, Sally R. Partridge, Vera van Noort, Rob Lavigne, Filipa Grosso, Luísa Peixe

Source: Emerging Microbes and Infections, Vol 8, Iss 1, Pp 1186-1194 (2019)

Subject Terms: Pseudomonas, megaplasmids, Nanopore, Illumina, antibiotic resistance, Infectious and parasitic diseases, RC109-216, Microbiology, QR1-502

File Description: electronic resource

Relation: https://doaj.org/toc/2222-1751

Access URL: https://doaj.org/article/8d3d14d962e54c879f279e5496f8a384

Emergence of a Plasmid-Encoded Resistance-Nodulation-Division Efflux Pump Conferring Resistance to Multiple Drugs, Including Tigecycline, in Klebsiella pneumoniae

Authors: Luchao Lv, Miao Wan, Chengzhen Wang, Xun Gao, Qiwen Yang, Sally R. Partridge, Yang Wang, Zhiyong Zong, Yohei Doi, Jianzhong Shen, Peiyao Jia, Qianhua Song, Qianhui Zhang, Jun Yang, Xianhui Huang, Minggui Wang, Jian-Hua Liu

Source: mBio, Vol 11, Iss 2 (2020)

Subject Terms: Enterobacteriaceae, antimicrobial agents, efflux pumps, mechanisms of resistance, multidrug resistance, plasmid-mediated resistance, Microbiology, QR1-502

File Description: electronic resource

Relation: https://doaj.org/toc/2150-7511

Access URL: https://doaj.org/article/275a9babc0f443eb9dcb6b4e5a071b96

Ecological effects of cefepime use during antibiotic cycling on the Gram-negative enteric flora of ICU patients

Authors: Carola Venturini, Andrew N. Ginn, Brooke E. Wilson, Guy Tsafnat, Ian Paulsen, Sally R. Partridge, Jonathan R. Iredell

Source: Intensive Care Medicine Experimental, Vol 6, Iss 1, Pp 1-7 (2018)

Subject Terms: Medical emergencies. Critical care. Intensive care. First aid, RC86-88.9

File Description: electronic resource

Relation: http://link.springer.com/article/10.1186/s40635-018-0185-2; https://doaj.org/toc/2197-425X

Access URL: https://doaj.org/article/ae277a722a524a168066e54b7f45db00

Locally Acquired mcr-1 in Escherichia coli, Australia, 2011 and 2013

Authors: Justin A. Ellem, Andrew N. Ginn, Sharon C.-A. Chen, John Ferguson, Sally R. Partridge, Jonathan R. Iredell

Source: Emerging Infectious Diseases, Vol 23, Iss 7, Pp 1160-1163 (2017)

Subject Terms: antimicrobial resistance, colistin, Escherichia coli, plasmid, mcr-1 gene, mobile colistin resistance gene, Medicine, Infectious and parasitic diseases, RC109-216

File Description: electronic resource

Relation: https://wwwnc.cdc.gov/eid/article/23/7/16-1638_article; https://doaj.org/toc/1080-6040; https://doaj.org/toc/1080-6059

Access URL: https://doaj.org/article/c1b1a172f2f94bcf902dcdf203a75906

What's in a Name? ISSwi1 Corresponds to Transposons Related to Tn2 and Tn3

Authors: Sally R. Partridge

Source: mBio, Vol 6, Iss 5 (2015)

Subject Terms: Microbiology, QR1-502

File Description: electronic resource

Relation: https://doaj.org/toc/2150-7511

Access URL: https://doaj.org/article/b6c9c9ce6d284b22b7d98e6f1206df48

Plasmid interference for curing antibiotic resistance plasmids in vivo.

Authors: Muhammad Kamruzzaman, Shereen Shoma, Christopher M Thomas, Sally R Partridge, Jonathan R Iredell

Source: PLoS ONE, Vol 12, Iss 2, p e0172913 (2017)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: http://europepmc.org/articles/PMC5330492?pdf=render; https://doaj.org/toc/1932-6203

Access URL: https://doaj.org/article/608e1c9cc0a34fe3b225ca7e5ebdd12d

MALDI-TOF Mass Spectrometry for Multilocus Sequence Typing of Escherichia coli Reveals Diversity among Isolates Carrying blaCMY₋₂-Like Genes.

Authors: Kaitlin A Tagg, Andrew N Ginn, Sally R Partridge, Jonathan R Iredell

Source: PLoS ONE, Vol 10, Iss 11, p e0143446 (2015)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: http://europepmc.org/articles/PMC4654469?pdf=render; https://doaj.org/toc/1932-6203

Access URL: https://doaj.org/article/f701d7cc9cec4ec5b761f32eb89b7fb6

The ecology of antibiotic use in the ICU: homogeneous prescribing of cefepime but not tazocin selects for antibiotic resistant infection.

Authors: Andrew N Ginn, Agnieszka M Wiklendt, Heather F Gidding, Narelle George, James S O'Driscoll, Sally R Partridge, Brian I O'Toole, Rita A Perri, Joan Faoagali, John E Gallagher, Jeffrey Lipman, Jonathan R Iredell

Source: PLoS ONE, Vol 7, Iss 6, p e38719 (2012)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: http://europepmc.org/articles/PMC3382621?pdf=render; https://doaj.org/toc/1932-6203

Access URL: https://doaj.org/article/b4ad7132b5174692998cbc20c24a239f