Benchmarking the diagnostic performance of open source LLMs in 1933 Eurorad case reports

Authors: Su Hwan Kim, Severin Schramm, Lisa C. Adams, Rickmer Braren, Keno K. Bressem, Matthias Keicher, Paul-Sören Platzek, Karolin Johanna Paprottka, Claus Zimmer, Dennis M. Hedderich, Benedikt Wiestler

Source: npj Digital Medicine, Vol 8, Iss 1, Pp 1-9 (2025)

Subject Terms: Computer applications to medicine. Medical informatics, R858-859.7

File Description: electronic resource

Relation: https://doaj.org/toc/2398-6352

Access URL: https://doaj.org/article/f77fc250d75444a389803e61b3ab9787

Study protocol of the METAPANC trial - intensified treatment in patients with local operable but oligometastatic pancreatic cancer - multimodal surgical treatment versus chemotherapy alone: a randomized controlled trial

Authors: Michael Ghadimi, Uwe Pelzer, Marc G. Besselink, Jens Siveke, Ralph Telgmann, Rickmer Braren, Hanneke Wilmink, Marie Crede, Alexander Koenig, Ute Koenig, Sven Thorsten Liffers, Kai Antweiler, Bas Uijterwijk, Hanna Seppanen, Arno Nordin, Pauli Puolakkainen, Olav F. Dajani, Knut Jørgen Labori, Mia Johansson, Svein Olav Bratlie, Tim Friede, Peter Jo

Source: BMC Cancer, Vol 25, Iss 1, Pp 1-12 (2025)

Subject Terms: Oligometastasis, Pancreatic ductal carcinoma (PDAC), Oligometastatic pancreatic cancer, Liver metastasis, Multimodal treatment, Chemotherapy, Neoplasms. Tumors. Oncology. Including cancer and carcinogens, RC254-282

File Description: electronic resource

Relation: https://doaj.org/toc/1471-2407

Access URL: https://doaj.org/article/d5d766bd0b564ed9927e21bb8a6e31ad

Using UK Biobank data to establish population-specific atlases from whole body MRI

Authors: Sophie Starck, Vasiliki Sideri-Lampretsa, Jessica J. M. Ritter, Veronika A. Zimmer, Rickmer Braren, Tamara T. Mueller, Daniel Rueckert

Source: Communications Medicine, Vol 4, Iss 1, Pp 1-10 (2024)

Subject Terms: Medicine

File Description: electronic resource

Relation: https://doaj.org/toc/2730-664X

Access URL: https://doaj.org/article/680bf52f740e463bb2b9f6614a5fe195

Unlocking the potential of digital pathology: Novel baselines for compression

Authors: Maximilian Fischer, Peter Neher, Peter Schüffler, Sebastian Ziegler, Shuhan Xiao, Robin Peretzke, David Clunie, Constantin Ulrich, Michael Baumgartner, Alexander Muckenhuber, Silvia Dias Almeida, Michael Gőtz, Jens Kleesiek, Marco Nolden, Rickmer Braren, Klaus Maier-Hein

Source: Journal of Pathology Informatics, Vol 17, Iss , Pp 100421- (2025)

Subject Terms: Whole slide images, Lossy compression, Feature similarity, Computer applications to medicine. Medical informatics, R858-859.7, Pathology, RB1-214

File Description: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S2153353925000033; https://doaj.org/toc/2153-3539

Access URL: https://doaj.org/article/74c8d770d38a44aa80cb852717e4a6fe

Radiomics workflow definition & challenges - German priority program 2177 consensus statement on clinically applied radiomics

Authors: Ralf Floca, Jonas Bohn, Christian Haux, Benedikt Wiestler, Frank G. Zöllner, Annika Reinke, Jakob Weiß, Marco Nolden, Steffen Albert, Thorsten Persigehl, Tobias Norajitra, Bettina Baeßler, Marc Dewey, Rickmer Braren, Martin Büchert, Eva Maria Fallenberg, Norbert Galldiks, Annika Gerken, Michael Götz, Horst K. Hahn, Johannes Haubold, Tobias Haueise, Nils Große Hokamp, Michael Ingrisch, Andra-Iza Iuga, Marco Janoschke, Matthias Jung, Lena Sophie Kiefer, Philipp Lohmann, Jürgen Machann, Jan Hendrik Moltz, Johanna Nattenmüller, Tobias Nonnenmacher, Benedict Oerther, Ahmed E. Othman, Felix Peisen, Fritz Schick, Lale Umutlu, Barbara D. Wichtmann, Wenzhao Zhao, Svenja Caspers, Heinz-Peter Schlemmer, Christopher L. Schlett, Klaus Maier-Hein, Fabian Bamberg

Source: Insights into Imaging, Vol 15, Iss 1, Pp 1-12 (2024)

Subject Terms: Image processing, Computer-assisted, Workflow, Terminology, Consensus development conference, Medical physics. Medical radiology. Nuclear medicine, R895-920

File Description: electronic resource

Relation: https://doaj.org/toc/1869-4101

Access URL: https://doaj.org/article/6a8906e841ea488ea5abe79eaf2c5fc3

Preserving fairness and diagnostic accuracy in private large-scale AI models for medical imaging

Authors: Soroosh Tayebi Arasteh, Alexander Ziller, Christiane Kuhl, Marcus Makowski, Sven Nebelung, Rickmer Braren, Daniel Rueckert, Daniel Truhn, Georgios Kaissis

Source: Communications Medicine, Vol 4, Iss 1, Pp 1-12 (2024)

Subject Terms: Medicine

File Description: electronic resource

Relation: https://doaj.org/toc/2730-664X

Access URL: https://doaj.org/article/5debbebf04fd4e9d94555bf1fa6d9f67

Multimodal graph attention network for COVID-19 outcome prediction

Authors: Matthias Keicher, Hendrik Burwinkel, David Bani-Harouni, Magdalini Paschali, Tobias Czempiel, Egon Burian, Marcus R. Makowski, Rickmer Braren, Nassir Navab, Thomas Wendler

Source: Scientific Reports, Vol 13, Iss 1, Pp 1-14 (2023)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: https://doaj.org/toc/2045-2322

Access URL: https://doaj.org/article/38e0e3b15c7049d4a2d8c23892dc616a

Differentially Private Guarantees for Analytics and Machine Learning on Graphs: A Survey of Results

Authors: Tamara T. Mueller, Dmitrii Usynin, Johannes C. Paetzold, Rickmer Braren, Daniel Rueckert, Georgios Kaissis

Source: The Journal of Privacy and Confidentiality, Vol 14, Iss 1 (2024)

Subject Terms: differential privacy, graph neural networks, graph-structured data, graph analytics, Technology, Social Sciences

File Description: electronic resource

Relation: https://journalprivacyconfidentiality.org/index.php/jpc/article/view/820; https://doaj.org/toc/2575-8527

Access URL: https://doaj.org/article/ee28de016b0448929009cb23292f9b74

A deep learning model enables accurate prediction and quantification of pulmonary edema from chest X-rays

Authors: Dominik Schulz, Sebastian Rasch, Markus Heilmaier, Rami Abbassi, Alexander Poszler, Jörg Ulrich, Manuel Steinhardt, Georgios A. Kaissis, Roland M. Schmid, Rickmer Braren, Tobias Lahmer

Source: Critical Care, Vol 27, Iss 1, Pp 1-4 (2023)

Subject Terms: Pulmonary edema, Transpulmonary thermodilution, TPTD, Extravascular lung water, EVLWI, Chest X-ray, Medical emergencies. Critical care. Intensive care. First aid, RC86-88.9

File Description: electronic resource

Relation: https://doaj.org/toc/1364-8535

Access URL: https://doaj.org/article/d25d726d59194ba085e11a819e301134

Interactive Segmentation for COVID-19 Infection Quantification on Longitudinal CT Scans

Authors: Michelle Xiao-Lin Foo, Seong Tae Kim, Magdalini Paschali, Leili Goli, Egon Burian, Marcus Makowski, Rickmer Braren, Nassir Navab, Thomas Wendler

Source: IEEE Access, Vol 11, Pp 77596-77607 (2023)

Subject Terms: Interactive segmentation, longitudinal segmentation, COVID-19 quantification, Electrical engineering. Electronics. Nuclear engineering, TK1-9971

File Description: electronic resource

Relation: https://ieeexplore.ieee.org/document/10188838/; https://doaj.org/toc/2169-3536

Access URL: https://doaj.org/article/eb1dd4df033a49dd97e7e44c50fe6a43

Functional noninvasive detection of glycolytic pancreatic ductal adenocarcinoma

Authors: Irina Heid, Corinna Münch, Sinan Karakaya, Smiths S. Lueong, Alina M. Winkelkotte, Sven T. Liffers, Laura Godfrey, Phyllis F. Y. Cheung, Konstantinos Savvatakis, Geoffrey J. Topping, Florian Englert, Lukas Kritzner, Martin Grashei, Andrea Tannapfel, Richard Viebahn, Heiner Wolters, Waldemar Uhl, Deepak Vangala, Esther M. M. Smeets, Erik H. J. G. Aarntzen, Daniel Rauh, Wilko Weichert, Jörg D. Hoheisel, Stephan A. Hahn, Franz Schilling, Rickmer Braren, Marija Trajkovic-Arsic, Jens T. Siveke

Source: Cancer & Metabolism, Vol 10, Iss 1, Pp 1-14 (2022)

Subject Terms: Glycolysis, PDAC, Lactate, Molecular subtype, Hyperpolarized magnetic resonance spectroscopy, Neoplasms. Tumors. Oncology. Including cancer and carcinogens, RC254-282

File Description: electronic resource

Relation: https://doaj.org/toc/2049-3002

Access URL: https://doaj.org/article/bde08f1443834615a3f9cb25e23e0e2b

Comparison of Virtual Non-Contrast and True Non-Contrast CT Images Obtained by Dual-Layer Spectral CT in COPD Patients

Authors: Manuel Steinhardt, Alexander W. Marka, Sebastian Ziegelmayer, Marcus Makowski, Rickmer Braren, Markus Graf, Joshua Gawlitza

Source: Bioengineering, Vol 11, Iss 4, p 301 (2024)

Subject Terms: COPD, computed tomography imaging, virtual non-contrast images, true non-contrast images, dual-layer spectral CT, emphysema quantification, Technology, Biology (General), QH301-705.5

File Description: electronic resource

Relation: https://www.mdpi.com/2306-5354/11/4/301; https://doaj.org/toc/2306-5354

Access URL: https://doaj.org/article/713ed132696e41868ebbd8e2c943af33

Angpt2/Tie2 autostimulatory loop controls tumorigenesis

Authors: Ninelia Minaskan Karabid, Tobias Wiedemann, Sebastian Gulde, Hermine Mohr, Renu Chandra Segaran, Julia Geppert, Maria Rohm, Giovanni Vitale, Germano Gaudenzi, Alessandra Dicitore, Donna Pauler Ankerst, Yiyao Chen, Rickmer Braren, Georg Kaissis, Franz Schilling, Mathias Schillmaier, Graeme Eisenhofer, Stephan Herzig, Federico Roncaroli, Jürgen B Honegger, Natalia S Pellegata

Source: EMBO Molecular Medicine, Vol 14, Iss 5, Pp 1-17 (2022)

Subject Terms: angiopoietin 2, anti‐angiopoietin biologicals, PitNETs, tumor/endothelial cell crosstalk, tumor‐bound Tie2, Medicine (General), R5-920, Genetics, QH426-470

File Description: electronic resource

Relation: https://doaj.org/toc/1757-4676; https://doaj.org/toc/1757-4684

Access URL: https://doaj.org/article/c28ccb9ad81b4240bda2ef1d892b654e

A computed tomography vertebral segmentation dataset with anatomical variations and multi-vendor scanner data

Authors: Hans Liebl, David Schinz, Anjany Sekuboyina, Luca Malagutti, Maximilian T. Löffler, Amirhossein Bayat, Malek El Husseini, Giles Tetteh, Katharina Grau, Eva Niederreiter, Thomas Baum, Benedikt Wiestler, Bjoern Menze, Rickmer Braren, Claus Zimmer, Jan S. Kirschke

Source: Scientific Data, Vol 8, Iss 1, Pp 1-7 (2021)

Subject Terms: Science

File Description: electronic resource

Relation: https://doaj.org/toc/2052-4463

Access URL: https://doaj.org/article/700b8e5595af4301b434c41fb2464e97

Correlation of in vivo imaging to morphomolecular pathology in translational research: challenge accepted

Authors: Simone Ballke, Irina Heid, Carolin Mogler, Rickmer Braren, Markus Schwaiger, Wilko Weichert, Katja Steiger

Source: EJNMMI Research, Vol 11, Iss 1, Pp 1-9 (2021)

Subject Terms: In vivo imaging, Experimental pathology, Animal models, Translational research, Medical physics. Medical radiology. Nuclear medicine, R895-920

File Description: electronic resource

Relation: https://doaj.org/toc/2191-219X

Access URL: https://doaj.org/article/76bc99a4499f4e348ef2355c2d4dd0e4

Medical imaging deep learning with differential privacy

Authors: Alexander Ziller, Dmitrii Usynin, Rickmer Braren, Marcus Makowski, Daniel Rueckert, Georgios Kaissis

Source: Scientific Reports, Vol 11, Iss 1, Pp 1-8 (2021)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: https://doaj.org/toc/2045-2322

Access URL: https://doaj.org/article/3af80b8b1cd44f2eab82247961c4d757

SARS-CoV-2 serology increases diagnostic accuracy in CT-suspected, PCR-negative COVID-19 patients during pandemic

Authors: Jochen Schneider, Hrvoje Mijočević, Kurt Ulm, Bernhard Ulm, Simon Weidlich, Silvia Würstle, Kathrin Rothe, Matthias Treiber, Roman Iakoubov, Ulrich Mayr, Tobias Lahmer, Sebastian Rasch, Alexander Herner, Egon Burian, Fabian Lohöfer, Rickmer Braren, Marcus R. Makowski, Roland M. Schmid, Ulrike Protzer, Christoph Spinner, Fabian Geisler

Source: Respiratory Research, Vol 22, Iss 1, Pp 1-10 (2021)

Subject Terms: COVID-19, SARS-CoV-2, Serology, Computed tomography, Efficacy, Accuracy, Diseases of the respiratory system, RC705-779

File Description: electronic resource

Relation: https://doaj.org/toc/1465-993X

Access URL: https://doaj.org/article/77860c5d2654411faac49b33fec1b35d

Federated deep learning for detecting COVID-19 lung abnormalities in CT: a privacy-preserving multinational validation study

Authors: Qi Dou, Tiffany Y. So, Meirui Jiang, Quande Liu, Varut Vardhanabhuti, Georgios Kaissis, Zeju Li, Weixin Si, Heather H. C. Lee, Kevin Yu, Zuxin Feng, Li Dong, Egon Burian, Friederike Jungmann, Rickmer Braren, Marcus Makowski, Bernhard Kainz, Daniel Rueckert, Ben Glocker, Simon C. H. Yu, Pheng Ann Heng

Source: npj Digital Medicine, Vol 4, Iss 1, Pp 1-11 (2021)

Subject Terms: Computer applications to medicine. Medical informatics, R858-859.7

File Description: electronic resource

Relation: https://doaj.org/toc/2398-6352

Access URL: https://doaj.org/article/340f463aed8748e1b87b2603e67e7d80

Hyperpolarized 13C pyruvate magnetic resonance spectroscopy for in vivo metabolic phenotyping of rat HCC

Authors: Elisabeth Bliemsrieder, Georgios Kaissis, Martin Grashei, Geoffrey Topping, Jennifer Altomonte, Christian Hundshammer, Fabian Lohöfer, Irina Heid, Dominik Keim, Selamawit Gebrekidan, Marija Trajkovic-Arsic, Aline Winkelkotte, Katja Steiger, Roman Nawroth, Jens Siveke, Markus Schwaiger, Marcus Makowski, Franz Schilling, Rickmer Braren

Source: Scientific Reports, Vol 11, Iss 1, Pp 1-9 (2021)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: https://doaj.org/toc/2045-2322

Access URL: https://doaj.org/article/e0a491a41dc04952be5b8e9b40040ec7

MCL-1 gains occur with high frequency in lung adenocarcinoma and can be targeted therapeutically

Authors: Enkhtsetseg Munkhbaatar, Michelle Dietzen, Deepti Agrawal, Martina Anton, Moritz Jesinghaus, Melanie Boxberg, Nicole Pfarr, Pidassa Bidola, Sebastian Uhrig, Ulrike Höckendorf, Anna-Lena Meinhardt, Adam Wahida, Irina Heid, Rickmer Braren, Ritu Mishra, Arne Warth, Thomas Muley, Patrina S. P. Poh, Xin Wang, Stefan Fröhling, Katja Steiger, Julia Slotta-Huspenina, Martijn van Griensven, Franz Pfeiffer, Sebastian Lange, Roland Rad, Magda Spella, Georgios T. Stathopoulos, Jürgen Ruland, Florian Bassermann, Wilko Weichert, Andreas Strasser, Caterina Branca, Mathias Heikenwalder, Charles Swanton, Nicholas McGranahan, Philipp J. Jost

Source: Nature Communications, Vol 11, Iss 1, Pp 1-13 (2020)

Subject Terms: Science

File Description: electronic resource

Relation: https://doaj.org/toc/2041-1723

Access URL: https://doaj.org/article/e72e961b8ad54302879663e878f7c62b